Miyakogusa Predicted Gene

Lj1g3v1582540.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1582540.1 Non Characterized Hit- tr|K4D9A0|K4D9A0_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,75.44,8e-17,RHO/RAC/CDC GTPASE-ACTIVATING PROTEIN,NULL; no
description,Rho GTPase-activating protein domain; Rho,CUFF.27537.1
         (118 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g100580.1 | GTPase-activator protein for Rho-like GTPase f...   211   1e-55
Medtr5g089490.2 | GTPase-activator protein for Rho-like GTPase f...   185   8e-48
Medtr5g089490.1 | GTPase-activator protein for Rho-like GTPase f...   185   9e-48
Medtr5g065960.1 | GTPase-activator protein for Rho-like GTPase f...   184   2e-47

>Medtr3g100580.1 | GTPase-activator protein for Rho-like GTPase
           family protein, putative | HC | chr3:46266743-46256804 |
           20130731
          Length = 888

 Score =  211 bits (538), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 99/118 (83%), Positives = 109/118 (92%)

Query: 1   MEQNGILRNDQNDSIDISLDQLKDRDPPKSTVIGRPILLALEDVDGTPSFLEKALKFIEE 60
           MEQNGI RNDQ DSIDISLDQL +++P KSTVIG PILLALEDVDG+P+FLEKAL FIEE
Sbjct: 153 MEQNGIFRNDQTDSIDISLDQLHEKEPAKSTVIGLPILLALEDVDGSPTFLEKALTFIEE 212

Query: 61  HGASVEGILRQAADVDDVERRVREYEQGKIDFSPDEDAHVIGDCVKHVIRELPSSPVP 118
           HGA VEGILRQAADVDDVERRVREYEQGK+DF+P+EDAHVIGDC+KHV+R L SSPVP
Sbjct: 213 HGARVEGILRQAADVDDVERRVREYEQGKVDFAPNEDAHVIGDCIKHVLRGLLSSPVP 270


>Medtr5g089490.2 | GTPase-activator protein for Rho-like GTPase
           family protein | HC | chr5:38878170-38889387 | 20130731
          Length = 880

 Score =  185 bits (469), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 84/118 (71%), Positives = 101/118 (85%)

Query: 1   MEQNGILRNDQNDSIDISLDQLKDRDPPKSTVIGRPILLALEDVDGTPSFLEKALKFIEE 60
           M  NGI RND  DSID S  Q +D+ P KS V+GRPILLALED+DG PSFLEKAL+F+E+
Sbjct: 134 MGHNGIFRNDTTDSIDGSFHQWRDKRPVKSLVVGRPILLALEDIDGGPSFLEKALRFLEK 193

Query: 61  HGASVEGILRQAADVDDVERRVREYEQGKIDFSPDEDAHVIGDCVKHVIRELPSSPVP 118
           HG  VEGILRQ+ADV++V+RRV+EYEQGK++F  +EDAHV+GDCVKHV+RELPSSPVP
Sbjct: 194 HGTKVEGILRQSADVEEVDRRVQEYEQGKVEFDAEEDAHVVGDCVKHVLRELPSSPVP 251


>Medtr5g089490.1 | GTPase-activator protein for Rho-like GTPase
           family protein | HC | chr5:38878148-38889392 | 20130731
          Length = 871

 Score =  185 bits (469), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 84/118 (71%), Positives = 101/118 (85%)

Query: 1   MEQNGILRNDQNDSIDISLDQLKDRDPPKSTVIGRPILLALEDVDGTPSFLEKALKFIEE 60
           M  NGI RND  DSID S  Q +D+ P KS V+GRPILLALED+DG PSFLEKAL+F+E+
Sbjct: 134 MGHNGIFRNDTTDSIDGSFHQWRDKRPVKSLVVGRPILLALEDIDGGPSFLEKALRFLEK 193

Query: 61  HGASVEGILRQAADVDDVERRVREYEQGKIDFSPDEDAHVIGDCVKHVIRELPSSPVP 118
           HG  VEGILRQ+ADV++V+RRV+EYEQGK++F  +EDAHV+GDCVKHV+RELPSSPVP
Sbjct: 194 HGTKVEGILRQSADVEEVDRRVQEYEQGKVEFDAEEDAHVVGDCVKHVLRELPSSPVP 251


>Medtr5g065960.1 | GTPase-activator protein for Rho-like GTPase
           family protein | HC | chr5:27771683-27785143 | 20130731
          Length = 929

 Score =  184 bits (466), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 87/118 (73%), Positives = 101/118 (85%)

Query: 1   MEQNGILRNDQNDSIDISLDQLKDRDPPKSTVIGRPILLALEDVDGTPSFLEKALKFIEE 60
           M Q+GI R+ Q DS+DI LDQLKD++     V+GRPILLALE+VDGTPSFLEKAL+FIEE
Sbjct: 153 MGQSGIFRSYQADSLDIYLDQLKDKETVNYAVLGRPILLALEEVDGTPSFLEKALRFIEE 212

Query: 61  HGASVEGILRQAADVDDVERRVREYEQGKIDFSPDEDAHVIGDCVKHVIRELPSSPVP 118
           HGA VEGILRQAADV+DVE RVREYEQGK++FS  EDAHV+ DCVKHV+REL S P+P
Sbjct: 213 HGAKVEGILRQAADVEDVENRVREYEQGKVEFSEGEDAHVVADCVKHVLRELRSFPIP 270