Miyakogusa Predicted Gene
- Lj1g3v1561430.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v1561430.1 Non Characterized Hit- tr|I1JV48|I1JV48_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.51014 PE,83.43,0,WD AND
TETRATRICOPEPTIDE REPEAT PROTEIN 1,NULL; WD REPEAT DOMAIN-CONTAINING
FAMILY,NULL; WD40,WD40 r,CUFF.27527.1
(336 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr3g100690.1 | transducin/WD-like repeat-protein | HC | chr3:... 604 e-173
Medtr2g093200.1 | transducin/WD-like repeat-protein | HC | chr2:... 153 2e-37
Medtr1g113000.1 | transducin/WD-like repeat-protein | HC | chr1:... 127 1e-29
Medtr1g113000.2 | transducin/WD-like repeat-protein | HC | chr1:... 127 2e-29
Medtr1g113000.3 | transducin/WD-like repeat-protein | HC | chr1:... 127 2e-29
Medtr1338s0010.1 | hypothetical protein | LC | scaffold1338:1861... 79 7e-15
Medtr1g087120.1 | WD40/YVTN repeat containing domain; bromodomai... 54 2e-07
Medtr1g090827.1 | coatomer subunit alpha-like protein | HC | chr... 53 3e-07
Medtr5g035980.1 | transducin/WD40 repeat protein | HC | chr5:156... 52 6e-07
Medtr1g072140.1 | transducin/WD40 repeat protein | HC | chr1:320... 52 7e-07
Medtr2g034500.1 | WD40/YVTN repeat containing domain; bromodomai... 52 8e-07
Medtr4g071130.1 | coatomer subunit alpha-like protein | HC | chr... 52 9e-07
Medtr4g119620.1 | transducin/WD40 repeat protein | HC | chr4:495... 52 1e-06
Medtr4g095058.1 | F-box-like/WD repeat TBL1XR1-like protein | HC... 50 2e-06
Medtr4g095058.2 | F-box-like/WD repeat TBL1XR1-like protein | HC... 50 2e-06
Medtr6g004040.1 | katanin p80 WD40 repeat subunit B1-like protei... 50 3e-06
Medtr5g085250.1 | E3 ubiquitin-protein ligase COP1 | HC | chr5:3... 49 9e-06
Medtr5g016370.1 | transducin family protein/WD-40 repeat protein... 49 9e-06
>Medtr3g100690.1 | transducin/WD-like repeat-protein | HC |
chr3:46335782-46323405 | 20130731
Length = 759
Score = 604 bits (1558), Expect = e-173, Method: Compositional matrix adjust.
Identities = 282/336 (83%), Positives = 311/336 (92%)
Query: 1 MDSVPFRDGNIHKLLQTRYLNTRLDVNHTLQTHSSLIRRLSQDRELEGHLGCVNAVAWNS 60
MDS PF DGNIH++L +RYL++R DVN +LQTHSSLIRRLSQ++ELEGHLGCVNA+AWNS
Sbjct: 1 MDSSPFLDGNIHRILDSRYLHSRPDVNQSLQTHSSLIRRLSQEKELEGHLGCVNAIAWNS 60
Query: 61 TGSMLISGSDDTRINIWSYSSKKLLHSIDTGHSANIFCTKFVPETSDELVVSGAGDAEVR 120
