Miyakogusa Predicted Gene

Lj1g3v1454010.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1454010.1 tr|E5GBL8|E5GBL8_CUCME ATP-dependent clp protease
OS=Cucumis melo subsp. melo PE=3 SV=1,92.31,8e-19,seg,NULL; no
description,NULL,NODE_36035_length_440_cov_1652.984131.path1.1
         (52 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g100040.1 | ATP-dependent Clp protease ATP-binding subunit...    62   2e-10
Medtr3g102830.1 | ATP-dependent Clp protease ATP-binding subunit...    60   4e-10
Medtr3g498725.2 | ATP-dependent Clp protease ATP-binding subunit...    59   9e-10
Medtr3g498725.1 | ATP-dependent Clp protease ATP-binding subunit...    59   9e-10
Medtr3g498725.3 | ATP-dependent Clp protease ATP-binding subunit...    59   9e-10

>Medtr8g100040.1 | ATP-dependent Clp protease ATP-binding subunit |
           HC | chr8:40241178-40246683 | 20130731
          Length = 926

 Score = 61.6 bits (148), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 32/52 (61%), Positives = 35/52 (67%)

Query: 1   MRLLEDSMAEKMLAREIKEXXXXXXXXXXXXXXXXLNGSSGTPESLPEALPV 52
           MRLLEDSMAEKMLAREIKE                LNGS+G P+SLP+ALPV
Sbjct: 875 MRLLEDSMAEKMLAREIKEGDSVIVDADSDGNVIVLNGSTGAPDSLPDALPV 926


>Medtr3g102830.1 | ATP-dependent Clp protease ATP-binding subunit |
           HC | chr3:47377876-47383774 | 20130731
          Length = 927

 Score = 60.5 bits (145), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 32/52 (61%), Positives = 34/52 (65%)

Query: 1   MRLLEDSMAEKMLAREIKEXXXXXXXXXXXXXXXXLNGSSGTPESLPEALPV 52
           MRLLED+MAEKMLAREIKE                LNGSSG P SLPE+LPV
Sbjct: 876 MRLLEDNMAEKMLAREIKEGDSVIVDADSDGNVIVLNGSSGAPNSLPESLPV 927


>Medtr3g498725.2 | ATP-dependent Clp protease ATP-binding subunit |
           HC | chr3:45109477-45116986 | 20130731
          Length = 922

 Score = 58.9 bits (141), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 32/52 (61%), Positives = 34/52 (65%)

Query: 1   MRLLEDSMAEKMLAREIKEXXXXXXXXXXXXXXXXLNGSSGTPESLPEALPV 52
           MRLLEDSMAEKMLAREIKE                LNG+SGT ESLPEAL +
Sbjct: 871 MRLLEDSMAEKMLAREIKEGDSVIVDVDSEGNVIVLNGTSGTQESLPEALAI 922


>Medtr3g498725.1 | ATP-dependent Clp protease ATP-binding subunit |
           HC | chr3:45109729-45116929 | 20130731
          Length = 922

 Score = 58.9 bits (141), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 32/52 (61%), Positives = 34/52 (65%)

Query: 1   MRLLEDSMAEKMLAREIKEXXXXXXXXXXXXXXXXLNGSSGTPESLPEALPV 52
           MRLLEDSMAEKMLAREIKE                LNG+SGT ESLPEAL +
Sbjct: 871 MRLLEDSMAEKMLAREIKEGDSVIVDVDSEGNVIVLNGTSGTQESLPEALAI 922


>Medtr3g498725.3 | ATP-dependent Clp protease ATP-binding subunit |
           HC | chr3:45109881-45116929 | 20130731
          Length = 922

 Score = 58.9 bits (141), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 32/52 (61%), Positives = 34/52 (65%)

Query: 1   MRLLEDSMAEKMLAREIKEXXXXXXXXXXXXXXXXLNGSSGTPESLPEALPV 52
           MRLLEDSMAEKMLAREIKE                LNG+SGT ESLPEAL +
Sbjct: 871 MRLLEDSMAEKMLAREIKEGDSVIVDVDSEGNVIVLNGTSGTQESLPEALAI 922