Miyakogusa Predicted Gene

Lj1g3v1382080.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1382080.1 Non Characterized Hit- tr|B9RHN0|B9RHN0_RICCO
R2r3-myb transcription factor, putative OS=Ricinus
com,44.9,0.000000000003,seg,NULL,CUFF.27261.1
         (153 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g097450.1 | myb transcription factor | HC | chr3:44673726-...    47   6e-06

>Medtr3g097450.1 | myb transcription factor | HC |
           chr3:44673726-44675570 | 20130731
          Length = 297

 Score = 47.4 bits (111), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 47/136 (34%), Positives = 65/136 (47%), Gaps = 19/136 (13%)

Query: 25  FQLV------KI-GNDTVHEDSNSSSGVTIEEASPHHHQQLNLELSIGLPSHQYQNQLAS 77
           FQLV      KI G   V EDSNS++   +      HHQ LNL+LSIGLPS   Q    +
Sbjct: 174 FQLVSGYANTKINGTKLVCEDSNSNNSSGVSSEEAGHHQ-LNLDLSIGLPSSHPQ---IN 229

Query: 78  SSSVKLKHEQQEEPPRINLYQQWCGNVSQGACVCYGLGFQTNQXXXXXXXXXXXXXXXXX 137
              +KL+ +Q ++  +           S G C+C  LGFQ+ Q                 
Sbjct: 230 DEKLKLQQQQGDDEQQETKVI-----TSHGVCLCRNLGFQSTQVCCCNKALGNTVATNVT 284

Query: 138 XXNEDDIFRFYRPMNV 153
              +++I+RFYRPMN+
Sbjct: 285 ---DNNIYRFYRPMNI 297