GS+L+SGSDDTRIN+WSY+ +KL+HSIDTGH+ANIFCTKF+PETSDELV SGAGDAEVR
Sbjct: 61 KGSLLVSGSDDTRINVWSYAGQKLVHSIDTGHTANIFCTKFIPETSDELVASGAGDAEVR 120
Query: 121 LFNLSRLSGRGFSDEAIAPFALYQCHSRRVKKLAVENGNPNVVWSASEDGTLRQHDFREG 180
LFN SR+SG G +D I P ALYQCH+RRVKKLAVENGNPNVVWSASEDGTLRQHDFREG
Sbjct: 121 LFNRSRVSGNGLNDNPITPSALYQCHTRRVKKLAVENGNPNVVWSASEDGTLRQHDFREG 180
Query: 181 TTCPPAGSSHQECRNVLLDLRSGAKRSLADPPKQVLALKSCDISSTRPHLLLVGGSDAFA 240
T+CPPAGS QEC NVLLDLR+GAKRSL DPPKQVLALKS DISSTRPHLLLVGGSDAFA
Sbjct: 181 TSCPPAGSPRQECHNVLLDLRNGAKRSLGDPPKQVLALKSFDISSTRPHLLLVGGSDAFA 240
Query: 241 RLYDRRMLPPLSSCRQRMSPPPCVNYFCPMHLSDRGHPSLHLTHVTFSPDGHEVLLSYSG 300
RLYDRRMLPPLSSC +RM PPPCVNYFCPMHLSDRGHPSLHLTHVTFSPDG EVLLSYSG
Sbjct: 241 RLYDRRMLPPLSSCGKRMPPPPCVNYFCPMHLSDRGHPSLHLTHVTFSPDGSEVLLSYSG 300
Query: 301 EHVYLMNVNNAGVNELQYTPEDVSKLMTYSPTINGV 336
EHVYLMNVN+AGVNE+QY+ DVSKLMTYSP++NG+
Sbjct: 301 EHVYLMNVNHAGVNEVQYSSGDVSKLMTYSPSVNGL 336
>Medtr2g093200.1 | transducin/WD-like repeat-protein | HC |
chr2:39711113-39707415 | 20130731
Length = 478
Score = 153 bits (386), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 104/284 (36%), Positives = 147/284 (51%), Gaps = 29/284 (10%)
Query: 28 HTLQTHSSLIRRLSQDRELEGHLGCVNAVAWNSTGSMLISGSDDTRINIWSYSSKKLLHS 87
H L++ LS +LEGH GCVNAV +NSTG +L+SGSDD ++ W++ SK L
Sbjct: 29 HHFYASQVLVKNLSLYAKLEGHEGCVNAVEFNSTGDILVSGSDDRQVMFWNWESKTKLFD 88
Query: 88 IDTGHSANIFCTKFVPETSDELVVSGAGDAEVRLFNLSRLSGRGFSDEAIAPFALYQCHS 147
+GH NIF TK +P T D +V+ AGD +VRL L + GR + H
Sbjct: 89 YPSGHEDNIFQTKIMPFTDDSRIVTSAGDGQVRL-GLVQEDGR-------VNTTMLGKHQ 140
Query: 148 RRVKKLAVENGNPNVVWSASEDGTLRQHDFREGTTCPPAGSSHQECRNVLLDLRSGAKRS 207
V KLAVE G+P++ +S EDG + D R + L S K +
Sbjct: 141 GSVYKLAVEPGSPHIFYSCGEDGFIHHFDLRSNSATK-------------LFCCSSTKGN 187
Query: 208 LADPPKQVLALKSCDISSTRPHLLLVGGSDAFARLYDRRMLPPLSSCRQRMSPPPCVNYF 267
PP ++ L S I S P+ VGGSD +AR+YD R +S + S P VN F
Sbjct: 188 KKQPPGKI-GLNSIVIDSRIPYYFSVGGSDEYARVYDIRKCHWAAS---KDSDQP-VNTF 242
Query: 268 CPMHLSDRGHPSLHLTHVTFSPDGHEVLLSYSGEHVYLMNVNNA 311
CP HL G ++H+T + +S E+L+SY+ + +YL N++
Sbjct: 243 CPHHLI--GSKNVHITGLAYSKSS-ELLVSYNDDLIYLFEKNSS 283
>Medtr1g113000.1 | transducin/WD-like repeat-protein | HC |
chr1:51268763-51264805 | 20130731
Length = 497
