Miyakogusa Predicted Gene

Lj1g3v1582550.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1582550.1 Non Characterized Hit- tr|D7LZ75|D7LZ75_ARALL
Putative uncharacterized protein OS=Arabidopsis
lyrata,66.35,2e-18,seg,NULL; no description,Rho GTPase-activating
protein domain; RhoGAP,Rho GTPase-activating protein ,CUFF.27538.1
         (342 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g100580.1 | GTPase-activator protein for Rho-like GTPase f...   277   1e-74
Medtr5g065960.1 | GTPase-activator protein for Rho-like GTPase f...   237   1e-62
Medtr5g089490.1 | GTPase-activator protein for Rho-like GTPase f...    87   3e-17
Medtr5g089490.2 | GTPase-activator protein for Rho-like GTPase f...    87   3e-17

>Medtr3g100580.1 | GTPase-activator protein for Rho-like GTPase
           family protein, putative | HC | chr3:46266743-46256804 |
           20130731
          Length = 888

 Score =  277 bits (708), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 186/354 (52%), Positives = 218/354 (61%), Gaps = 36/354 (10%)

Query: 1   MRAAINDTFPEPNXXXXXXXXXXXXTVASRKTVNRMSSSAVAACMAPLLLRPLLAGECEI 60
           MRAAINDTFPEPN            TVAS K VNRMSSSAVAACMAPLLLRPLLAGECEI
Sbjct: 292 MRAAINDTFPEPNRRLLQRILLMMQTVASHKAVNRMSSSAVAACMAPLLLRPLLAGECEI 351

Query: 61  ENDFDVGGDGSIXXXXXXXXXXXXXXIVITLLEEYNTIFGEGSVSPDIYTDXXXXXXXXX 120
           +NDFDVGGDGSI              IVITLLEEYN+IFGEGSVSPDIYTD         
Sbjct: 352 DNDFDVGGDGSIQLLQAAAAANHAQAIVITLLEEYNSIFGEGSVSPDIYTDTEESGSESE 411

Query: 121 XXXXXXXXXXXXXXXXXXXXXXGSSQESDADDDH------------VSESYSGSGESDVD 168
                                   S + D DD+             VSESY+ +G+S+  
Sbjct: 412 EGTDDDL-----------------SYDEDYDDESIHESDEDEEDDLVSESYTETGDSE-- 452

Query: 169 NTPNKKDHDHXXXXXXXXXXXEENKAKPKLKTKSLEGSPTQPDEFKSCENLASPKKSGYA 228
              N KDHDH           EENK   ++  KS EGSPTQ +  +S ENL SPKK+ Y 
Sbjct: 453 -DYNDKDHDHSNSSTKSSEAGEENKVN-QMSLKSREGSPTQHENTESSENLMSPKKTAYV 510

Query: 229 DHSNKPADIVGELSTDQAALHNSDFPSPTSCIRKSNTISNGPTTRHRIM-GRTAARKNLS 287
           D SNK AD+VGE+ST  A+  +S   SP S ++KS T+SN P  RHR M GRT+ARKNLS
Sbjct: 511 DQSNKAADMVGEVSTVLASKRDSSSRSP-SHMKKSATMSNVPAPRHRTMLGRTSARKNLS 569

Query: 288 MESIDFSVDEDGDGIERLEASKAELQNEIAEEVKANAKLQSHIDDQKKSLHERR 341
           MESIDF ++E+ +  +  EA+K +LQNEIA+EVKAN KLQS I+++KK L ERR
Sbjct: 570 MESIDFPIEEEDEIEKL-EATKTQLQNEIADEVKANEKLQSKINERKKDLQERR 622


>Medtr5g065960.1 | GTPase-activator protein for Rho-like GTPase
           family protein | HC | chr5:27771683-27785143 | 20130731
          Length = 929

 Score =  237 bits (604), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 155/344 (45%), Positives = 194/344 (56%), Gaps = 23/344 (6%)

Query: 1   MRAAINDTFPEPNXXXXXXXXXXXXTVASRKTVNRMSSSAVAACMAPLLLRPLLAGECEI 60
           MR AI DTFPEPN             VASRK  NRMSSSAVAACMAPLLLRPLL G+CEI
Sbjct: 292 MRTAICDTFPEPNRRLLQRILLMMQAVASRKDENRMSSSAVAACMAPLLLRPLLVGDCEI 351

Query: 61  ENDFDVGGDGSIXXXXXXXXXXXXXXIVITLLEEYNTIFGEGSVSP--DIYTDXXXXXXX 118
           ENDFDVGGD S+              IVITLLEEYN+IF EGS SP  D+Y D       
Sbjct: 352 ENDFDVGGDSSLQLLQAAAAANHAQGIVITLLEEYNSIFEEGSSSPGPDMYIDSEDDESE 411

