Miyakogusa Predicted Gene

Lj1g3v1355760.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1355760.1 Non Characterized Hit- tr|B9RRG2|B9RRG2_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,42.71,0.0000000009,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
seg,NULL,CUFF.27265.1
         (330 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g096670.2 | F-box plant protein, putative | HC | chr3:4423...   504   e-143
Medtr3g096670.1 | F-box plant protein, putative | HC | chr3:4423...   502   e-142
Medtr8g094190.1 | F-box plant protein, putative | HC | chr8:3939...   317   1e-86
Medtr8g094150.1 | F-box plant-like protein | HC | chr8:39376619-...   261   8e-70
Medtr0095s0110.1 | F-box plant-like protein | HC | scaffold0095:...   257   1e-68

>Medtr3g096670.2 | F-box plant protein, putative | HC |
           chr3:44234632-44238356 | 20130731
          Length = 617

 Score =  504 bits (1297), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 249/331 (75%), Positives = 273/331 (82%), Gaps = 6/331 (1%)

Query: 1   MYKLGNGQIDYKASSQEAAGPKKPEMDDIRPSLDGSSAVPNSLPEEDGLTQCIKKKSLRG 60
           +YKLG+ +IDYKA+SQE  G K+ E+DD     D + AVP+SL  EDG TQ +K+K +  
Sbjct: 290 LYKLGSSEIDYKANSQEVVGSKQLELDD-----DPARAVPDSLFGEDGGTQSVKRKGIHR 344

Query: 61  YVWNSFKQILGRSNSSKGSHLVSKKLTSSSEIRHARLQEFLRPSNIIRLSLNASTVKLSS 120
           Y WNS K ILGRSNS   SH  SKKLT+SSE RHA+LQEFL+ SN  RL+LNAS VKL+S
Sbjct: 345 YFWNSLKHILGRSNSINDSHSASKKLTTSSEKRHAQLQEFLKSSNTTRLTLNASNVKLTS 404

Query: 121 YRAWPNMHDSRFALYKLPLRVARADQEFAGLWGGTFGWPPGKPSEDKPGKALFFLLLSYE 180
           YRAWPNMHDSRFALYKLPLRV  ADQE+AGLWGG FGWPPGKPSEDKPGKALFFLLLSYE
Sbjct: 405 YRAWPNMHDSRFALYKLPLRVPSADQEYAGLWGGAFGWPPGKPSEDKPGKALFFLLLSYE 464

Query: 181 EFQGQQLLIGTKILEGTHYVLHPNGSAMFIVNINDPSSEPFPWDTDADSYPVNIEHSFVG 240
           EFQGQQLLI TKILEGTHYVLHPNGSAMFI NIN+PSSEPFPW+TDADS PVNI+H + G
Sbjct: 465 EFQGQQLLIATKILEGTHYVLHPNGSAMFIANINEPSSEPFPWNTDADSLPVNIKHVYTG 524

Query: 241 EGIASGYGFRYPGSKPGSLFVFQNGVIAFTWKESRAVXXXXXXXXXXXXKKGERIPSLPP 300
           EGIASGYGFRYPGSKPGSLFVF NGVIAF WKE+RAV            KKGERIPSLPP
Sbjct: 525 EGIASGYGFRYPGSKPGSLFVFHNGVIAFIWKETRAVLTLQRLNLQELLKKGERIPSLPP 584

Query: 301 VANFSYLTKSYSNVFAGFPSSSNCY-SPRKG 330
           +ANFSYLTKSYSNVFAGFP+SSN   SPRK 
Sbjct: 585 IANFSYLTKSYSNVFAGFPTSSNSLSSPRKA 615


>Medtr3g096670.1 | F-box plant protein, putative | HC |
           chr3:44234632-44237480 | 20130731
          Length = 625

 Score =  502 bits (1293), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 248/329 (75%), Positives = 272/329 (82%), Gaps = 6/329 (1%)

Query: 1   MYKLGNGQIDYKASSQEAAGPKKPEMDDIRPSLDGSSAVPNSLPEEDGLTQCIKKKSLRG 60
           +YKLG+ +IDYKA+SQE  G K+ E+DD     D + AVP+SL  EDG TQ +K+K +  
Sbjct: 290 LYKLGSSEIDYKANSQEVVGSKQLELDD-----DPARAVPDSLFGEDGGTQSVKRKGIHR 344

Query: 61  YVWNSFKQILGRSNSSKGSHLVSKKLTSSSEIRHARLQEFLRPSNIIRLSLNASTVKLSS 120
           Y WNS K ILGRSNS   SH  SKKLT+SSE RHA+LQEFL+ SN  RL+LNAS VKL+S
Sbjct: 345 YFWNSLKHILGRSNSINDSHSASKKLTTSSEKRHAQLQEFLKSSNTTRLTLNASNVKLTS 404