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 88/282 (31%), Positives = 133/282 (47%), Gaps = 40/282 (14%)
Query: 30 LQTHSSLIRRLSQDRELEGHLGCVNAVAWNSTGSMLISGSDDTRINIWSYSSKKLLHSID 89
L L+ RL ++L+ H GCVN V +N+ G +L+SGSDD RI +W + + ++ S
Sbjct: 33 LAASEDLVLRLDVFKKLDKHRGCVNTVCFNADGDILLSGSDDRRIILWDWETGRVKLSFH 92
Query: 90 TGHSANIFCTKFVPETSDELVVSGAGDAEVRLFNLSRLSGRGFSDEAIAPFALYQCHSRR 149
+GHS N+F KF+ + D +V+ A D + R L ++ L H R
Sbjct: 93 SGHSNNVFQAKFMSHSYDRSIVTCAADGQARHAQL--------LEDGHVETKLLGKHQGR 144
Query: 150 VKKLAVENGNPNVVWSASEDGTLRQHDFREGT-----TCPPAGSSHQECRNVLLDLRSGA 204
KLA+E G+P++ ++ EDG ++ D R GT TC P S
Sbjct: 145 AHKLAIEPGSPHIFYTCGEDGLVQHFDLRTGTATELFTCKPLKDSWNYM----------- 193
Query: 205 KRSLADPPKQVLALKSCDISSTRPHLLLVGGSDAFARLYDRRMLPPLSSCRQRMSPPPCV 264
V+ L + I P+L V GSD + RL+D R +S P
Sbjct: 194 ---------PVIHLNAIAIDPRNPNLFAVAGSDEYTRLFDIRKYKWDAST--DFGQP--T 240
Query: 265 NYFCPMHLSDRGHPSLHLTHVTFSPDGHEVLLSYSGEHVYLM 306
+YFCP HL G + +T + FS + E+L+SY+ E +YL
Sbjct: 241 DYFCPPHLI--GDERVGITGLAFS-EQRELLVSYNDEFIYLF 279
>Medtr1g113000.2 | transducin/WD-like repeat-protein | HC |
chr1:51268753-51264899 | 20130731
Length = 501
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 88/282 (31%), Positives = 133/282 (47%), Gaps = 40/282 (14%)
Query: 30 LQTHSSLIRRLSQDRELEGHLGCVNAVAWNSTGSMLISGSDDTRINIWSYSSKKLLHSID 89
L L+ RL ++L+ H GCVN V +N+ G +L+SGSDD RI +W + + ++ S
Sbjct: 33 LAASEDLVLRLDVFKKLDKHRGCVNTVCFNADGDILLSGSDDRRIILWDWETGRVKLSFH 92
Query: 90 TGHSANIFCTKFVPETSDELVVSGAGDAEVRLFNLSRLSGRGFSDEAIAPFALYQCHSRR 149
+GHS N+F KF+ + D +V+ A D + R L ++ L H R
Sbjct: 93 SGHSNNVFQAKFMSHSYDRSIVTCAADGQARHAQL--------LEDGHVETKLLGKHQGR 144
Query: 150 VKKLAVENGNPNVVWSASEDGTLRQHDFREGT-----TCPPAGSSHQECRNVLLDLRSGA 204
KLA+E G+P++ ++ EDG ++ D R GT TC P S
Sbjct: 145 AHKLAIEPGSPHIFYTCGEDGLVQHFDLRTGTATELFTCKPLKDSWNYM----------- 193
Query: 205 KRSLADPPKQVLALKSCDISSTRPHLLLVGGSDAFARLYDRRMLPPLSSCRQRMSPPPCV 264
V+ L + I P+L V GSD + RL+D R +S P
Sbjct: 194 ---------PVIHLNAIAIDPRNPNLFAVAGSDEYTRLFDIRKYKWDAST--DFGQP--T 240
Query: 265 NYFCPMHLSDRGHPSLHLTHVTFSPDGHEVLLSYSGEHVYLM 306
+YFCP HL G + +T + FS + E+L+SY+ E +YL
Sbjct: 241 DYFCPPHLI--GDERVGITGLAFS-EQRELLVSYNDEFIYLF 279
>Medtr1g113000.3 | transducin/WD-like repeat-protein | HC |
chr1:51268763-51264805 | 20130731
Length = 529
