Miyakogusa Predicted Gene

Lj1g3v1380970.1
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1380970.1 Non Characterized Hit- tr|B9EYH0|B9EYH0_ORYSJ
Putative uncharacterized protein OS=Oryza sativa
subsp,34.07,0.00000000000001,seg,NULL,CUFF.27237.1
         (140 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g097110.1 | hypothetical protein | LC | chr3:44495376-4449...    57   4e-09
Medtr2g079840.1 | hypothetical protein | LC | chr2:33649427-3365...    55   2e-08
Medtr1g035970.1 | hypothetical protein | LC | chr1:13151525-1315...    52   2e-07
Medtr8g031080.1 | hypothetical protein | HC | chr8:11595381-1159...    52   2e-07
Medtr6g033560.1 | hypothetical protein | LC | chr6:10908461-1091...    50   5e-07
Medtr1g036020.1 | hypothetical protein | LC | chr1:13167645-1316...    50   1e-06
Medtr1g046130.1 | hypothetical protein | LC | chr1:17368801-1737...    47   8e-06

>Medtr3g097110.1 | hypothetical protein | LC |
           chr3:44495376-44496438 | 20130731
          Length = 186

 Score = 57.4 bits (137), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 37/106 (34%), Positives = 49/106 (46%), Gaps = 4/106 (3%)

Query: 21  RKGRWTIGRGETTRVSGDPWLWTGEILTNSLQNS----DWKVRELILPQGGGWNKERICR 76
           R  RW IG G++  +   PWL  GE +  ++       D+KV  LI      WN   I +
Sbjct: 22  RYTRWCIGSGDSIPILDGPWLSNGEHIDGNITGGHYVRDFKVSSLISDNSKEWNVPLIQQ 81

Query: 77  IFHPIVALKIPQTPIGLTRNEDMLVWPHEKYGDYSVRSGYHVAKSE 122
           +F   V   I QTP+      D LVW  E+   YSVRS Y +   E
Sbjct: 82  VFCNDVVDVILQTPLFDQVQHDQLVWKVERNECYSVRSAYRLCVEE 127


>Medtr2g079840.1 | hypothetical protein | LC |
           chr2:33649427-33650722 | 20130731
          Length = 305

 Score = 55.1 bits (131), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 32/116 (27%), Positives = 53/116 (45%), Gaps = 15/116 (12%)

Query: 7   WMWKSILEGRNLLMRKGRWTIGRGETTRVSGDPWLWTGEILTNSLQNSDWKVRELILPQG 66
           ++W++IL  R ++    RW++G   +  +  DPWL  GE +       D  + ELI    
Sbjct: 54  YVWRNILRARFIVFGGARWSVGSEFSISILNDPWLSNGECI-------DESIVELIF--- 103

Query: 67  GGWNKERICRIFHPIVALKIPQTPIGLTRNEDMLVWPHEKYGDYSVRSGYHVAKSE 122
                  + ++F   +A KI   P+     +D L+W  EK G Y+V   Y +   E
Sbjct: 104 -----SVVRQVFSVDIAAKILNMPLIAQVQDDRLIWKAEKNGRYTVCGAYRLCIDE 154


>Medtr1g035970.1 | hypothetical protein | LC |
           chr1:13151525-13150474 | 20130731
          Length = 213

 Score = 52.0 bits (123), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 31/121 (25%), Positives = 52/121 (42%), Gaps = 29/121 (23%)

Query: 6   SWMWKSILEGRNLLMRKGRWTIGRGETTRVSGDPWLWTGEILTNSLQNSDW----KVREL 61
           S++W+ IL  R ++ R  RW+IG   T  + G+PW+  GE +  ++  + +     +  L
Sbjct: 10  SYVWRRILRARFIVCRGVRWSIGADGTIPILGEPWVLNGECIDTNIVVAQYVRHVTIENL 69

Query: 62  ILPQGGGWNKERICRIFHPIVALKIPQTPIGLTRNEDMLVWPHEKYGDYSVRSGYHVAKS 121
           I+P    WN+                          D L+W  EK+G YS +  Y +   
Sbjct: 70  IVPTEKRWNE-------------------------SDRLIWKAEKHGKYSPKIAYRLCVE 104

