Miyakogusa Predicted Gene

Lj1g3v1548830.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1548830.1 Non Characterized Hit- tr|I1K9S0|I1K9S0_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.53820
PE,78.99,0,PFTA,Protein prenyltransferase, alpha subunit;
LRR,Leucine-rich repeat; PPTA,Protein prenyltransfera,CUFF.27497.1
         (693 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g100110.1 | RAB geranylgeranyl transferase alpha protein |...  1041   0.0  
Medtr2g098650.1 | protein prenyltransferase alpha subunit repeat...    74   5e-13

>Medtr3g100110.1 | RAB geranylgeranyl transferase alpha protein | HC
           | chr3:45994485-45989935 | 20130731
          Length = 705

 Score = 1041 bits (2691), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 527/714 (73%), Positives = 573/714 (80%), Gaps = 31/714 (4%)

Query: 1   MHGRPRHPSKPEDATALAAKAEKLRSLQSQFLSNHHNRIYSKEALDLSAKLLEANPECYT 60
           MHGRPR P K ED + L+AKAEKL SLQSQFL+NH NRIY+KEALDLSAKLLE NPECYT
Sbjct: 1   MHGRPRKPLKEEDESVLSAKAEKLHSLQSQFLANHQNRIYTKEALDLSAKLLEINPECYT 60

Query: 61  AWNYRKLAVXXXXXXXXXXX-XXXFDEELRVVESALRKNFKSYGAWHHRKWVLSKGHSSV 119
           AWNYRKLAV               FD+EL+VVE+AL+KNFKSYGAWHHRKWVLSKGHSS+
Sbjct: 61  AWNYRKLAVQHNLSESNSDSDASLFDQELKVVENALKKNFKSYGAWHHRKWVLSKGHSSI 120

Query: 120 DNELRLLNGFQKADPRNFHAWNYRRFVAGLMKRSDEDELKYTEEVIGANFSNYSAWHNRS 179
           DNELRLLN FQKAD RNFHAWNYRRFV  LMK SDEDELKYTE+VIG NFSNYSAWHNRS
Sbjct: 121 DNELRLLNDFQKADARNFHAWNYRRFVTALMKISDEDELKYTEKVIGVNFSNYSAWHNRS 180

Query: 180 ALLSDLLKRKAEGYFPKEKVLEEEYEHVHNAIFTDPDDQSGWFYHLWLIDQTVKTDAPLL 239
            LLS L KRKAEG+  KEKVL+EEY++VH+AIFTD DDQSGWFYHLWLIDQTVK DAPLL
Sbjct: 181 VLLSTLFKRKAEGFSHKEKVLQEEYKYVHSAIFTDSDDQSGWFYHLWLIDQTVKNDAPLL 240

Query: 240 VSSWPSDGSNITLNGNNCLHDCGLSLLNSTLSDTGTLPVILYFNQAVEGLNSSSVSVKSE 299
           VSSWPS G+NITLNGNN LH  GLSLLNSTLSDT TLPVIL FNQAVEG+NSS+V VKSE
Sbjct: 241 VSSWPSHGANITLNGNNSLHGSGLSLLNSTLSDTKTLPVILCFNQAVEGVNSSTVVVKSE 300

Query: 300 LIKEDLVWKPLSTINSNTAKVWVAYLKLGNIELQSSKTYXXXXXX--XXXXXXXXXXXXX 357
           L+KEDLVWKPLST NS+TA+VWV YL +GN++LQ SKTY                     
Sbjct: 301 LLKEDLVWKPLSTNNSSTAQVWVVYLNMGNMKLQLSKTYSIEINIGHSMGILSSNGYHYG 360

Query: 358 NPSQVAFKVCAQTAYTDPADQQCGKRTSWKDEDFQKIDHSEEPDSTLCADQIITENHHIP 417
            PSQ+ F+VC QTAYT+P D Q GK TSWKD DF+KIDH EE +  + AD      HHIP
Sbjct: 361 APSQITFEVCVQTAYTEPVDGQRGKLTSWKDNDFRKIDHFEESNPAVSAD------HHIP 414

