Miyakogusa Predicted Gene

Lj1g3v1464080.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1464080.1 Non Characterized Hit- tr|E1ZMV5|E1ZMV5_CHLVA
Putative uncharacterized protein OS=Chlorella
variabil,38.95,0.000000001,POLYNUCLEOTIDE ADENYLYLTRANSFERASE FAMILY
PROTEIN,NULL; TRNA-NUCLEOTIDYLTRANSFERASE/POLY(A)
POLYMERA,CUFF.27341.1
         (275 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g498785.2 | tRNA nucleotidyltransferase/poly(A) polymerase...   385   e-107
Medtr3g498785.1 | tRNA nucleotidyltransferase/poly(A) polymerase...   384   e-107
Medtr8g099900.1 | tRNA nucleotidyltransferase/poly(A) polymerase...   361   e-100
Medtr8g099900.3 | tRNA nucleotidyltransferase/poly(A) polymerase...   361   e-100
Medtr8g099900.2 | tRNA nucleotidyltransferase/poly(A) polymerase...   360   e-100
Medtr5g023810.1 | tRNA nucleotidyltransferase/poly(A) polymerase...   110   1e-24

>Medtr3g498785.2 | tRNA nucleotidyltransferase/poly(A) polymerase |
           HC | chr3:45158441-45152448 | 20130731
          Length = 530

 Score =  385 bits (989), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 188/253 (74%), Positives = 209/253 (82%)

Query: 17  QDRLLMEINYMLAYGFGEASLRLLWKFGLLDILLPFQAAYFAHHGFQRLDKRTNMXXXXX 76
           + RLLMEINYMLAYG GEASLRLLWKFGLLDILLPFQAAYFAHHGF+R DKRTNM     
Sbjct: 270 KGRLLMEINYMLAYGSGEASLRLLWKFGLLDILLPFQAAYFAHHGFRRRDKRTNMLLSLF 329

Query: 77  XXXXXXXAPNLPCHSSLWVGILALHKTLSDRPRDPLVVASFSLAVHNGGNLLEAVNIARM 136
                  APN PC+ SLW  ILALHK LSDRPRDPLVVA+FSLAVHNGGNLLEAVNIA M
Sbjct: 330 SNLDKLLAPNRPCYGSLWFAILALHKALSDRPRDPLVVAAFSLAVHNGGNLLEAVNIAGM 389

Query: 137 ISNPHYVRFPELLDPSGLDAKALEDETLELAESIQGTLLQMTDQYFVSKALADYPQAPHS 196
           I+  H +RFPELLDPSG+DAKALE    +LAESI+GTLLQMTD++FVS+A+ADYPQAPHS
Sbjct: 390 INKAHDMRFPELLDPSGMDAKALEAGVRDLAESIRGTLLQMTDEHFVSQAMADYPQAPHS 449

Query: 197 DLVIIPLGLYRKTFRIFGCVKRSADKKFLSKQDRNIDYESLAHGNLQETRHVFARIVFDT 256
           DLV IPL LY K F IF CVKRSA K+ LSKQ   IDYESLA+G++QE RHVFARIVFDT
Sbjct: 450 DLVFIPLELYVKVFNIFECVKRSAVKRSLSKQGMKIDYESLANGDIQEIRHVFARIVFDT 509

Query: 257 IYPLHQDQTSLIR 269
           ++PLHQ Q   ++
Sbjct: 510 VFPLHQYQDQALK 522


>Medtr3g498785.1 | tRNA nucleotidyltransferase/poly(A) polymerase |
           HC | chr3:45158396-45153028 | 20130731
          Length = 552

 Score =  384 bits (987), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 188/253 (74%), Positives = 209/253 (82%)

Query: 17  QDRLLMEINYMLAYGFGEASLRLLWKFGLLDILLPFQAAYFAHHGFQRLDKRTNMXXXXX 76
           + RLLMEINYMLAYG GEASLRLLWKFGLLDILLPFQAAYFAHHGF+R DKRTNM     
Sbjct: 292 KGRLLMEINYMLAYGSGEASLRLLWKFGLLDILLPFQAAYFAHHGFRRRDKRTNMLLSLF 351

Query: 77  XXXXXXXAPNLPCHSSLWVGILALHKTLSDRPRDPLVVASFSLAVHNGGNLLEAVNIARM 136
                  APN PC+ SLW  ILALHK LSDRPRDPLVVA+FSLAVHNGGNLLEAVNIA M
Sbjct: 352 SNLDKLLAPNRPCYGSLWFAILALHKALSDRPRDPLVVAAFSLAVHNGGNLLEAVNIAGM 411

Query: 137 ISNPHYVRFPELLDPSGLDAKALEDETLELAESIQGTLLQMTDQYFVSKALADYPQAPHS 196
           I+  H +RFPELLDPSG+DAKALE    +LAESI+GTLLQMTD++FVS+A+ADYPQAPHS
Sbjct: 412 INKAHDMRFPELLDPSGMDAKALEAGVRDLAESIRGTLLQMTDEHFVSQAMADYPQAPHS 471

