Miyakogusa Predicted Gene

Lj1g3v1442490.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1442490.1 Non Characterized Hit- tr|K4BTE1|K4BTE1_SOLLC
Uncharacterized protein OS=Solanum lycopersicum GN=Sol,51.89,7e-19,no
description,NULL; seg,NULL; HSP20,Alpha crystallin/Hsp20 domain;
HSP20-like chaperones,HSP20-like,gene.g31425.t1.1
         (170 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g098690.1 | hsp20/alpha crystallin family protein | HC | c...   234   3e-62
Medtr1246s0010.1 | hsp20/alpha crystallin family protein | HC | ...    99   2e-21

>Medtr1g098690.1 | hsp20/alpha crystallin family protein | HC |
           chr1:44452807-44453935 | 20130731
          Length = 214

 Score =  234 bits (597), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 125/173 (72%), Positives = 143/173 (82%), Gaps = 6/173 (3%)

Query: 2   FTLTAHLKGYKKDNIDISISVDGTEISVSGEKEVQEMQMIPFKKELKIKGFRKKFKIPDG 61
           FTLTAHLKGYKK+NIDI+I+ DGT+ISVSGEKEVQEMQMIPFKKELKIKGFRKKFKIP+G
Sbjct: 42  FTLTAHLKGYKKENIDININKDGTKISVSGEKEVQEMQMIPFKKELKIKGFRKKFKIPNG 101

Query: 62  VVLDRIKAKYDEEDAALTIVMPKMEMAKGI-SGDGLXXXXXXXXXNKSVIQEAEQSAPEE 120
           VVLD+IKAKY EE+  L IVMPK E+ KG+ SG G+         + S+I+E EQS+ EE
Sbjct: 102 VVLDKIKAKYYEEEEVLRIVMPKTEIVKGVLSGMGIEEVKEEEGAS-SIIEEPEQSSREE 160

Query: 121 VP---DKTEEETAPVKKRGP-KPWKPCPPLYLGGSTLLVSLIFLVIHYIRVRK 169
           V     K+EEE APVKKR P KPW+PCPPL LGGSTLLVS+IFLV+HYIRVRK
Sbjct: 161 VKVTDHKSEEENAPVKKRRPRKPWQPCPPLILGGSTLLVSIIFLVMHYIRVRK 213


>Medtr1246s0010.1 | hsp20/alpha crystallin family protein | HC |
           scaffold1246:1811-770 | 20130731
          Length = 153

 Score = 99.0 bits (245), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 55/96 (57%), Positives = 68/96 (70%), Gaps = 5/96 (5%)

Query: 1   MFTLTAHLKGYKKDNIDISISVDGTEISVSGEKEVQEMQMIPF---KKELKIKGFRKKFK 57
           MF LTAHLKGYK+ +IDI IS DG++IS+SGEK +QEM M+ +   +K + IKGF K FK
Sbjct: 40  MFILTAHLKGYKRISIDIKISKDGSKISISGEKPIQEMIMMGWVMQRKVVDIKGFNKVFK 99

Query: 58  IPDGVVLDRIKAKYDEEDAALTIVMPKMEMAKGISG 93
           IP GV LD+IK  Y+EE+  L I MP     KGI G
Sbjct: 100 IPYGVNLDKIKGNYNEEEWILNIYMP--NFVKGIFG 133