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 88/282 (31%), Positives = 133/282 (47%), Gaps = 40/282 (14%)
Query: 30 LQTHSSLIRRLSQDRELEGHLGCVNAVAWNSTGSMLISGSDDTRINIWSYSSKKLLHSID 89
L L+ RL ++L+ H GCVN V +N+ G +L+SGSDD RI +W + + ++ S
Sbjct: 33 LAASEDLVLRLDVFKKLDKHRGCVNTVCFNADGDILLSGSDDRRIILWDWETGRVKLSFH 92
Query: 90 TGHSANIFCTKFVPETSDELVVSGAGDAEVRLFNLSRLSGRGFSDEAIAPFALYQCHSRR 149
+GHS N+F KF+ + D +V+ A D + R L ++ L H R
Sbjct: 93 SGHSNNVFQAKFMSHSYDRSIVTCAADGQARHAQL--------LEDGHVETKLLGKHQGR 144
Query: 150 VKKLAVENGNPNVVWSASEDGTLRQHDFREGT-----TCPPAGSSHQECRNVLLDLRSGA 204
KLA+E G+P++ ++ EDG ++ D R GT TC P S
Sbjct: 145 AHKLAIEPGSPHIFYTCGEDGLVQHFDLRTGTATELFTCKPLKDSWNYM----------- 193
Query: 205 KRSLADPPKQVLALKSCDISSTRPHLLLVGGSDAFARLYDRRMLPPLSSCRQRMSPPPCV 264
V+ L + I P+L V GSD + RL+D R +S P
Sbjct: 194 ---------PVIHLNAIAIDPRNPNLFAVAGSDEYTRLFDIRKYKWDAS--TDFGQP--T 240
Query: 265 NYFCPMHLSDRGHPSLHLTHVTFSPDGHEVLLSYSGEHVYLM 306
+YFCP HL G + +T + FS + E+L+SY+ E +YL
Sbjct: 241 DYFCPPHLI--GDERVGITGLAFS-EQRELLVSYNDEFIYLF 279
>Medtr1338s0010.1 | hypothetical protein | LC |
scaffold1338:1861-1128 | 20130731
Length = 125
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 44/73 (60%), Positives = 47/73 (64%), Gaps = 1/73 (1%)
Query: 112 SGAGDAEVRLFNLSRLSGRGFSDEAIAPFA-LYQCHSRRVKKLAVENGNPNVVWSASEDG 170
S G VRLFN S +S G D +I P L HS RVKKLAV GNPNVVWS SEDG
Sbjct: 36 SVKGIFNVRLFNRSCISVNGLDDNSITPSENLPIPHSTRVKKLAVSYGNPNVVWSGSEDG 95
Query: 171 TLRQHDFREGTTC 183
TLR HDF E T+C
Sbjct: 96 TLRHHDFWEDTSC 108
>Medtr1g087120.1 | WD40/YVTN repeat containing domain; bromodomain
protein | HC | chr1:39005297-39023503 | 20130731
Length = 1781
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 99/236 (41%), Gaps = 53/236 (22%)
Query: 28 HTLQTHSSLIRRLSQDRELEGHLGCVNAVAWNSTGSMLISGSDDTRINIWSYSSKKLLHS 87
+ + S++++++ ++L GH V ++ +G +ISGSDD + IWS + L S
Sbjct: 304 YAIAKPSTMVQKMQNIKKLRGHRVAVYCAIFDGSGRYVISGSDDRLVKIWSMETAFCLAS 363
Query: 88 IDTGHSANIFCTKFVPETSDELVVSGAGDAEVRLFNLSRLSGRGFSDEAIAPFALYQCHS 147
GH +I T +++ LV S + D +R++ L G S ++ + H
Sbjct: 364 C-RGHRGDI--TDLAVSSNNVLVASASNDFVIRVWRLP----DGMS------VSVLRGHD 410
Query: 148 RRVKKLAVENGNPNVVW---SASEDGTLRQHDFREGT-----------------TCPPAG 187
V +A + PN V+ SAS+DGT R D R PPA
Sbjct: 411 AAVNTIAF-SPRPNAVYHLLSASDDGTCRIWDARSSQNPCIYVPRPSDAINGKGNAPPAN 469
