Miyakogusa Predicted Gene

Lj1g3v1562450.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1562450.1 tr|D7MPH6|D7MPH6_ARALL Transcription factor/
transcription regulator (Fragment) OS=Arabidopsis
lyrat,29.1,9e-17,seg,NULL,CUFF.27536.1
         (359 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g065670.1 | transcription factor | HC | chr5:27629590-2762...   341   7e-94
Medtr2g009360.2 | transcription factor | HC | chr2:1893844-18901...   104   2e-22
Medtr2g009360.1 | transcription factor | HC | chr2:1893739-18905...   104   2e-22

>Medtr5g065670.1 | transcription factor | HC |
           chr5:27629590-27627190 | 20130731
          Length = 440

 Score =  341 bits (874), Expect = 7e-94,   Method: Compositional matrix adjust.
 Identities = 203/352 (57%), Positives = 242/352 (68%), Gaps = 33/352 (9%)

Query: 34  ANMNPPGVNF----EPNTMPAFGSSALPHLQFGHSYEPHGWFYCLPRFRQGFIPAPSFAA 89
           A MNP G+N          PA+GSSA PH+Q G+S EPHGWFYCLPRFRQGF   P+F +
Sbjct: 96  AAMNP-GINMNMIPRNEAAPAYGSSASPHVQLGNSNEPHGWFYCLPRFRQGFTSPPNFTS 154

Query: 90  EEK-PSADHVKGFRDKIAPCDESSSPQKQFLVVDQTCGRTTVVYSSRFGSPNECLDSWHS 148
           EEK P A H+KGF++ IAP  ES  PQKQFLVVDQT  +TTV+YSSRFGSP ECL SW S
Sbjct: 155 EEKLPPASHLKGFKEDIAPNGESGFPQKQFLVVDQTGDQTTVIYSSRFGSPVECLGSWDS 214

Query: 149 KLYGTNYWSGN-EPSFRRDLNLNLNQMTGPTLADQVDE--NQGTDNESEMHEDTEEINAL 205
           KL G +  +GN EPS RRD+N  +    GPT   +VDE  NQGT+ ESEMHEDTEEINAL
Sbjct: 215 KLNGCSNLNGNDEPSLRRDVNHVIE--VGPTFDYKVDENDNQGTEIESEMHEDTEEINAL 272

Query: 206 LXXXXXXXXXXXXXXXXXVTSTGHSPSTMTTHDNHKTLR--GTAEEVASSA-GKAKKRKL 262
           L                 VTSTGHSPSTMTTH N +  R  GTAEEVASS+ GK KKRKL
Sbjct: 273 L----YSDSDGYSTEDDEVTSTGHSPSTMTTHVNQQPFRIGGTAEEVASSSPGKTKKRKL 328

Query: 263 VD-GYND-DIQVMDTANSLQHKKSPAVG-----DNDAESRCSYGNI-EGS-------GNK 307
            +  Y+D D+Q MDTA+SL+  +   +      D+DAESRCS  N   GS       G+K
Sbjct: 329 FNMAYSDVDVQFMDTASSLKRNRPFDLNRGVDDDDDAESRCSGSNYGRGSPEIGSLTGHK 388

Query: 308 KMKKEKIRDVLSVLESIIPGGKDKNPVMLLEDAISCLKSLKHKAKALGLDAL 359
           KM+KEKI++VLS+L+ I+P GKDK P+ LL++AI CL SLK KA+ALGL+AL
Sbjct: 389 KMRKEKIQNVLSILQCIVPNGKDKEPIQLLDEAIHCLNSLKLKARALGLNAL 440


>Medtr2g009360.2 | transcription factor | HC | chr2:1893844-1890111
           | 20130731
          Length = 344

 Score =  104 bits (259), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 82/257 (31%), Positives = 131/257 (50%), Gaps = 29/257 (11%)