Query: 119 XXXXXXXXXXXXXXXXXXXXXXXXGSSQESDADDDHVSESYSGSGESDVDNTPNKKDHDH 178
                                   GS  + DA D+ VSE+ S +G+S V++  + KDH+ 
Sbjct: 412 SEDDDLSYDDYYDDEQDESIE---GS--DVDASDELVSETNSETGDSAVNDEYDDKDHNI 466

Query: 179 XXXXXXXXXXXEENKAKPKLKTKSLEGSPTQPDEFKSCENLASPKKSGYADHSNKPADIV 238
                      +            LE S  Q ++ KSCEN  S  K+  A+ S KP  I+
Sbjct: 467 SYSSSKSSEVCD-----------YLEVSLPQSEDIKSCENFTSQNKTASANDSTKPTYII 515

Query: 239 GELSTDQAALHNSDFPSPTSCIRKSNTISNGPTTRHR-IMGRTAARKNLSMESIDFSVDE 297
             LS DQ  ++ S+ PS +SC   ++ ISN    R R ++G+    K+LSMESIDF +DE
Sbjct: 516 EGLSPDQTTMNRSNCPSTSSC---NDAISNRKMHRCRTVLGQNHGSKDLSMESIDF-LDE 571

Query: 298 DGDGIERLEASKAELQNEIAEEVKANAKLQSHIDDQKKSLHERR 341
           +   +ERLEA K ELQ +IAEEVK NAKLQS+++ +K++LHERR
Sbjct: 572 NEAEVERLEAVKTELQRQIAEEVKVNAKLQSYVETRKEALHERR 615


>Medtr5g089490.1 | GTPase-activator protein for Rho-like GTPase
           family protein | HC | chr5:38878148-38889392 | 20130731
          Length = 871

 Score = 86.7 bits (213), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 54/104 (51%), Positives = 65/104 (62%)

Query: 1   MRAAINDTFPEPNXXXXXXXXXXXXTVASRKTVNRMSSSAVAACMAPLLLRPLLAGECEI 60
           MR AI +TFPEPN            T+AS   VNRM++SAVAACMAPLLLRPLLAGECE+
Sbjct: 274 MRCAILETFPEPNRRLLQRILKMMHTIASHSNVNRMTASAVAACMAPLLLRPLLAGECEL 333

Query: 61  ENDFDVGGDGSIXXXXXXXXXXXXXXIVITLLEEYNTIFGEGSV 104
           E++FDV GD S               I+ TLLEEY  +F E ++
Sbjct: 334 EDEFDVSGDSSAQLLAAANAANNAQAIITTLLEEYENVFDEENI 377



 Score = 59.7 bits (143), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 33/80 (41%), Positives = 56/80 (70%), Gaps = 1/80 (1%)

Query: 262 KSNTISNGPTTRHRIMGRTAARKNLSMESIDFSVDEDGDGIERLEASKAELQNEIAEEVK 321
           K+++ ++  T R    GR+  RK+ S+ES+D S +E+   I+RLE +K +LQ+ IA+E +
Sbjct: 540 KTSSGTSFSTKRSTFWGRSNPRKSPSVESVDSSGEEEL-AIQRLEIAKNDLQHRIAKEAR 598

Query: 322 ANAKLQSHIDDQKKSLHERR 341
            NA LQ+ ++ +K++LHERR
Sbjct: 599 GNAILQASLERRKQALHERR 618


>Medtr5g089490.2 | GTPase-activator protein for Rho-like GTPase
           family protein | HC | chr5:38878170-38889387 | 20130731
          Length = 880

 Score = 86.7 bits (213), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 54/104 (51%), Positives = 65/104 (62%)

Query: 1   MRAAINDTFPEPNXXXXXXXXXXXXTVASRKTVNRMSSSAVAACMAPLLLRPLLAGECEI 60
           MR AI +TFPEPN            T+AS   VNRM++SAVAACMAPLLLRPLLAGECE+
Sbjct: 274 MRCAILETFPEPNRRLLQRILKMMHTIASHSNVNRMTASAVAACMAPLLLRPLLAGECEL 333

Query: 61  ENDFDVGGDGSIXXXXXXXXXXXXXXIVITLLEEYNTIFGEGSV 104
           E++FDV GD S               I+ TLLEEY  +F E ++
Sbjct: 334 EDEFDVSGDSSAQLLAAANAANNAQAIITTLLEEYENVFDEENI 377



 Score = 59.7 bits (143), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 33/80 (41%), Positives = 56/80 (70%), Gaps = 1/80 (1%)

Query: 262 KSNTISNGPTTRHRIMGRTAARKNLSMESIDFSVDEDGDGIERLEASKAELQNEIAEEVK 321
           K+++ ++  T R    GR+  RK+ S+ES+D S +E+   I+RLE +K +LQ+ IA+E +
Sbjct: 540 KTSSGTSFSTKRSTFWGRSNPRKSPSVESVDSSGEEEL-AIQRLEIAKNDLQHRIAKEAR 598

Query: 322 ANAKLQSHIDDQKKSLHERR 341
            NA LQ+ ++ +K++LHERR
Sbjct: 599 GNAILQASLERRKQALHERR 618