Miyakogusa Predicted Gene

Lj1g3v1572510.4
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1572510.4 Non Characterized Hit- tr|H9IYR4|H9IYR4_BOMMO
Uncharacterized protein OS=Bombyx mori PE=4 SV=1,58.11,1e-18,no
description,Divalent ion tolerance protein, CutA; DIVALENT CATION
TOLERANCE CUTA-RELATED,Divalent,CUFF.28024.4
         (175 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g100630.1 | divalent cation tolerance protein, CutA1 famil...   278   2e-75
Medtr3g100630.2 | divalent cation tolerance protein, CutA1 famil...   261   2e-70
Medtr4g010890.1 | transmembrane protein, putative | HC | chr4:25...    59   2e-09

>Medtr3g100630.1 | divalent cation tolerance protein, CutA1 family
           protein | HC | chr3:46290852-46287274 | 20130731
          Length = 182

 Score =  278 bits (711), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 136/157 (86%), Positives = 144/157 (91%), Gaps = 5/157 (3%)

Query: 24  IRRRLPLVGAFCMLTLGLSNFYRPLYSSALKTGSSLAKR-----SYSIRMEGNTNNTTVP 78
           +RRRLP+VGAFCMLTLGL+NFY PLYSSALKT S L+ R     S  IRMEGNTNNTTVP
Sbjct: 20  LRRRLPIVGAFCMLTLGLTNFYTPLYSSALKTESKLSSRFSTKSSNFIRMEGNTNNTTVP 79

Query: 79  SIVVYVTVPNKEAGKKLAESIVKEKLAACVNRVPGIESVYQWQGEIQTDSEELLIIKTRQ 138
           SIVVYVTVPNKEAGKKLAESIV EKLAACVNRVPGIESVYQW+G+IQTDSEELLIIKTRQ
Sbjct: 80  SIVVYVTVPNKEAGKKLAESIVTEKLAACVNRVPGIESVYQWEGKIQTDSEELLIIKTRQ 139

Query: 139 SLLEPLTEHVKANHEYDVPEVISLPITGGNLKYLEWI 175
           SLLE LT+HVKANHEYDVPEVISLPITGGNLKYLEW+
Sbjct: 140 SLLEALTDHVKANHEYDVPEVISLPITGGNLKYLEWL 176


>Medtr3g100630.2 | divalent cation tolerance protein, CutA1 family
           protein | HC | chr3:46290852-46287274 | 20130731
          Length = 174

 Score =  261 bits (667), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 130/152 (85%), Positives = 138/152 (90%), Gaps = 3/152 (1%)

Query: 24  IRRRLPLVGAFCMLTLGLSNFYRPLYSSALKTGSSLAKRSYSIRMEGNTNNTTVPSIVVY 83
           +RRRLP+VGAFCMLTLGL+NFY PL  S L +  S  K S  IRMEGNTNNTTVPSIVVY
Sbjct: 20  LRRRLPIVGAFCMLTLGLTNFYTPL--SKLSSRFS-TKSSNFIRMEGNTNNTTVPSIVVY 76

Query: 84  VTVPNKEAGKKLAESIVKEKLAACVNRVPGIESVYQWQGEIQTDSEELLIIKTRQSLLEP 143
           VTVPNKEAGKKLAESIV EKLAACVNRVPGIESVYQW+G+IQTDSEELLIIKTRQSLLE 
Sbjct: 77  VTVPNKEAGKKLAESIVTEKLAACVNRVPGIESVYQWEGKIQTDSEELLIIKTRQSLLEA 136

Query: 144 LTEHVKANHEYDVPEVISLPITGGNLKYLEWI 175
           LT+HVKANHEYDVPEVISLPITGGNLKYLEW+
Sbjct: 137 LTDHVKANHEYDVPEVISLPITGGNLKYLEWL 168


>Medtr4g010890.1 | transmembrane protein, putative | HC |
           chr4:2528582-2527944 | 20130731
          Length = 85

 Score = 58.9 bits (141), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 39/89 (43%), Positives = 45/89 (50%), Gaps = 35/89 (39%)

Query: 24  IRRRLPLVGAFCMLTLGLSNFYRPLYSSALKTGSSLAKRSYSIRMEGNTNNTTVPSIVVY 83
           +RR LP+VGAF MLTLGLSN + PLYSSALKTGS                          
Sbjct: 22  LRRCLPIVGAFFMLTLGLSNLFTPLYSSALKTGSV------------------------- 56

Query: 84  VTVPNKEAGKKLAESIVKEKLAACVNRVP 112
                +   K L+     +KLAACVNRVP
Sbjct: 57  -----RNWLKALS-----QKLAACVNRVP 75