Query: 121 YRAWPNMHDSRFALYKLPLRVARADQEFAGLWGGTFGWPPGKPSEDKPGKALFFLLLSYE 180
           YRAWPNMHDSRFALYKLPLRV  ADQE+AGLWGG FGWPPGKPSEDKPGKALFFLLLSYE
Sbjct: 405 YRAWPNMHDSRFALYKLPLRVPSADQEYAGLWGGAFGWPPGKPSEDKPGKALFFLLLSYE 464

Query: 181 EFQGQQLLIGTKILEGTHYVLHPNGSAMFIVNINDPSSEPFPWDTDADSYPVNIEHSFVG 240
           EFQGQQLLI TKILEGTHYVLHPNGSAMFI NIN+PSSEPFPW+TDADS PVNI+H + G
Sbjct: 465 EFQGQQLLIATKILEGTHYVLHPNGSAMFIANINEPSSEPFPWNTDADSLPVNIKHVYTG 524

Query: 241 EGIASGYGFRYPGSKPGSLFVFQNGVIAFTWKESRAVXXXXXXXXXXXXKKGERIPSLPP 300
           EGIASGYGFRYPGSKPGSLFVF NGVIAF WKE+RAV            KKGERIPSLPP
Sbjct: 525 EGIASGYGFRYPGSKPGSLFVFHNGVIAFIWKETRAVLTLQRLNLQELLKKGERIPSLPP 584

Query: 301 VANFSYLTKSYSNVFAGFPSSSNCY-SPR 328
           +ANFSYLTKSYSNVFAGFP+SSN   SPR
Sbjct: 585 IANFSYLTKSYSNVFAGFPTSSNSLSSPR 613


>Medtr8g094190.1 | F-box plant protein, putative | HC |
           chr8:39394266-39396423 | 20130731
          Length = 629

 Score =  317 bits (811), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 178/367 (48%), Positives = 216/367 (58%), Gaps = 51/367 (13%)

Query: 1   MYKLGNGQIDYKASSQEAAGPKKPEMDDIRPSLDGSSAVPNSLPEEDGLTQCIKKKSLRG 60
           MYKLG  QI+ K +SQ      + E+D++R S D S A+      +D  TQCIK+KSL G
Sbjct: 262 MYKLGCIQIENKENSQGEVCSMELEVDEVRKSHDYSKALSFPPSNKDNHTQCIKRKSLGG 321

Query: 61  YVWNSFKQILG--------------------------RSNSSKGS---------HLVSKK 85
           Y W  FK ILG                          RS+S  GS          +  K+
Sbjct: 322 YFWGGFKHILGRSSLVDGCAVNTDQQHNATTGARNHRRSSSIDGSVANIDQQRNMMAGKR 381

Query: 86  LTSSS--------EIRHARLQEFLRPSNIIRLSLN--------ASTVKLSSYRAWPNMHD 129
               S         I       + R S+ I  S+N         +  +      WPNM+ 
Sbjct: 382 DDQRSGTTDGIVVNIDQKHGTSYHRRSSTIDGSINNIDQQHKMIAGTRDDRKSGWPNMNP 441

Query: 130 SRFALYKLPLRVARADQEFAGLWGGTFGWPPGKPSEDKPGKALFFLLLSYEEFQGQQLLI 189
           + F LY++PL+V + DQ +AGLWGGT GWPP K S++KP KALFFLLLSY E +GQQLLI
Sbjct: 442 NWFRLYQMPLQVPKEDQVYAGLWGGTLGWPPEKSSQNKPEKALFFLLLSYWESKGQQLLI 501

Query: 190 GTKILEGTHYVLHPNGSAMFIVNINDPSSEPFPWDTDADSYPVNIEHSFVGEGIASGYGF 249
           GTKILEG  Y LHPNGSAMFIVNIN+PSS+PFPW+TD DS+P+NI+H+F GEGIA GYGF
Sbjct: 502 GTKILEGARYALHPNGSAMFIVNINEPSSDPFPWETDRDSFPMNIQHAFAGEGIARGYGF 561

Query: 250 RYPGSKPGSLFVFQNGVIAFTWKESRAVXXXXXXXXXXXXKKGERIPSLPPVANFSYLTK 309
           +YPG+K GSLFV QNG +AF WKESR V            KKG RIPSLPP+ NFSYL K
Sbjct: 562 KYPGAKSGSLFVLQNGDLAFVWKESRDVLTLQRLNLQELLKKGRRIPSLPPIDNFSYLMK 621