Query: 188 SSHQECRNVLLDLRSGAKRSLADPPKQVLALKSCDISSTRPHLLLVGGSDAFARLY 243
L S A+R L Q+L C + + + G SD FAR++
Sbjct: 470 ----------LPSSSNAQRGL-----QIL----CCAFNANGTVFVTGSSDTFARVW 506
>Medtr1g090827.1 | coatomer subunit alpha-like protein | HC |
chr1:40855860-40850967 | 20130731
Length = 1216
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 50/88 (56%), Gaps = 3/88 (3%)
Query: 46 LEGHLGCVNAVAWNSTGSMLISGSDDTRINIWSYSSKKLLHSIDTGHSANIFCTKFVPET 105
L GHL + V ++ ++S SDD I IW++ S+ + S+ TGH+ + C F P+
Sbjct: 89 LLGHLDYIRTVQFHHESPWIVSASDDQTIRIWNWQSRTCI-SVLTGHNHYVMCALFHPK- 146
Query: 106 SDELVVSGAGDAEVRLFNLSRLSGRGFS 133
D+LVVS + D VR++++ L + S
Sbjct: 147 -DDLVVSASLDQTVRVWDIGSLKRKSAS 173
>Medtr5g035980.1 | transducin/WD40 repeat protein | HC |
chr5:15642825-15644475 | 20130731
Length = 448
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 70/162 (43%), Gaps = 39/162 (24%)
Query: 46 LEGHLGCVNAVAWNSTGSMLISGSDDTRINIWSYSS----------------KKLLHSID 89
LE H VNA+A N GS+L SG+ D I +W S+ +L
Sbjct: 293 LEKHKSAVNALALNKDGSVLYSGACDRSILVWEKSNSIIRNCSGLDQDPDDENMVLVGAL 352
Query: 90 TGHSANIFCTKFVPETSDELVVSGAGDAEVRLFNLSRLSGRGFSDEAIAPFALYQCHSRR 149
GH+ I C + D+LV SG+ D VRL+ RG +++ A+ Q H +
Sbjct: 353 RGHTKAILCLVVM----DDLVCSGSADNSVRLWK------RGIDEKSYTCLAVLQGHRKA 402
Query: 150 VKKLAV-------------ENGNPNVVWSASEDGTLRQHDFR 178
VK LA+ ++G+ +V+S S D ++ R
Sbjct: 403 VKCLAIADDSKSGKNGGVDDDGSSYLVYSGSLDCDIKVWQIR 444
>Medtr1g072140.1 | transducin/WD40 repeat protein | HC |
chr1:32005480-32003360 | 20130731
Length = 316
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 54/99 (54%), Gaps = 5/99 (5%)
Query: 26 VNHTLQTHSSLIRRLSQDRELEGHLGCVNAVAWNSTGSMLISGSDDTRINIWSYSSKKLL 85
++ TL +SS LS L GH +N +AW+S + S SDD + IW ++ +
Sbjct: 47 LDKTLIIYSSTT--LSLLHRLTGHSEGINDIAWSSDSHYICSASDDKTLRIWDANTGDCV 104
Query: 86 HSIDTGHSANIFCTKFVPETSDELVVSGAGDAEVRLFNL 124
++ GH N+FC F P+++ +VSG+ D VR++ +
Sbjct: 105 KTL-RGHGHNVFCVNFNPQSN--YIVSGSFDETVRVWEV 140
>Medtr2g034500.1 | WD40/YVTN repeat containing domain; bromodomain
protein | HC | chr2:13169883-13184309 | 20130731
Length = 1726
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 77/160 (48%), Gaps = 17/160 (10%)
Query: 28 HTLQTHSSLIRRLSQDRELEGHLGCVNAVAWNSTGSMLISGSDDTRINIWSYSSKKLLHS 87
