Miyakogusa Predicted Gene

Lj1g3v1384100.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1384100.1 Non Characterized Hit- tr|I1J8W6|I1J8W6_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,82.79,0,seg,NULL;
NUCLEOLAR RNA-ASSOCIATED PROTEIN,Nrap protein; Nrap,Nrap
protein,CUFF.27263.1
         (650 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g020190.1 | nucleolar RNA-associated protein, putative | H...  1009   0.0  

>Medtr5g020190.1 | nucleolar RNA-associated protein, putative | HC |
           chr5:7706814-7698408 | 20130731
          Length = 1048

 Score = 1009 bits (2610), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 484/633 (76%), Positives = 547/633 (86%), Gaps = 1/633 (0%)

Query: 8   MNSXXXXXXXXXXXVQINHSPHFTKLVDDTVAAIKASIDTIPDDFKVTADLASSFVKDIG 67
           M+S           VQ++     +K VDD VAAI++SID+IPD++ VTADLA SFV+DIG
Sbjct: 1   MDSMDFKASELLKEVQVDDYSQISKPVDDAVAAIESSIDSIPDNYNVTADLAPSFVRDIG 60

Query: 68  ADKVEFKFKKPSFVKIGGSYSTQTLTRPELNIDLIIRLPKECFHEKDYLNYRYHAXXXXX 127
           ADKVEFKFKKP  ++ GGSYS ++L RPELN+DLIIRLPKECFHEKDYLNYRYHA     
Sbjct: 61  ADKVEFKFKKPLVIQKGGSYSIESLARPELNLDLIIRLPKECFHEKDYLNYRYHAKRCLY 120

Query: 128 XXXXXXXXXXXXXXDRVEWSTMQNEARKPLLNVYPAAKLAEFPGVFVRIIPSAASLFNVQ 187
                          RVEWST+QNEARKP+L VYPAAKL +  G FVRIIPSA  +F++ 
Sbjct: 121 LCLVKKYLEKSPSIGRVEWSTLQNEARKPVLIVYPAAKLVDVDGFFVRIIPSAKDIFSIP 180

Query: 188 KLNLKRNNIHNL-NTGTAIQATPKYNTSILEDMLIEDTEFINNFFLGWKELREVLILLKV 246
           KLN+ RNNIHN  N G+++QATPKYN+SILEDM +EDT+ IN FFLGWK+LRE LILLKV
Sbjct: 181 KLNMTRNNIHNSKNEGSSVQATPKYNSSILEDMYMEDTKLINEFFLGWKQLREALILLKV 240

Query: 247 WARQRSSIYVHDCLNGFLISIILAYLASKQQISKSMKAIEIIRITLNFIATSESWSRGLY 306
           WARQRSSIYVHDCLNGFL+S+ILA+LAS+QQIS+SMKAIEIIRITLNFIATSE+WSRGLY
Sbjct: 241 WARQRSSIYVHDCLNGFLLSVILAHLASRQQISRSMKAIEIIRITLNFIATSETWSRGLY 300

Query: 307 FPKEGPSNITKEERMQLKESFPVVIRHPSGGFNLAFRMSKIGFIQFLNEAALTLKCMEKC 366
           FPKEG  NITKE+RMQLK SFPVV+ HPSG FNLAFRMS+IGF Q  +EAALTLKCMEKC
Sbjct: 301 FPKEGEGNITKEDRMQLKGSFPVVMCHPSGAFNLAFRMSRIGFSQLQDEAALTLKCMEKC 360

Query: 367 RDGGFEEVFMTKIDCAVKYDYCMRIHLKGKKEVYASGFCLDDECWRLYEEKIHGILAKGL 426
           R GGFEEVFMTKID AVKYDYCMRI+ KG KE+YASGFC+DDECWRLYEEKIH ILAKGL
Sbjct: 361 RGGGFEEVFMTKIDYAVKYDYCMRINFKGNKELYASGFCMDDECWRLYEEKIHAILAKGL 420

Query: 427 NDRAKFIRVMWRNAQCQWSVDEGLSVLDKEPLFVGISVNTLEKAFRMVDIGPDSDNKVEA 486
           NDRAKFIRV+WRNAQCQWSV++GLS+LDKEPLF+GISV+ LEKAFRMVDIGP++++K +A
Sbjct: 421 NDRAKFIRVIWRNAQCQWSVNDGLSILDKEPLFIGISVSDLEKAFRMVDIGPNAESKEQA 480

Query: 487 LEFRKFWGEKAELRRFKDGRIAESTVWESEQWARHLILKRIAEHVLSRHLCLSKENIVVV 546
           LEFRKFWGEK+ELRRFKD RIAESTVWE ++W RHLILK IAEHVLSRHL LSKENIVVV
Sbjct: 481 LEFRKFWGEKSELRRFKDSRIAESTVWECQKWERHLILKNIAEHVLSRHLSLSKENIVVV 540

Query: 547 VDQLDFSLAHGVVEPISYNGKLLEAFDTLSKRLRLIEDLPLKVSSVQPLDSAFRFTSVFP 606
           VDQLDFSLAHG V+PI+++G LLEAFD LSKRLRLIE LPLKVSSVQPLDSAFRFTSVFP
Sbjct: 541 VDQLDFSLAHGAVDPIAHSGNLLEAFDLLSKRLRLIEGLPLKVSSVQPLDSAFRFTSVFP 600

Query: 607 PEPHLLANEKIESLRLNKVVPSCIQPLEVMIQV 639
           PEPHLLANEKI SLRLNK+VPSCIQPLE+MIQ+
Sbjct: 601 PEPHLLANEKIGSLRLNKLVPSCIQPLEIMIQL 633