Query: 115 QKQFLVVDQTCGRTTVVYSSRF---GSPNECLDSWHSKLYGTNYWSGNEPSFRRDLNLNL 171
           QK+F++ D++  +T + YS  F    SP     +  ++ Y  N         R   N   
Sbjct: 99  QKKFIIFDRSDKKTRLFYSPVFPLVQSPI-VTTTQFTQAYDVN-------QERHATNFGQ 150

Query: 172 NQMTGPTLADQVDENQGTDNESEMHEDTEEINALLXXXXXXXXXXXXXXXXXVTSTGHSP 231
             +   +L ++ +++   + ESEMHEDTEEINALL                 VTSTGHSP
Sbjct: 151 KHLPKYSLPEESEQDHVVNEESEMHEDTEEINALLCSDDYDSDDDDE-----VTSTGHSP 205

Query: 232 -STMTTHDNHKTLRGTAEEVASSAGKAKKRKLVDG-YNDDIQVMDTANSLQHKKSPAVGD 289
            +   T+   + +  T E+ ASS    K+ KL+DG Y     ++D+A+S++  + P    
Sbjct: 206 LADERTYLIQEQIEDTEEDTASSDWPNKRHKLIDGGYTKLSPLVDSASSVRLNE-PCECV 264

Query: 290 NDAESRCSYG----------NIEGSGNKKMKKEKIRDVLSVLESIIPGGKDKNPVMLLED 339
            DAES+ S G          N    G+ ++KK+KIR+ L +LE + PG K K+P++++++
Sbjct: 265 RDAESKHSDGQMYFARQTEDNSAAVGDIQLKKDKIRETLRILEKLTPGAKGKHPLLVIDE 324

Query: 340 AISCLKSLKHKAKALGL 356
            I  LKSL  +   LG+
Sbjct: 325 TIDYLKSLMSQTGMLGV 341


>Medtr2g009360.1 | transcription factor | HC | chr2:1893739-1890536
           | 20130731
          Length = 344

 Score =  104 bits (259), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 82/257 (31%), Positives = 131/257 (50%), Gaps = 29/257 (11%)

Query: 115 QKQFLVVDQTCGRTTVVYSSRF---GSPNECLDSWHSKLYGTNYWSGNEPSFRRDLNLNL 171
           QK+F++ D++  +T + YS  F    SP     +  ++ Y  N         R   N   
Sbjct: 99  QKKFIIFDRSDKKTRLFYSPVFPLVQSPI-VTTTQFTQAYDVN-------QERHATNFGQ 150

Query: 172 NQMTGPTLADQVDENQGTDNESEMHEDTEEINALLXXXXXXXXXXXXXXXXXVTSTGHSP 231
             +   +L ++ +++   + ESEMHEDTEEINALL                 VTSTGHSP
Sbjct: 151 KHLPKYSLPEESEQDHVVNEESEMHEDTEEINALLCSDDYDSDDDDE-----VTSTGHSP 205

Query: 232 -STMTTHDNHKTLRGTAEEVASSAGKAKKRKLVDG-YNDDIQVMDTANSLQHKKSPAVGD 289
            +   T+   + +  T E+ ASS    K+ KL+DG Y     ++D+A+S++  + P    
Sbjct: 206 LADERTYLIQEQIEDTEEDTASSDWPNKRHKLIDGGYTKLSPLVDSASSVRLNE-PCECV 264

Query: 290 NDAESRCSYG----------NIEGSGNKKMKKEKIRDVLSVLESIIPGGKDKNPVMLLED 339
            DAES+ S G          N    G+ ++KK+KIR+ L +LE + PG K K+P++++++
Sbjct: 265 RDAESKHSDGQMYFARQTEDNSAAVGDIQLKKDKIRETLRILEKLTPGAKGKHPLLVIDE 324

Query: 340 AISCLKSLKHKAKALGL 356
            I  LKSL  +   LG+
Sbjct: 325 TIDYLKSLMSQTGMLGV 341