Miyakogusa Predicted Gene

Lj1g3v1362060.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1362060.1 Non Characterized Hit- tr|G7JC78|G7JC78_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,68.35,6e-19,seg,NULL,CUFF.27166.1
         (181 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g096890.1 | transmembrane protein, putative | HC | chr3:44...   198   2e-51
Medtr3g096890.3 | transmembrane protein, putative | HC | chr3:44...   197   3e-51
Medtr8g094540.1 | transmembrane protein, putative | HC | chr8:39...   163   8e-41
Medtr3g096890.2 | transmembrane protein, putative | HC | chr3:44...    91   6e-19
Medtr1g100800.1 | plant/K24M7-17 protein | HC | chr1:45250592-45...    63   2e-10

>Medtr3g096890.1 | transmembrane protein, putative | HC |
           chr3:44344524-44342621 | 20130731
          Length = 333

 Score =  198 bits (503), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 110/178 (61%), Positives = 125/178 (70%), Gaps = 19/178 (10%)

Query: 1   MSGVTLAVDRSSVPQQRDXXXXXXXXXXXXXXXXXNPKQQKEHQPTPLGGMMGSLRVIEL 60
           MSGV++A    + PQ                        Q+   P+  GGMMGSLRVIEL
Sbjct: 65  MSGVSVATAPPTAPQTPG-----------------TKANQRSEAPSA-GGMMGSLRVIEL 106

Query: 61  QLVAFILVFSASGLVPLFDLIFPALASAYILALSRFX-XXXXXXXXXXXXXEVFKGSRLF 119
           QLVAFILVFSASGLVPL DL+FPALASAYILAL+R+               E+F+ S +F
Sbjct: 107 QLVAFILVFSASGLVPLLDLVFPALASAYILALARYAFPSSPSTTSNSQQQEIFQVSSMF 166

Query: 120 RMYVVVGTTVGLFLPLAYVLGGFARGDEHAVRSATPHLFLLSFQILTENIISELSLFS 177
           RMY++VGTT+GLFLPLAYVLGGFARGD+HAVRSATPHLFLLSFQILTENIIS LSLFS
Sbjct: 167 RMYIIVGTTIGLFLPLAYVLGGFARGDQHAVRSATPHLFLLSFQILTENIISSLSLFS 224


>Medtr3g096890.3 | transmembrane protein, putative | HC |
           chr3:44344457-44342562 | 20130731
          Length = 269

 Score =  197 bits (502), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 110/178 (61%), Positives = 125/178 (70%), Gaps = 19/178 (10%)

Query: 1   MSGVTLAVDRSSVPQQRDXXXXXXXXXXXXXXXXXNPKQQKEHQPTPLGGMMGSLRVIEL 60
           MSGV++A    + PQ                        Q+   P+  GGMMGSLRVIEL
Sbjct: 1   MSGVSVATAPPTAPQTPG-----------------TKANQRSEAPSA-GGMMGSLRVIEL 42

Query: 61  QLVAFILVFSASGLVPLFDLIFPALASAYILALSRFX-XXXXXXXXXXXXXEVFKGSRLF 119
           QLVAFILVFSASGLVPL DL+FPALASAYILAL+R+               E+F+ S +F
Sbjct: 43  QLVAFILVFSASGLVPLLDLVFPALASAYILALARYAFPSSPSTTSNSQQQEIFQVSSMF 102

Query: 120 RMYVVVGTTVGLFLPLAYVLGGFARGDEHAVRSATPHLFLLSFQILTENIISELSLFS 177
           RMY++VGTT+GLFLPLAYVLGGFARGD+HAVRSATPHLFLLSFQILTENIIS LSLFS
Sbjct: 103 RMYIIVGTTIGLFLPLAYVLGGFARGDQHAVRSATPHLFLLSFQILTENIISSLSLFS 160


>Medtr8g094540.1 | transmembrane protein, putative | HC |
           chr8:39475315-39474161 | 20130731
          Length = 262

 Score =  163 bits (412), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 89/140 (63%), Positives = 106/140 (75%), Gaps = 6/140 (4%)

Query: 38  KQQKEHQPTPLGGMMGSLRVIELQLVAFILVFSASGLVPLFDLIFPALASAYILALSRFX 97
           ++++EH       MMGSLRVIELQLVAF+LVFSASGLVPL DL+FP   S Y++ALSRF 
Sbjct: 16  EKKQEHGSMT---MMGSLRVIELQLVAFVLVFSASGLVPLLDLLFPFFVSIYLVALSRFA 72

Query: 98  XXXXXXXXXXXXXEVFKGSRLFRMYVVVGTTVGLFLPLAYVLGGFARGDEHAVRSATPHL 157
                         VF GS+ F+ YV+VGT +GLFLPLAYVLGGF RGD+ AV+SA+PHL
Sbjct: 73  FPSYNRGVSQ---TVFHGSKAFQFYVIVGTILGLFLPLAYVLGGFGRGDKLAVKSASPHL 129

Query: 158 FLLSFQILTENIISELSLFS 177
           FL+SFQILTENIIS LS+FS
Sbjct: 130 FLISFQILTENIISGLSVFS 149


>Medtr3g096890.2 | transmembrane protein, putative | HC |
           chr3:44344587-44342621 | 20130731
          Length = 262

 Score = 90.9 bits (224), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 53/96 (55%), Positives = 61/96 (63%), Gaps = 18/96 (18%)

Query: 1   MSGVTLAVDRSSVPQQRDXXXXXXXXXXXXXXXXXNPKQQKEHQPTPLGGMMGSLRVIEL 60
           MSGV++A    + PQ                        Q+   P+  GGMMGSLRVIEL
Sbjct: 43  MSGVSVATAPPTAPQTPGTKA-----------------NQRSEAPS-AGGMMGSLRVIEL 84

Query: 61  QLVAFILVFSASGLVPLFDLIFPALASAYILALSRF 96
           QLVAFILVFSASGLVPL DL+FPALASAYILAL+R+
Sbjct: 85  QLVAFILVFSASGLVPLLDLVFPALASAYILALARY 120


>Medtr1g100800.1 | plant/K24M7-17 protein | HC |
           chr1:45250592-45249391 | 20130731
          Length = 246

 Score = 62.8 bits (151), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 34/113 (30%), Positives = 62/113 (54%), Gaps = 6/113 (5%)

Query: 59  ELQLVAFILVFSASGLVPLFDLIFPALASAYILALSR--FXXXXXXXXXXXXXXEVFKGS 116
           +L  +A ++V SASG+V   D  F   +  Y+  +S+  F              ++    
Sbjct: 49  QLNCLAVVVVLSASGMVSPEDFGFVLFSVIYMCFISKVAFPSHPSKEQPPIFTQQI---- 104

Query: 117 RLFRMYVVVGTTVGLFLPLAYVLGGFARGDEHAVRSATPHLFLLSFQILTENI 169
           ++ ++YV +G  +GL+ P+AY+L G   GD+  +++ATPH+FLL+ Q+  E +
Sbjct: 105 KILKIYVFIGAIIGLYAPIAYILHGIFEGDKEGIKAATPHVFLLASQVFMEGV 157