Miyakogusa Predicted Gene
- Lj1g3v1385240.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v1385240.1 tr|Q5EAG3|Q5EAG3_ARATH At5g23610 OS=Arabidopsis
thaliana PE=2 SV=1,30.74,1e-18, ,CUFF.27271.1
(220 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr3g097570.1 | DYAD-like protein | HC | chr3:44730358-4473384... 301 5e-82
>Medtr3g097570.1 | DYAD-like protein | HC | chr3:44730358-44733848 |
20130731
Length = 455
Score = 301 bits (770), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 152/220 (69%), Positives = 180/220 (81%), Gaps = 7/220 (3%)
Query: 1 MQELIAKKQEKNEISMMEMTHKEFVKWRAMTDRRLAEITSSLKGVQGKHDELMIWKTKVE 60
MQELIA+K++K E +MME T KE +KW+A TD RL EI SLK +QGK+ E +IWKT+VE
Sbjct: 243 MQELIAQKEKKTESNMMEKTCKELMKWKAKTDYRLTEIMDSLKNLQGKYGEFVIWKTEVE 302
Query: 61 QQLEEITNKLNDLQAPREGTTFSPPSERWKDWIQGTDWIQSTNLDNVQEDGFATWIGSSE 120
Q L +ITNKLN LQAPR+ TTFSP SE+WKDW++ +TN DN+Q+DG ATWIGSSE
Sbjct: 303 QNLMDITNKLNALQAPRDCTTFSP-SEKWKDWLE------NTNPDNIQDDGLATWIGSSE 355
Query: 121 LINVPQGVVLEDPNSIIPAEPLNEELTYKKSDGTEMVPMGQEEQPNVTPDSSTTVNSKSD 180
L NVPQ LEDP S +P +PLNEELT KKS E++P QE+QPNVTPDSSTTVNSK+D
Sbjct: 356 LFNVPQECFLEDPYSGMPVQPLNEELTNKKSHVEELIPTMQEDQPNVTPDSSTTVNSKAD 415
Query: 181 LDNTLMMYQEMFMDLFKWKEKMEQQLLDVSNTVYGMLTMK 220
+DN+L+M+QEMFMDLFKWKEKMEQQLLDVSNTVYGML MK
Sbjct: 416 VDNSLIMFQEMFMDLFKWKEKMEQQLLDVSNTVYGMLAMK 455