Miyakogusa Predicted Gene

Lj1g3v1526320.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1526320.2 Non Characterized Hit- tr|I1NVC7|I1NVC7_ORYGL
Uncharacterized protein (Fragment) OS=Oryza
glaberrima,43,4e-18,Multidrug resistance efflux transporter EmrE,NULL;
seg,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY NOT NA,CUFF.27480.2
         (304 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g099780.1 | CRT (chloroquine-resistance transporter)-like ...   341   5e-94
Medtr0028s0090.1 | CRT (chloroquine-resistance transporter)-like...   223   2e-58
Medtr0028s0090.2 | CRT (chloroquine-resistance transporter)-like...   223   2e-58
Medtr5g089340.3 | CRT (chloroquine-resistance transporter)-like ...   214   1e-55
Medtr5g089340.1 | CRT (chloroquine-resistance transporter)-like ...   211   7e-55
Medtr5g089340.2 | CRT (chloroquine-resistance transporter)-like ...   164   8e-41

>Medtr3g099780.1 | CRT (chloroquine-resistance transporter)-like
           transporter, putative | HC | chr3:45782380-45789933 |
           20130731
          Length = 422

 Score =  341 bits (874), Expect = 5e-94,   Method: Compositional matrix adjust.
 Identities = 164/194 (84%), Positives = 178/194 (91%)

Query: 107 NRVLYKLALVPMSDYPFFLAQLTTFGYVAVYFSILYIRYRLGIVTNEMLAIPKWRFLIIG 166
           NRVLYKLALVPMS+YPFFLAQL TFGYV +YFSILYIRYRLGIVTNEMLAIPKWRF +IG
Sbjct: 99  NRVLYKLALVPMSNYPFFLAQLNTFGYVVIYFSILYIRYRLGIVTNEMLAIPKWRFFVIG 158

Query: 167 FLEALGVASGMSAAVMLPGPVIPILNQTYLVWQLMFSTLLLRRRYSINQIAGCLLVAAGV 226
           FLEALG+ SGMSA  +LPGPVIPILNQT+LVWQLMFS L+LRRRYSINQI GCLLVAAGV
Sbjct: 159 FLEALGLVSGMSAGAILPGPVIPILNQTFLVWQLMFSALILRRRYSINQIVGCLLVAAGV 218

Query: 227 VMAVTSGSNTGQMLSKVEFFWPALMIVSAAFQAGASIIKEFVFIDSITRLKHKSLDIFVV 286
           V+A++SGSN GQMLSKV+F WPALMIVS AFQAGASIIKEFVF+DS TRLK KSLDIFVV
Sbjct: 219 VIAISSGSNAGQMLSKVDFVWPALMIVSCAFQAGASIIKEFVFLDSSTRLKQKSLDIFVV 278

Query: 287 NSFGSGFQVWLVMV 300
           NSFGSGFQ   V++
Sbjct: 279 NSFGSGFQALFVLL 292


>Medtr0028s0090.1 | CRT (chloroquine-resistance transporter)-like
           transporter, putative | HC | scaffold0028:25558-37867 |
           20130731
          Length = 432

 Score =  223 bits (568), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 118/195 (60%), Positives = 147/195 (75%)

Query: 107 NRVLYKLALVPMSDYPFFLAQLTTFGYVAVYFSILYIRYRLGIVTNEMLAIPKWRFLIIG 166
           NRVLYKLALVP+  YPFFLAQ +TF YV VYFSILYIRYR GIVT+EMLA+PK  FLI+G
Sbjct: 106 NRVLYKLALVPLKQYPFFLAQFSTFVYVIVYFSILYIRYRAGIVTDEMLAVPKTPFLIVG 165

Query: 167 FLEALGVASGMSAAVMLPGPVIPILNQTYLVWQLMFSTLLLRRRYSINQIAGCLLVAAGV 226
            LEALG A+GM+A  ML G  IPIL+QT+LVWQ++ ST+ L RRY +NQ+ GC LVA GV
Sbjct: 166 LLEALGAATGMAAGAMLSGASIPILSQTFLVWQILLSTIFLGRRYKVNQLLGCFLVAIGV 225

Query: 227 VMAVTSGSNTGQMLSKVEFFWPALMIVSAAFQAGASIIKEFVFIDSITRLKHKSLDIFVV 286
           ++ V SGS  G+ L +   FW  LM+VS  FQA  +++KE +F D+  +LK  SLD+FVV
Sbjct: 226 IITVASGSGAGKSLQEAGIFWSLLMMVSFLFQAADTVLKEVIFSDATQKLKGGSLDLFVV 285

Query: 287 NSFGSGFQVWLVMVM 301
           NSFGS FQ   + ++
Sbjct: 286 NSFGSAFQALFICLL 300


>Medtr0028s0090.2 | CRT (chloroquine-resistance transporter)-like
           transporter, putative | HC | scaffold0028:25558-37826 |
           20130731
          Length = 345

 Score =  223 bits (568), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 118/195 (60%), Positives = 147/195 (75%)

Query: 107 NRVLYKLALVPMSDYPFFLAQLTTFGYVAVYFSILYIRYRLGIVTNEMLAIPKWRFLIIG 166
           NRVLYKLALVP+  YPFFLAQ +TF YV VYFSILYIRYR GIVT+EMLA+PK  FLI+G
Sbjct: 106 NRVLYKLALVPLKQYPFFLAQFSTFVYVIVYFSILYIRYRAGIVTDEMLAVPKTPFLIVG 165

Query: 167 FLEALGVASGMSAAVMLPGPVIPILNQTYLVWQLMFSTLLLRRRYSINQIAGCLLVAAGV 226
            LEALG A+GM+A  ML G  IPIL+QT+LVWQ++ ST+ L RRY +NQ+ GC LVA GV
Sbjct: 166 LLEALGAATGMAAGAMLSGASIPILSQTFLVWQILLSTIFLGRRYKVNQLLGCFLVAIGV 225