Query: 310 SYSNVFA 316
           S  NVF 
Sbjct: 622 SCLNVFT 628


>Medtr8g094150.1 | F-box plant-like protein | HC |
           chr8:39376619-39378987 | 20130731
          Length = 566

 Score =  261 bits (666), Expect = 8e-70,   Method: Compositional matrix adjust.
 Identities = 143/252 (56%), Positives = 172/252 (68%), Gaps = 20/252 (7%)

Query: 65  SFKQILGRSNSSKGSHLVSKKLTSSSEIRHARLQEFLRPSNIIRLSLNASTVKLSSYRAW 124
           S   I  + N++ G+      ++SS EI++A+LQ+FLR S+ +RL+L+A   KLSS+R W
Sbjct: 334 SVVNINQKHNTTAGTRESDIGISSSHEIKNAKLQDFLRSSDTLRLTLSALNAKLSSFRGW 393

Query: 125 PNMHDSRFALYKLPLRVARADQEFAGLWGGTFGWPPGKPSEDKPGKALFFLLLSYEEFQG 184
           PNM+ + F                    GGTFGWP  KPS++K  KALFFLLLSY E +G
Sbjct: 394 PNMNKNWF--------------------GGTFGWPHEKPSQNKLKKALFFLLLSYSESKG 433

Query: 185 QQLLIGTKILEGTHYVLHPNGSAMFIVNINDPSSEPFPWDTDADSYPVNIEHSFVGEGIA 244
           QQLLIGTK+LEGT Y L PNGSAMFIVNIN+PSSEPFPW+TD +S  +NIEH+FVGEGIA
Sbjct: 434 QQLLIGTKVLEGTRYALRPNGSAMFIVNINEPSSEPFPWNTDRESLSMNIEHTFVGEGIA 493

Query: 245 SGYGFRYPGSKPGSLFVFQNGVIAFTWKESRAVXXXXXXXXXXXXKKGERIPSLPPVANF 304
            G GF+YPG K GS FVFQNG +AF WKESR V            KKG RIPSLPP+ NF
Sbjct: 494 GGCGFKYPGLKSGSFFVFQNGDLAFVWKESRDVLTLQRLNLQELLKKGRRIPSLPPIDNF 553

Query: 305 SYLTKSYSNVFA 316
           SYL KS  NVF 
Sbjct: 554 SYLMKSCLNVFT 565



 Score = 63.2 bits (152), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 36/76 (47%), Positives = 45/76 (59%), Gaps = 1/76 (1%)

Query: 1   MYKLGNGQIDYKASSQ-EAAGPKKPEMDDIRPSLDGSSAVPNSLPEEDGLTQCIKKKSLR 59
           MYKL +  I+ K +SQ E  G    E+D +R   D S A       +D  TQCIK+KSL 
Sbjct: 177 MYKLCSIHIENKENSQGEEIGSMDLEVDQVRKHHDNSKAFAFPPINKDSHTQCIKRKSLG 236

Query: 60  GYVWNSFKQILGRSNS 75
           GY W +FK ILGRS+S
Sbjct: 237 GYFWGNFKHILGRSSS 252


>Medtr0095s0110.1 | F-box plant-like protein | HC |
           scaffold0095:39001-38456 | 20130731
          Length = 181

 Score =  257 bits (656), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 123/180 (68%), Positives = 139/180 (77%)

Query: 137 LPLRVARADQEFAGLWGGTFGWPPGKPSEDKPGKALFFLLLSYEEFQGQQLLIGTKILEG 196
           +PL+V   DQ +AGLWGG  GWPP K S++KP KALFFLL SY E +GQQLLIGTKILEG
Sbjct: 1   MPLQVPEQDQVYAGLWGGALGWPPEKSSQNKPEKALFFLLHSYWESKGQQLLIGTKILEG 60

Query: 197 THYVLHPNGSAMFIVNINDPSSEPFPWDTDADSYPVNIEHSFVGEGIASGYGFRYPGSKP 256
             Y LHPNGSAMFIVNINDPSS+PFPW+TD DS+P+NI+H+F GEGIA GYGF+YPG+K 
Sbjct: 61  ARYALHPNGSAMFIVNINDPSSDPFPWETDRDSFPMNIQHAFAGEGIARGYGFKYPGAKS 120

Query: 257 GSLFVFQNGVIAFTWKESRAVXXXXXXXXXXXXKKGERIPSLPPVANFSYLTKSYSNVFA 316
           GSLFV QNG +AF WKESR V            KKG RIPSLPP+ NFSYL KS  NVF 
Sbjct: 121 GSLFVLQNGDLAFVWKESRDVLTLQRLNLQELLKKGRRIPSLPPIDNFSYLMKSCLNVFT 180