Query: 197 DLVIIPLGLYRKTFRIFGCVKRSADKKFLSKQDRNIDYESLAHGNLQETRHVFARIVFDT 256
           DLV IPL LY K F IF CVKRSA K+ LSKQ   IDYESLA+G++QE RHVFARIVFDT
Sbjct: 472 DLVFIPLELYVKVFNIFECVKRSAVKRSLSKQGMKIDYESLANGDIQEIRHVFARIVFDT 531

Query: 257 IYPLHQDQTSLIR 269
           ++PLHQ Q   ++
Sbjct: 532 VFPLHQYQDQALK 544


>Medtr8g099900.1 | tRNA nucleotidyltransferase/poly(A) polymerase |
           HC | chr8:40297677-40291464 | 20130731
          Length = 516

 Score =  361 bits (926), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 174/258 (67%), Positives = 206/258 (79%)

Query: 8   LDYLTSLLLQDRLLMEINYMLAYGFGEASLRLLWKFGLLDILLPFQAAYFAHHGFQRLDK 67
           L Y    L + RLLME+NYMLAYG GEASLRLLWKFGLLDILLPFQA YF  HGF+R DK
Sbjct: 259 LSYSILRLDKGRLLMEMNYMLAYGSGEASLRLLWKFGLLDILLPFQALYFVRHGFRRRDK 318

Query: 68  RTNMXXXXXXXXXXXXAPNLPCHSSLWVGILALHKTLSDRPRDPLVVASFSLAVHNGGNL 127
           RTNM            APN PCHSSLWVGILALHK+LSD+PR+PLV+A+FSLAVHNGGNL
Sbjct: 319 RTNMLLSLFFNLDKLLAPNSPCHSSLWVGILALHKSLSDQPRNPLVIAAFSLAVHNGGNL 378

Query: 128 LEAVNIARMISNPHYVRFPELLDPSGLDAKALEDETLELAESIQGTLLQMTDQYFVSKAL 187
           LEAV+IAR I+ PH +RFPEL DP  L+AKALE+E L+L ES++ +LLQMT ++ V++A+
Sbjct: 379 LEAVDIARRINKPHDIRFPELSDPCDLNAKALENEILDLVESVKVSLLQMTSRHSVARAM 438

Query: 188 ADYPQAPHSDLVIIPLGLYRKTFRIFGCVKRSADKKFLSKQDRNIDYESLAHGNLQETRH 247
            DYPQAPHSD+V IPLG+Y K   IF C+K S+ KKFLSK+ R IDYESLA G+L E RH
Sbjct: 439 VDYPQAPHSDMVFIPLGMYLKALSIFDCLKVSSCKKFLSKKSRKIDYESLARGDLPEIRH 498

Query: 248 VFARIVFDTIYPLHQDQT 265
           +FAR+VFDT+YPLH  Q+
Sbjct: 499 LFARVVFDTVYPLHLGQS 516


>Medtr8g099900.3 | tRNA nucleotidyltransferase/poly(A) polymerase |
           HC | chr8:40295437-40291464 | 20130731
          Length = 323

 Score =  361 bits (926), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 174/258 (67%), Positives = 206/258 (79%)

Query: 8   LDYLTSLLLQDRLLMEINYMLAYGFGEASLRLLWKFGLLDILLPFQAAYFAHHGFQRLDK 67
           L Y    L + RLLME+NYMLAYG GEASLRLLWKFGLLDILLPFQA YF  HGF+R DK
Sbjct: 66  LSYSILRLDKGRLLMEMNYMLAYGSGEASLRLLWKFGLLDILLPFQALYFVRHGFRRRDK 125

Query: 68  RTNMXXXXXXXXXXXXAPNLPCHSSLWVGILALHKTLSDRPRDPLVVASFSLAVHNGGNL 127
           RTNM            APN PCHSSLWVGILALHK+LSD+PR+PLV+A+FSLAVHNGGNL
Sbjct: 126 RTNMLLSLFFNLDKLLAPNSPCHSSLWVGILALHKSLSDQPRNPLVIAAFSLAVHNGGNL 185

Query: 128 LEAVNIARMISNPHYVRFPELLDPSGLDAKALEDETLELAESIQGTLLQMTDQYFVSKAL 187
           LEAV+IAR I+ PH +RFPEL DP  L+AKALE+E L+L ES++ +LLQMT ++ V++A+
Sbjct: 186 LEAVDIARRINKPHDIRFPELSDPCDLNAKALENEILDLVESVKVSLLQMTSRHSVARAM 245

Query: 188 ADYPQAPHSDLVIIPLGLYRKTFRIFGCVKRSADKKFLSKQDRNIDYESLAHGNLQETRH 247
            DYPQAPHSD+V IPLG+Y K   IF C+K S+ KKFLSK+ R IDYESLA G+L E RH
Sbjct: 246 VDYPQAPHSDMVFIPLGMYLKALSIFDCLKVSSCKKFLSKKSRKIDYESLARGDLPEIRH 305

