Miyakogusa Predicted Gene

Lj1g3v1374540.1
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1374540.1 Non Characterized Hit- tr|D7SWI7|D7SWI7_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,37.5,0.000000006, ,CUFF.27226.1
         (225 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g097090.3 | nucleotidyltransferase family protein | HC | c...   118   6e-27
Medtr3g097090.4 | nucleotidyltransferase family protein | HC | c...   117   6e-27
Medtr3g097090.1 | nucleotidyltransferase family protein | HC | c...   117   6e-27
Medtr3g097090.2 | nucleotidyltransferase family protein | HC | c...   117   7e-27

>Medtr3g097090.3 | nucleotidyltransferase family protein | HC |
           chr3:44490299-44481962 | 20130731
          Length = 426

 Score =  118 bits (295), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 96/238 (40%), Positives = 122/238 (51%), Gaps = 27/238 (11%)

Query: 2   DRSQNVARAVGAAKAEIIYRCIHKSLSYLSQFLNDQIQGIELMDLLFGTHTVSTPGAGG- 60
           D SQNVARAV A   + IY+CIH S+ YLS+FLN +IQGIELMD LFG     T G  G 
Sbjct: 168 DLSQNVARAVRAEGFKTIYKCIHNSIDYLSRFLNGEIQGIELMDHLFGKPMAFTLGVEGT 227

Query: 61  -TSNING--NNLPSPENLCPQKKPRLMEGIVENLAKRHSQGNILAQY---------LQGK 108
            TSNING  NN P+  N  P KK R+++    +  +   +G               ++G 
Sbjct: 228 STSNINGNKNNPPTLHNPRPPKKRRIVKNQAGDFHQTEPRGADQVHVPPSSNVPNGVEGT 287

Query: 109 EFQGMGLMQHS-LGKV-------AHNAHASF---LPSVS-YQPPLPAPRSNIEVHHG--P 154
                   +++  GKV         N  ASF   LP +S YQ       ++   HHG  P
Sbjct: 288 STSNTNKNKNTPTGKVHVHPSSNVLNRLASFPPPLPYLSRYQSSFATHSTDFMEHHGYVP 347

Query: 155 GVVPSPFTLQPNASGGSFIPSVQSGIVSFQSFRGGVESLHQEALAPNPWGGSFPPSSL 212
           G VP  F L P    GS+ PS QS  V  Q   G +++ HQ A+A NP+ GSFP SSL
Sbjct: 348 GHVPPHFGLNPAGFQGSYNPSSQSHHVCQQIPGGYLQTFHQNAVASNPYHGSFPHSSL 405


>Medtr3g097090.4 | nucleotidyltransferase family protein | HC |
           chr3:44490299-44481962 | 20130731
          Length = 548

 Score =  117 bits (294), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 96/238 (40%), Positives = 122/238 (51%), Gaps = 27/238 (11%)

Query: 2   DRSQNVARAVGAAKAEIIYRCIHKSLSYLSQFLNDQIQGIELMDLLFGTHTVSTPGAGG- 60
           D SQNVARAV A   + IY+CIH S+ YLS+FLN +IQGIELMD LFG     T G  G 
Sbjct: 290 DLSQNVARAVRAEGFKTIYKCIHNSIDYLSRFLNGEIQGIELMDHLFGKPMAFTLGVEGT 349

Query: 61  -TSNING--NNLPSPENLCPQKKPRLMEGIVENLAKRHSQGNILAQY---------LQGK 108
            TSNING  NN P+  N  P KK R+++    +  +   +G               ++G 
Sbjct: 350 STSNINGNKNNPPTLHNPRPPKKRRIVKNQAGDFHQTEPRGADQVHVPPSSNVPNGVEGT 409

Query: 109 EFQGMGLMQHS-LGKV-------AHNAHASF---LPSVS-YQPPLPAPRSNIEVHHG--P 154
                   +++  GKV         N  ASF   LP +S YQ       ++   HHG  P
Sbjct: 410 STSNTNKNKNTPTGKVHVHPSSNVLNRLASFPPPLPYLSRYQSSFATHSTDFMEHHGYVP 469

