Miyakogusa Predicted Gene

Lj1g3v1560080.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1560080.1 Non Characterized Hit- tr|D7KY94|D7KY94_ARALL
Putative uncharacterized protein OS=Arabidopsis lyrata,39.02,2e-18,
,TC72047.path1.1
         (155 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g100320.1 | mechanosensitive ion channel-like protein | HC...   202   7e-53
Medtr3g100320.2 | mechanosensitive ion channel-like protein | HC...   201   2e-52
Medtr3g100280.1 | mechanosensitive ion channel-like protein | HC...   133   6e-32
Medtr5g032090.1 | mechanosensitive ion channel-like protein | HC...    65   2e-11

>Medtr3g100320.1 | mechanosensitive ion channel-like protein | HC |
           chr3:46127036-46132359 | 20130731
          Length = 591

 Score =  202 bits (515), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 105/156 (67%), Positives = 119/156 (76%), Gaps = 2/156 (1%)

Query: 1   MAYLGSMGLSHGVRLLYTSDRKCSFCQRPLPGDRLCFVTINLSPVSLRQNSSALLFSGLH 60
           MAY GS+ LSH  R  Y S+  CSFC +P  G+RLCFV  N     LR +SSAL+FS LH
Sbjct: 1   MAYSGSIRLSHDFRQ-YISNGSCSFCHKPNSGNRLCFVAFNHQRHGLRVDSSALIFSRLH 59

Query: 61  APLKPVPSRCNVLLCRSVLTPAGGFEAPLVKAATISLSRSYNAIS-RPILLQLIPALGII 119
             +KPVPSRCNVLLC+S L PAGG EAPL+K AT+SL+RS NAIS RPI+LQLIPALGII
Sbjct: 60  VQVKPVPSRCNVLLCQSALVPAGGCEAPLLKVATVSLARSCNAISGRPIMLQLIPALGII 119

Query: 120 GFAFFGLEPFLRLSRVLFLQDRVDRSWKKSSSRYIM 155
           GFA FGLEP LR  R LFLQ+  D+SWKKS SRYIM
Sbjct: 120 GFAIFGLEPLLRRCRALFLQEWNDKSWKKSISRYIM 155


>Medtr3g100320.2 | mechanosensitive ion channel-like protein | HC |
           chr3:46126688-46132690 | 20130731
          Length = 430

 Score =  201 bits (512), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 105/156 (67%), Positives = 119/156 (76%), Gaps = 2/156 (1%)

Query: 1   MAYLGSMGLSHGVRLLYTSDRKCSFCQRPLPGDRLCFVTINLSPVSLRQNSSALLFSGLH 60
           MAY GS+ LSH  R  Y S+  CSFC +P  G+RLCFV  N     LR +SSAL+FS LH
Sbjct: 13  MAYSGSIRLSHDFRQ-YISNGSCSFCHKPNSGNRLCFVAFNHQRHGLRVDSSALIFSRLH 71

Query: 61  APLKPVPSRCNVLLCRSVLTPAGGFEAPLVKAATISLSRSYNAIS-RPILLQLIPALGII 119
             +KPVPSRCNVLLC+S L PAGG EAPL+K AT+SL+RS NAIS RPI+LQLIPALGII
Sbjct: 72  VQVKPVPSRCNVLLCQSALVPAGGCEAPLLKVATVSLARSCNAISGRPIMLQLIPALGII 131

Query: 120 GFAFFGLEPFLRLSRVLFLQDRVDRSWKKSSSRYIM 155
           GFA FGLEP LR  R LFLQ+  D+SWKKS SRYIM
Sbjct: 132 GFAIFGLEPLLRRCRALFLQEWNDKSWKKSISRYIM 167


>Medtr3g100280.1 | mechanosensitive ion channel-like protein | HC |
           chr3:46094703-46102000 | 20130731
          Length = 716

 Score =  133 bits (335), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 82/159 (51%), Positives = 104/159 (65%), Gaps = 10/159 (6%)

Query: 1   MAYLGSMGLSHGVRLLYTSDRKCSFCQR-PLPGDRLCFVTINLSPVSLRQNS-SALLFSG 58
           MAY GSM  S  VRL  +++   SF    P    RL  VT NL P +L+Q+S S  L   
Sbjct: 12  MAYPGSMQFSRDVRLKTSNNGPRSFQHHNPARVGRLHLVTTNLLPRTLKQDSLSHHLLRI 71

Query: 59  LHAPLKPVPSRCNVLLCRSVLTPAGGFEA-PLVKAATISLSRSYNAI-SRPILLQLIPAL 116
            HAP     SRC+V +CRS + P GG     L+K+A++ L+RSY+++   PILL+LIPAL
Sbjct: 72  RHAP-----SRCSVFVCRSAILPGGGGSGTALIKSASVLLTRSYDSLLGSPILLRLIPAL 126

Query: 117 GIIGFAFFGLEPFLRLSRVLFLQDRVDRSWKKSSSRYIM 155
           GII FA +G+EP LRLSR+LF Q R D SWKKSSSRY+M
Sbjct: 127 GIIAFAVYGIEPLLRLSRILFFQ-RTDSSWKKSSSRYVM 164


>Medtr5g032090.1 | mechanosensitive ion channel-like protein | HC |
           chr5:13770218-13777530 | 20130731
          Length = 705

 Score = 65.5 bits (158), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 51/158 (32%), Positives = 80/158 (50%), Gaps = 9/158 (5%)

Query: 1   MAYLGSMGLSHGVRLLYTSDRKCSFCQRPLPGDRLCFVTINLSPVSL-RQNSSALL-FSG 58
           MA  GS+ LSHG+ L    +   S   R + G   C + ++  P+ L +Q+   L     
Sbjct: 1   MALPGSLQLSHGLGLCRNLN---SNKDRRVKGR--CKLQLDNLPLQLMKQDYRGLQHLHH 55

Query: 59  LHAPLKPVPSRCNVLLCRSVLTPAGGFEAPLVKAATISLSRSYNAI-SRPILLQLIPALG 117
           ++     +  +     C   L P        VK AT  L+R  N + + P++++LIPA+G
Sbjct: 56  INRSTHRLSRKSRSFKCHCFLVPGERIALSSVKVATTVLTRCCNVLQNSPVIVKLIPAVG 115

Query: 118 IIGFAFFGLEPFLRLSRVLFLQDRVDRSWKKSSSRYIM 155
           II FA +G+ P    +R LF Q + D SWKKS++ YI+
Sbjct: 116 IIIFAVWGVGPLTFQTRKLFFQ-KSDNSWKKSTTHYIV 152