Query: 227 VMAVTSGSNTGQMLSKVEFFWPALMIVSAAFQAGASIIKEFVFIDSITRLKHKSLDIFVV 286
           ++ V SGS  G+ L +   FW  LM+VS  FQA  +++KE +F D+  +LK  SLD+FVV
Sbjct: 226 IITVASGSGAGKSLQEAGIFWSLLMMVSFLFQAADTVLKEVIFSDATQKLKGGSLDLFVV 285

Query: 287 NSFGSGFQVWLVMVM 301
           NSFGS FQ   + ++
Sbjct: 286 NSFGSAFQALFICLL 300


>Medtr5g089340.3 | CRT (chloroquine-resistance transporter)-like
           transporter, putative | HC | chr5:38832701-38826925 |
           20130731
          Length = 336

 Score =  214 bits (544), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 109/190 (57%), Positives = 141/190 (74%)

Query: 107 NRVLYKLALVPMSDYPFFLAQLTTFGYVAVYFSILYIRYRLGIVTNEMLAIPKWRFLIIG 166
           NRVLYKLALVP+  YPFFLAQL+TFGYV VYF I+YIR+R GIVT+EML++PK  F++IG
Sbjct: 110 NRVLYKLALVPLKQYPFFLAQLSTFGYVIVYFGIMYIRHRAGIVTDEMLSLPKTPFVVIG 169

Query: 167 FLEALGVASGMSAAVMLPGPVIPILNQTYLVWQLMFSTLLLRRRYSINQIAGCLLVAAGV 226
            LEAL  A+GM+A  +L G  IPIL+QT+LVWQ++ S + L RRY +N + GC LV  GV
Sbjct: 170 LLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYKVNHLLGCFLVTIGV 229

Query: 227 VMAVTSGSNTGQMLSKVEFFWPALMIVSAAFQAGASIIKEFVFIDSITRLKHKSLDIFVV 286
           V+ V SG + G  L     FW  LMIVS   QA  +++KE +F+D+  +LK  S+D+FVV
Sbjct: 230 VVTVASGPDAGNSLKDGGLFWSLLMIVSFLLQAADTVLKELIFLDANKKLKGGSVDLFVV 289

Query: 287 NSFGSGFQVW 296
           NS+GS FQV+
Sbjct: 290 NSYGSAFQVY 299


>Medtr5g089340.1 | CRT (chloroquine-resistance transporter)-like
           transporter, putative | HC | chr5:38832701-38826925 |
           20130731
          Length = 437

 Score =  211 bits (537), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 108/195 (55%), Positives = 142/195 (72%)

Query: 107 NRVLYKLALVPMSDYPFFLAQLTTFGYVAVYFSILYIRYRLGIVTNEMLAIPKWRFLIIG 166
           NRVLYKLALVP+  YPFFLAQL+TFGYV VYF I+YIR+R GIVT+EML++PK  F++IG
Sbjct: 110 NRVLYKLALVPLKQYPFFLAQLSTFGYVIVYFGIMYIRHRAGIVTDEMLSLPKTPFVVIG 169

Query: 167 FLEALGVASGMSAAVMLPGPVIPILNQTYLVWQLMFSTLLLRRRYSINQIAGCLLVAAGV 226
            LEAL  A+GM+A  +L G  IPIL+QT+LVWQ++ S + L RRY +N + GC LV  GV
Sbjct: 170 LLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYKVNHLLGCFLVTIGV 229

Query: 227 VMAVTSGSNTGQMLSKVEFFWPALMIVSAAFQAGASIIKEFVFIDSITRLKHKSLDIFVV 286
           V+ V SG + G  L     FW  LMIVS   QA  +++KE +F+D+  +LK  S+D+FVV
Sbjct: 230 VVTVASGPDAGNSLKDGGLFWSLLMIVSFLLQAADTVLKELIFLDANKKLKGGSVDLFVV 289

Query: 287 NSFGSGFQVWLVMVM 301
           NS+GS FQ   + ++
Sbjct: 290 NSYGSAFQALFICLL 304


>Medtr5g089340.2 | CRT (chloroquine-resistance transporter)-like
           transporter, putative | HC | chr5:38831970-38826925 |
           20130731
          Length = 324

 Score =  164 bits (416), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 86/169 (50%), Positives = 118/169 (69%)

Query: 133 YVAVYFSILYIRYRLGIVTNEMLAIPKWRFLIIGFLEALGVASGMSAAVMLPGPVIPILN 192
           YV VYF I+YIR+R GIVT+EML++PK  F++IG LEAL  A+GM+A  +L G  IPIL+
Sbjct: 23  YVIVYFGIMYIRHRAGIVTDEMLSLPKTPFVVIGLLEALAAATGMAAGAILSGASIPILS 82

Query: 193 QTYLVWQLMFSTLLLRRRYSINQIAGCLLVAAGVVMAVTSGSNTGQMLSKVEFFWPALMI 252
           QT+LVWQ++ S + L RRY +N + GC LV  GVV+ V SG + G  L     FW  LMI
Sbjct: 83  QTFLVWQILLSIIFLGRRYKVNHLLGCFLVTIGVVVTVASGPDAGNSLKDGGLFWSLLMI 142

Query: 253 VSAAFQAGASIIKEFVFIDSITRLKHKSLDIFVVNSFGSGFQVWLVMVM 301
           VS   QA  +++KE +F+D+  +LK  S+D+FVVNS+GS FQ   + ++
Sbjct: 143 VSFLLQAADTVLKELIFLDANKKLKGGSVDLFVVNSYGSAFQALFICLL 191