Query: 155 GVVPSPFTLQPNASGGSFIPSVQSGIVSFQSFRGGVESLHQEALAPNPWGGSFPPSSL 212
           G VP  F L P    GS+ PS QS  V  Q   G +++ HQ A+A NP+ GSFP SSL
Sbjct: 470 GHVPPHFGLNPAGFQGSYNPSSQSHHVCQQIPGGYLQTFHQNAVASNPYHGSFPHSSL 527


>Medtr3g097090.1 | nucleotidyltransferase family protein | HC |
           chr3:44490299-44481962 | 20130731
          Length = 580

 Score =  117 bits (294), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 96/238 (40%), Positives = 122/238 (51%), Gaps = 27/238 (11%)

Query: 2   DRSQNVARAVGAAKAEIIYRCIHKSLSYLSQFLNDQIQGIELMDLLFGTHTVSTPGAGG- 60
           D SQNVARAV A   + IY+CIH S+ YLS+FLN +IQGIELMD LFG     T G  G 
Sbjct: 322 DLSQNVARAVRAEGFKTIYKCIHNSIDYLSRFLNGEIQGIELMDHLFGKPMAFTLGVEGT 381

Query: 61  -TSNING--NNLPSPENLCPQKKPRLMEGIVENLAKRHSQGNILAQY---------LQGK 108
            TSNING  NN P+  N  P KK R+++    +  +   +G               ++G 
Sbjct: 382 STSNINGNKNNPPTLHNPRPPKKRRIVKNQAGDFHQTEPRGADQVHVPPSSNVPNGVEGT 441

Query: 109 EFQGMGLMQHS-LGKV-------AHNAHASF---LPSVS-YQPPLPAPRSNIEVHHG--P 154
                   +++  GKV         N  ASF   LP +S YQ       ++   HHG  P
Sbjct: 442 STSNTNKNKNTPTGKVHVHPSSNVLNRLASFPPPLPYLSRYQSSFATHSTDFMEHHGYVP 501

Query: 155 GVVPSPFTLQPNASGGSFIPSVQSGIVSFQSFRGGVESLHQEALAPNPWGGSFPPSSL 212
           G VP  F L P    GS+ PS QS  V  Q   G +++ HQ A+A NP+ GSFP SSL
Sbjct: 502 GHVPPHFGLNPAGFQGSYNPSSQSHHVCQQIPGGYLQTFHQNAVASNPYHGSFPHSSL 559


>Medtr3g097090.2 | nucleotidyltransferase family protein | HC |
           chr3:44490299-44481962 | 20130731
          Length = 458

 Score =  117 bits (294), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 96/238 (40%), Positives = 122/238 (51%), Gaps = 27/238 (11%)

Query: 2   DRSQNVARAVGAAKAEIIYRCIHKSLSYLSQFLNDQIQGIELMDLLFGTHTVSTPGAGG- 60
           D SQNVARAV A   + IY+CIH S+ YLS+FLN +IQGIELMD LFG     T G  G 
Sbjct: 200 DLSQNVARAVRAEGFKTIYKCIHNSIDYLSRFLNGEIQGIELMDHLFGKPMAFTLGVEGT 259

Query: 61  -TSNING--NNLPSPENLCPQKKPRLMEGIVENLAKRHSQGNILAQY---------LQGK 108
            TSNING  NN P+  N  P KK R+++    +  +   +G               ++G 
Sbjct: 260 STSNINGNKNNPPTLHNPRPPKKRRIVKNQAGDFHQTEPRGADQVHVPPSSNVPNGVEGT 319

Query: 109 EFQGMGLMQHS-LGKV-------AHNAHASF---LPSVS-YQPPLPAPRSNIEVHHG--P 154
                   +++  GKV         N  ASF   LP +S YQ       ++   HHG  P
Sbjct: 320 STSNTNKNKNTPTGKVHVHPSSNVLNRLASFPPPLPYLSRYQSSFATHSTDFMEHHGYVP 379

Query: 155 GVVPSPFTLQPNASGGSFIPSVQSGIVSFQSFRGGVESLHQEALAPNPWGGSFPPSSL 212
           G VP  F L P    GS+ PS QS  V  Q   G +++ HQ A+A NP+ GSFP SSL
Sbjct: 380 GHVPPHFGLNPAGFQGSYNPSSQSHHVCQQIPGGYLQTFHQNAVASNPYHGSFPHSSL 437