Miyakogusa Predicted Gene

Lj1g3v1385240.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1385240.1 tr|Q5EAG3|Q5EAG3_ARATH At5g23610 OS=Arabidopsis
thaliana PE=2 SV=1,30.74,1e-18, ,CUFF.27271.1
         (220 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g097570.1 | DYAD-like protein | HC | chr3:44730358-4473384...   301   5e-82

>Medtr3g097570.1 | DYAD-like protein | HC | chr3:44730358-44733848 |
           20130731
          Length = 455

 Score =  301 bits (770), Expect = 5e-82,   Method: Compositional matrix adjust.
 Identities = 152/220 (69%), Positives = 180/220 (81%), Gaps = 7/220 (3%)

Query: 1   MQELIAKKQEKNEISMMEMTHKEFVKWRAMTDRRLAEITSSLKGVQGKHDELMIWKTKVE 60
           MQELIA+K++K E +MME T KE +KW+A TD RL EI  SLK +QGK+ E +IWKT+VE
Sbjct: 243 MQELIAQKEKKTESNMMEKTCKELMKWKAKTDYRLTEIMDSLKNLQGKYGEFVIWKTEVE 302

Query: 61  QQLEEITNKLNDLQAPREGTTFSPPSERWKDWIQGTDWIQSTNLDNVQEDGFATWIGSSE 120
           Q L +ITNKLN LQAPR+ TTFSP SE+WKDW++      +TN DN+Q+DG ATWIGSSE
Sbjct: 303 QNLMDITNKLNALQAPRDCTTFSP-SEKWKDWLE------NTNPDNIQDDGLATWIGSSE 355

Query: 121 LINVPQGVVLEDPNSIIPAEPLNEELTYKKSDGTEMVPMGQEEQPNVTPDSSTTVNSKSD 180
           L NVPQ   LEDP S +P +PLNEELT KKS   E++P  QE+QPNVTPDSSTTVNSK+D
Sbjct: 356 LFNVPQECFLEDPYSGMPVQPLNEELTNKKSHVEELIPTMQEDQPNVTPDSSTTVNSKAD 415

Query: 181 LDNTLMMYQEMFMDLFKWKEKMEQQLLDVSNTVYGMLTMK 220
           +DN+L+M+QEMFMDLFKWKEKMEQQLLDVSNTVYGML MK
Sbjct: 416 VDNSLIMFQEMFMDLFKWKEKMEQQLLDVSNTVYGMLAMK 455