Query: 418 TKSIWSMEKIDEEITNFRDLLSEYDCKIGKLTLARLLTAFDLLSSQHDKRKCNTEEVLQL 477
           T S W ME IDEEITNF+DL    DCKI KLTLARLL A DLLS QHDKRK +TEEVL+L
Sbjct: 415 TTSNWCMEAIDEEITNFQDL---SDCKIRKLTLARLLIALDLLSPQHDKRKNHTEEVLKL 471

Query: 478 YDDLMKLDPTHSLYYKDERSLVLLQQITSTRRCLLPYCHHYKDATETITGYVCLRLQNLS 537
           Y +LMKLDPTHSLYYKDE SL+LLQQITS+R  L+PYCH+YKDA+ET T YVCLRLQNLS
Sbjct: 472 YTELMKLDPTHSLYYKDEHSLLLLQQITSSRESLIPYCHYYKDASETNTSYVCLRLQNLS 531

Query: 538 LSRMGSIKNLLWVQMLDLSHNELRSIE-------------------GLEAMQLLSCLNLS 578
           LSRMGS +NLLWVQMLDLSHNELRSIE                   GLEAMQLLSCLNLS
Sbjct: 532 LSRMGSFENLLWVQMLDLSHNELRSIEAVTIAFKKLEKGLTVNFLTGLEAMQLLSCLNLS 591

Query: 579 HNKIGSFTALGPLRLIKSLKVLNISYNELGSHSIDTTRYLCSSPLAHTEEFAWDRFETLA 638
           HNK GSFTALGPLRL+KSLKVLNIS NELGSHSIDT RYLCSSPLAH+E FAWDRFE L 
Sbjct: 592 HNKFGSFTALGPLRLLKSLKVLNISCNELGSHSIDTRRYLCSSPLAHSEVFAWDRFEILC 651

Query: 639 GSTRATNFWEAFLIFESMNLTELNITGNAVSDENFRSFIVKVLPTPKWLDGGEL 692
           GS  AT FWEAFLIFES+NLT+LNI GNAV+DENF SFIVKVLPT K L+  EL
Sbjct: 652 GSYSATKFWEAFLIFESLNLTDLNIAGNAVADENFASFIVKVLPTLKLLNDEEL 705


>Medtr2g098650.1 | protein prenyltransferase alpha subunit repeat
           protein | HC | chr2:42227663-42231477 | 20130731
          Length = 333

 Score = 73.9 bits (180), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 53/204 (25%), Positives = 93/204 (45%), Gaps = 15/204 (7%)

Query: 21  AEKLRSLQSQFLSNHHNRIYSKEALDLSAKLLEANPECYTAWNYRKLAVXXXXXXXXXXX 80
           +E+   +   F + +     S  AL L+A+ +  N   YT W++R+              
Sbjct: 42  SEEFSEVMDYFRAVYFANELSSRALSLTAEAISLNAGNYTVWHFRR--------SLLESL 93

Query: 81  XXXFDEELRVVESALRKNFKSYGAWHHRKWVLSK-GHSSVDNELRLLNGFQKADPRNFHA 139
                 E   VE     N K+Y  WHHR+WV  K G  + ++EL         D +++HA
Sbjct: 94  KVDLHVEREFVERVASGNSKNYQIWHHRRWVAEKLGLEARNSELEFTKKILSIDAKHYHA 153

Query: 140 WNYRRFVAGLMKRSDEDELKYTEEVIGANFSNYSAWHNRSALLSDLLKRKAEGYFPKEKV 199
           W++R++V   +    EDEL Y  E++  +  N SAW+ R  +++     ++      + +
Sbjct: 154 WSHRQWVLQTLG-GWEDELNYCSELLAEDIFNNSAWNQRYFVIT-----RSPFLGGIKAM 207

Query: 200 LEEEYEHVHNAIFTDPDDQSGWFY 223
            E E  +   AI + P+++S W Y
Sbjct: 208 RESEVLYTIEAIISYPENESSWRY 231