Query: 248 VFARIVFDTIYPLHQDQT 265
           +FAR+VFDT+YPLH  Q+
Sbjct: 306 LFARVVFDTVYPLHLGQS 323


>Medtr8g099900.2 | tRNA nucleotidyltransferase/poly(A) polymerase |
           HC | chr8:40297676-40291578 | 20130731
          Length = 457

 Score =  360 bits (925), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 174/258 (67%), Positives = 206/258 (79%)

Query: 8   LDYLTSLLLQDRLLMEINYMLAYGFGEASLRLLWKFGLLDILLPFQAAYFAHHGFQRLDK 67
           L Y    L + RLLME+NYMLAYG GEASLRLLWKFGLLDILLPFQA YF  HGF+R DK
Sbjct: 200 LSYSILRLDKGRLLMEMNYMLAYGSGEASLRLLWKFGLLDILLPFQALYFVRHGFRRRDK 259

Query: 68  RTNMXXXXXXXXXXXXAPNLPCHSSLWVGILALHKTLSDRPRDPLVVASFSLAVHNGGNL 127
           RTNM            APN PCHSSLWVGILALHK+LSD+PR+PLV+A+FSLAVHNGGNL
Sbjct: 260 RTNMLLSLFFNLDKLLAPNSPCHSSLWVGILALHKSLSDQPRNPLVIAAFSLAVHNGGNL 319

Query: 128 LEAVNIARMISNPHYVRFPELLDPSGLDAKALEDETLELAESIQGTLLQMTDQYFVSKAL 187
           LEAV+IAR I+ PH +RFPEL DP  L+AKALE+E L+L ES++ +LLQMT ++ V++A+
Sbjct: 320 LEAVDIARRINKPHDIRFPELSDPCDLNAKALENEILDLVESVKVSLLQMTSRHSVARAM 379

Query: 188 ADYPQAPHSDLVIIPLGLYRKTFRIFGCVKRSADKKFLSKQDRNIDYESLAHGNLQETRH 247
            DYPQAPHSD+V IPLG+Y K   IF C+K S+ KKFLSK+ R IDYESLA G+L E RH
Sbjct: 380 VDYPQAPHSDMVFIPLGMYLKALSIFDCLKVSSCKKFLSKKSRKIDYESLARGDLPEIRH 439

Query: 248 VFARIVFDTIYPLHQDQT 265
           +FAR+VFDT+YPLH  Q+
Sbjct: 440 LFARVVFDTVYPLHLGQS 457


>Medtr5g023810.1 | tRNA nucleotidyltransferase/poly(A) polymerase |
           HC | chr5:9485108-9478063 | 20130731
          Length = 713

 Score =  110 bits (276), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 83/269 (30%), Positives = 135/269 (50%), Gaps = 20/269 (7%)

Query: 15  LLQDRLLMEINYMLAYGFGEASLRLLWKFGLLDILLPFQAAYFAHHGFQRLDKRTNMXXX 74
           L +DR+++E+NYML+YG  E SLRLLWKF LL  LLP QAAY      +   + +NM   
Sbjct: 273 LNKDRMMIEMNYMLSYGAAEPSLRLLWKFKLLQFLLPVQAAYLDEQATKEDAQDSNMLMK 332

Query: 75  XXXXXXXXXAPNLPCHSSLWVGILALHKTLSDRPRDPLVVASFSLAVHNG---GNLLEAV 131
                        P   +LW+G+LA H  L + P+D LVV +F+  +++G   G +  A 
Sbjct: 333 LFFHMDNLVGCGRPSDCTLWIGLLAFHLALVNNPQDALVVWAFASVLYHGDWEGGIKFAK 392

Query: 132 NIARMISNPHYVRFPELLDPSGLDA-KALEDETLELAESIQGTLLQMTDQYFVSKALADY 190
             A+M  N      PE+   S   + + + +   +LA  +  ++  + +   +S++L+ Y
Sbjct: 393 EHAKMSVNFE----PEIKRSSICKSDEDIAEAVTKLASLVIDSIHPLVNIESLSQSLSRY 448

Query: 191 PQAPHSDLVIIPLGLYRKTFR----IFGCVKRSADKKFLSKQDRN--IDYESLAHGNLQE 244
           P  P   +V++   + +KT +    IF  +    D KF   + ++  I+Y+ L  G+  E
Sbjct: 449 PSVPPPHMVLV---VSKKTGKAVSEIFEVL--VNDIKFYKSERKSAKINYDMLGSGHTSE 503

Query: 245 TRHVFARIVFDTIYP-LHQDQTSLIREKC 272
           TR V  +IV  T+   +  D      EKC
Sbjct: 504 TRFVLGKIVLQTMQSGIIGDADGFGTEKC 532