+ + S++++++ + + GH V ++ +G +I+GSDD + IWS + L S
Sbjct: 219 YAIAKPSTMVQKMQNIKRIRGHCNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYSLAS 278
Query: 88 IDTGHSANIFCTKFVPETSDELVVSGAGDAEVRLFNLSRLSGRGFSDEAIAPFALYQCHS 147
GH +I T +++ LV S + D +R++ L G P ++ + H+
Sbjct: 279 C-RGHVGDI--TDLAVSSNNALVASSSNDYIIRVWRLP----DGL------PISVLRGHT 325
Query: 148 RRVKKLAVENGNPNVVW---SASEDGTLRQHDFREGTTCP 184
V +A + PN V+ S+S+DGT R D R + P
Sbjct: 326 GAVTAIAF-SPRPNAVYQLLSSSDDGTCRIWDARYTHSTP 364
>Medtr4g071130.1 | coatomer subunit alpha-like protein | HC |
chr4:26807943-26801111 | 20130731
Length = 1206
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 49/86 (56%), Gaps = 3/86 (3%)
Query: 46 LEGHLGCVNAVAWNSTGSMLISGSDDTRINIWSYSSKKLLHSIDTGHSANIFCTKFVPET 105
L GHL + V ++ ++S SDD I IW++ S+ + S+ TGH+ + C F P+
Sbjct: 89 LLGHLDYIRTVQFHHENPWIVSASDDQTIRIWNWQSRTCI-SVLTGHNHYVMCASFHPK- 146
Query: 106 SDELVVSGAGDAEVRLFNLSRLSGRG 131
+++VVS + D VR++++ L +
Sbjct: 147 -EDIVVSASLDQTVRVWDIGSLKRKA 171
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 49/86 (56%), Gaps = 5/86 (5%)
Query: 46 LEGHLGCVNAVAWNSTGSMLISGSDDTRINIWSYSSKKLLHSIDT--GHSANIFCTKFVP 103
LEGH VN A++ T +++SG+DD ++ +W + K +DT GH N+ C F
Sbjct: 200 LEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNDTKAWE-VDTLRGHMNNVSCVMF-- 256
Query: 104 ETSDELVVSGAGDAEVRLFNLSRLSG 129
+++VS + D +R+++ ++ +G
Sbjct: 257 HAKQDIIVSNSEDKSIRVWDATKRTG 282
>Medtr4g119620.1 | transducin/WD40 repeat protein | HC |
chr4:49575751-49578750 | 20130731
Length = 326
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 52/85 (61%), Gaps = 3/85 (3%)
Query: 40 LSQDRELEGHLGCVNAVAWNSTGSMLISGSDDTRINIWSYSSKKLLHSIDTGHSANIFCT 99
LS ++ EGH V+ +A++S L+S SDD I +W + L+ ++ GH+ +FC
Sbjct: 68 LSPMQQYEGHQHGVSDLAFSSDSRYLVSASDDKTIRLWDVPTGSLVKTLH-GHTNYVFCV 126
Query: 100 KFVPETSDELVVSGAGDAEVRLFNL 124
F P+++ ++VSG+ D VR++++
Sbjct: 127 NFNPQSN--VIVSGSFDETVRVWDV 149
>Medtr4g095058.1 | F-box-like/WD repeat TBL1XR1-like protein | HC |
chr4:39607610-39623874 | 20130731
Length = 578
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 42/84 (50%), Gaps = 8/84 (9%)
Query: 48 GHLGCVNAVAWNSTGSMLISGSDDTRINIWSYSSKKLLHSIDTGHSANIFCTKFVPE--- 104
GH G VN V W+ TG++L S SDD IWS K LH HS I+ ++ P
Sbjct: 411 GHQGEVNCVKWDPTGTLLASCSDDITAKIWSVKQDKYLHDFRE-HSKEIYTIRWSPTGPG 469
