Miyakogusa Predicted Gene

Lj1g3v1362050.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1362050.1 Non Characterized Hit- tr|A5BC59|A5BC59_VITVI
Putative uncharacterized protein OS=Vitis vinifera GN=,72.58,3e-18,
,CUFF.27165.1
         (81 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g096890.3 | transmembrane protein, putative | HC | chr3:44...   131   1e-31
Medtr3g096890.2 | transmembrane protein, putative | HC | chr3:44...   130   2e-31
Medtr3g096890.1 | transmembrane protein, putative | HC | chr3:44...   130   2e-31
Medtr8g094540.1 | transmembrane protein, putative | HC | chr8:39...   106   5e-24
Medtr1g100800.1 | plant/K24M7-17 protein | HC | chr1:45250592-45...    47   3e-06

>Medtr3g096890.3 | transmembrane protein, putative | HC |
           chr3:44344457-44342562 | 20130731
          Length = 269

 Score =  131 bits (330), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 61/71 (85%), Positives = 65/71 (91%)

Query: 11  QDMAWHWFGKGLAVVNLAYFSINLFGFLIPRFLPRAFERYFQERGEIYAKTAEDKRFVSS 70
           QD AW+WFGKGLAV NLAYFSINL  FLIPRFLPRAFERYFQERGEIYAK+AEDKR VS 
Sbjct: 199 QDTAWYWFGKGLAVANLAYFSINLCVFLIPRFLPRAFERYFQERGEIYAKSAEDKRSVSL 258

Query: 71  NKPQVSEKKID 81
           NKPQ+SEKK+D
Sbjct: 259 NKPQLSEKKMD 269


>Medtr3g096890.2 | transmembrane protein, putative | HC |
           chr3:44344587-44342621 | 20130731
          Length = 262

 Score =  130 bits (328), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 61/71 (85%), Positives = 65/71 (91%)

Query: 11  QDMAWHWFGKGLAVVNLAYFSINLFGFLIPRFLPRAFERYFQERGEIYAKTAEDKRFVSS 70
           QD AW+WFGKGLAV NLAYFSINL  FLIPRFLPRAFERYFQERGEIYAK+AEDKR VS 
Sbjct: 192 QDTAWYWFGKGLAVANLAYFSINLCVFLIPRFLPRAFERYFQERGEIYAKSAEDKRSVSL 251

Query: 71  NKPQVSEKKID 81
           NKPQ+SEKK+D
Sbjct: 252 NKPQLSEKKMD 262


>Medtr3g096890.1 | transmembrane protein, putative | HC |
           chr3:44344524-44342621 | 20130731
          Length = 333

 Score =  130 bits (328), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 61/71 (85%), Positives = 65/71 (91%)

Query: 11  QDMAWHWFGKGLAVVNLAYFSINLFGFLIPRFLPRAFERYFQERGEIYAKTAEDKRFVSS 70
           QD AW+WFGKGLAV NLAYFSINL  FLIPRFLPRAFERYFQERGEIYAK+AEDKR VS 
Sbjct: 263 QDTAWYWFGKGLAVANLAYFSINLCVFLIPRFLPRAFERYFQERGEIYAKSAEDKRSVSL 322

Query: 71  NKPQVSEKKID 81
           NKPQ+SEKK+D
Sbjct: 323 NKPQLSEKKMD 333


>Medtr8g094540.1 | transmembrane protein, putative | HC |
           chr8:39475315-39474161 | 20130731
          Length = 262

 Score =  106 bits (265), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 51/69 (73%), Positives = 55/69 (79%)

Query: 11  QDMAWHWFGKGLAVVNLAYFSINLFGFLIPRFLPRAFERYFQERGEIYAKTAEDKRFVSS 70
           +D AW WFG+ LAV NL YFSINLFGFLIPRFLPRAF+RYFQERGEIYAK AEDK     
Sbjct: 188 KDKAWFWFGRVLAVANLVYFSINLFGFLIPRFLPRAFKRYFQERGEIYAKAAEDKPRGVI 247

Query: 71  NKPQVSEKK 79
           NK  V +KK
Sbjct: 248 NKSHVPQKK 256


>Medtr1g100800.1 | plant/K24M7-17 protein | HC |
           chr1:45250592-45249391 | 20130731
          Length = 246

 Score = 47.4 bits (111), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 19/38 (50%), Positives = 28/38 (73%)

Query: 17  WFGKGLAVVNLAYFSINLFGFLIPRFLPRAFERYFQER 54
           + G+ LAV N+A++  NLFGFLIP +LPR F+ Y+  +
Sbjct: 206 YAGRALAVANMAFWCFNLFGFLIPVYLPRVFKAYYSSQ 243