Query: 122 E 122
           E
Sbjct: 105 E 105


>Medtr8g031080.1 | hypothetical protein | HC |
           chr8:11595381-11593899 | 20130731
          Length = 398

 Score = 51.6 bits (122), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 43/89 (48%), Gaps = 4/89 (4%)

Query: 38  DPWLWTG----EILTNSLQNSDWKVRELILPQGGGWNKERICRIFHPIVALKIPQTPIGL 93
           +PW+  G        ++L    + V  LI      WN+E +  IF    + +I  TP+ L
Sbjct: 72  EPWIEMGLRAPPAAPDALSLQGYSVGHLIHQDTKTWNEEFVRFIFEAGTSQQILDTPLFL 131

Query: 94  TRNEDMLVWPHEKYGDYSVRSGYHVAKSE 122
             NED +VW  EK G YSVRS Y V   E
Sbjct: 132 QVNEDKMVWKPEKNGQYSVRSAYRVCVEE 160


>Medtr6g033560.1 | hypothetical protein | LC |
           chr6:10908461-10910230 | 20130731
          Length = 422

 Score = 50.4 bits (119), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 26/93 (27%), Positives = 50/93 (53%), Gaps = 4/93 (4%)

Query: 30  GETTRVSGDPWLWTGEILTNSLQNS----DWKVRELILPQGGGWNKERICRIFHPIVALK 85
           G +  +  +PWL  GE +++ +  +    ++ +  L+      WN++ I ++F   +  K
Sbjct: 183 GASISILSEPWLHNGEFISSEIPGAPFVQNFIINSLMNFYDKSWNEQVIRQVFSTDITDK 242

Query: 86  IPQTPIGLTRNEDMLVWPHEKYGDYSVRSGYHV 118
           I +TP+     ED ++W  E++G YSVRS Y +
Sbjct: 243 ILRTPLTHQVTEDRIIWKWERHGRYSVRSAYRL 275


>Medtr1g036020.1 | hypothetical protein | LC |
           chr1:13167645-13166578 | 20130731
          Length = 195

 Score = 49.7 bits (117), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 30/116 (25%), Positives = 50/116 (43%), Gaps = 29/116 (25%)

Query: 6   SWMWKSILEGRNLLMRKGRWTIGRGETTRVSGDPWLWTGEILTNSLQNSDW----KVREL 61
           S++W+ IL  R ++ R  RW+IG   T  + G+PW+  GE +  ++  + +     +  L
Sbjct: 16  SYVWRRILRSRFIVCRGVRWSIGADGTFPILGEPWVLNGECIDTNIVVAQYVRHVTIENL 75

Query: 62  ILPQGGGWNKERICRIFHPIVALKIPQTPIGLTRNEDMLVWPHEKYGDYSVRSGYH 117
           I+P    WN+                          D L+W  EK+G YS +  Y 
Sbjct: 76  IVPTEKRWNE-------------------------SDHLIWKAEKHGKYSPKIAYQ 106


>Medtr1g046130.1 | hypothetical protein | LC |
           chr1:17368801-17370737 | 20130731
          Length = 400

 Score = 46.6 bits (109), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 32/123 (26%), Positives = 53/123 (43%), Gaps = 16/123 (13%)

Query: 6   SWMWKSILEGRNLLMRKGRWTIGRGETTRVSGDPWL------WT----GEILTNSLQNSD 55
           S+ W+SI   R + +   RW +G     RV   PW+      W     GE++     N  
Sbjct: 85  SFPWRSIWNARQVFLHGCRWAVGSRTQIRVMQIPWIRGDYGNWVPSPQGEVVYQMYVN-- 142

Query: 56  WKVRELILPQGGGWNKERICRIFHPIVALKIPQTPIGLTRNEDMLVWPHEKYGDYSVRSG 115
               +L+      W+  +I  +F       I +TP+  +   D ++W  E+ G Y V+SG
Sbjct: 143 ----DLVNVGVHTWDSVKIASLFAADTTTAILETPLFDSVISDRILWTAEQDGRYFVKSG 198

Query: 116 YHV 118
           Y +
Sbjct: 199 YRL 201