Query: 105 ----TSDELVVSGAGDAEVRLFNL 124
L+ S + D+ V+L+++
Sbjct: 470 TNNPNKKLLLASASFDSTVKLWDI 493
>Medtr4g095058.2 | F-box-like/WD repeat TBL1XR1-like protein | HC |
chr4:39607610-39623829 | 20130731
Length = 576
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 42/84 (50%), Gaps = 8/84 (9%)
Query: 48 GHLGCVNAVAWNSTGSMLISGSDDTRINIWSYSSKKLLHSIDTGHSANIFCTKFVPE--- 104
GH G VN V W+ TG++L S SDD IWS K LH HS I+ ++ P
Sbjct: 409 GHQGEVNCVKWDPTGTLLASCSDDITAKIWSVKQDKYLHDFRE-HSKEIYTIRWSPTGPG 467
Query: 105 ----TSDELVVSGAGDAEVRLFNL 124
L+ S + D+ V+L+++
Sbjct: 468 TNNPNKKLLLASASFDSTVKLWDI 491
>Medtr6g004040.1 | katanin p80 WD40 repeat subunit B1-like protein |
HC | chr6:91770-77124 | 20130731
Length = 760
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 46/88 (52%), Gaps = 3/88 (3%)
Query: 37 IRRLSQDRELEGHLGCVNAVAWNSTGSMLISGSDDTRINIWSYSSKKLLHSIDTGHSANI 96
IR+ +GH VNA+ + G ++SG +D + +W ++ KLLH + H I
Sbjct: 130 IRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKS-HEGQI 188
Query: 97 FCTKFVPETSDELVVSGAGDAEVRLFNL 124
C F P S+ L+ +G+ D V+ ++L
Sbjct: 189 QCIDFHP--SEFLLATGSADRTVKFWDL 214
>Medtr5g085250.1 | E3 ubiquitin-protein ligase COP1 | HC |
chr5:36796022-36807260 | 20130731
Length = 677
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 67/136 (49%), Gaps = 15/136 (11%)
Query: 45 ELEGHLGCVNAVAWNSTG-SMLISGSDDTRINIWSYSSKKLLHSIDTGHSANIFCTKFVP 103
E E H +V ++ T SML+SGSDD ++ +W + + + +ID ANI C K+ P
Sbjct: 460 EYEEHEKRAWSVDFSRTDPSMLVSGSDDCKVKVWCTNQEASVLNIDM--KANICCVKYNP 517
Query: 104 ETSDELVVSGAGDAEVRLFNLSRLSGRGFSDEAIAPFALYQCHSRRVKKLAVENGNPNVV 163
+ + + V G+ D + ++L +S P ++ H + V + + + +
Sbjct: 518 GSGNYIAV-GSADHHIHYYDLRNIS---------RPVHVFSGHKKAVSYVKFLSNDE--L 565
Query: 164 WSASEDGTLRQHDFRE 179
SAS D TLR D ++
Sbjct: 566 ASASTDSTLRLWDVKQ 581
>Medtr5g016370.1 | transducin family protein/WD-40 repeat protein |
HC | chr5:5874227-5866099 | 20130731
Length = 595
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 45/87 (51%), Gaps = 8/87 (9%)
Query: 44 RELEGHLGCVNAVAWNSTGSMLISGSDDTRINIWSYSSKKLLHSIDTGHSANIFCTKFVP 103
+ GH G VN + W+ TGS+L S SDD IWS K +H HS I+ ++ P
Sbjct: 424 KTFAGHQGEVNCIKWDPTGSILASCSDDNTAKIWSMKQDKYIHDFRE-HSKEIYAIRWSP 482
Query: 104 ------ETSDELVVSGAG-DAEVRLFN 123
+ +LV++ A D+ V+L++
Sbjct: 483 TGPGTNNPNKKLVLASASCDSTVKLWD 509