Miyakogusa Predicted Gene

Lj1g3v1355740.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1355740.1 tr|B8PJK2|B8PJK2_POSPM Predicted protein
OS=Postia placenta (strain ATCC 44394 / Madison 698-R)
GN=P,30.43,0.00003,F-box,F-box domain, cyclin-like; SUBFAMILY NOT
NAMED,NULL; FAMILY NOT NAMED,NULL; A Receptor for Ubi,CUFF.27264.1
         (293 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g096670.2 | F-box plant protein, putative | HC | chr3:4423...   472   e-133
Medtr3g096670.1 | F-box plant protein, putative | HC | chr3:4423...   471   e-133
Medtr8g094190.1 | F-box plant protein, putative | HC | chr8:3939...   322   3e-88
Medtr8g094150.1 | F-box plant-like protein | HC | chr8:39376619-...   167   1e-41

>Medtr3g096670.2 | F-box plant protein, putative | HC |
           chr3:44234632-44238356 | 20130731
          Length = 617

 Score =  472 bits (1215), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 227/289 (78%), Positives = 252/289 (87%), Gaps = 1/289 (0%)

Query: 6   CDSSTLLFLPDDVFAIVSQFLSPRDVCNLALCCKSLNTLVASEKIWLTQCEVLGIVPHKD 65
           CDS+ LL+LPDDVFAI+S+  SPRD+CNL+LCCKSLN+LVASEKIWLTQC+VL IVPHKD
Sbjct: 2   CDSNMLLYLPDDVFAIISKSFSPRDICNLSLCCKSLNSLVASEKIWLTQCQVLCIVPHKD 61

Query: 66  LVEWRKGVLSYKALCRFLLSVQPLIGIWVHQNPELGNVVYVMPGFVSVVGCRIIPQELGP 125
           LVEWRKGV SYKALCRFLL VQPLIGIWVHQNPELGNVVYVMPGFVSVVGCR+IPQELGP
Sbjct: 62  LVEWRKGVCSYKALCRFLLKVQPLIGIWVHQNPELGNVVYVMPGFVSVVGCRVIPQELGP 121

Query: 126 LGVEDGPILWASVFEVICDFDGSTMFFLHGREKGVDYVYPGSVESIDRSCNVLLLEVEPS 185
           LG+EDGPILWASVFEVI DFDGS MFFLHGREKG+DY+YPGS   ID+ CN+LLLEVEP 
Sbjct: 122 LGMEDGPILWASVFEVIADFDGSPMFFLHGREKGIDYIYPGSARCIDKFCNILLLEVEPE 181

Query: 186 GHKKVSSLLQSKSFAHQSGVEVSAKVCRSSSDISGSKRV-GGNSEATVTFSKLAFFDRRR 244
            +K V SLLQSKSF HQSG+E+S KV RS+SDI   + V G N+E  VTFSKLAF DRR+
Sbjct: 182 QNKNVGSLLQSKSFVHQSGLELSRKVSRSNSDICRPQMVIGNNNEGNVTFSKLAFSDRRK 241

Query: 245 LLEVTTSNVRKTVPDKVTGPLFPRLRDDEENFQKDLVLLWERRSSLCQM 293
           LLEVTT  VR+ +PD V GPLFPRLRDDE NFQKDLVLL ERRS L ++
Sbjct: 242 LLEVTTGQVRQKIPDTVLGPLFPRLRDDEGNFQKDLVLLRERRSQLSRL 290


>Medtr3g096670.1 | F-box plant protein, putative | HC |
           chr3:44234632-44237480 | 20130731
          Length = 625

 Score =  471 bits (1213), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 227/289 (78%), Positives = 252/289 (87%), Gaps = 1/289 (0%)

Query: 6   CDSSTLLFLPDDVFAIVSQFLSPRDVCNLALCCKSLNTLVASEKIWLTQCEVLGIVPHKD 65
           CDS+ LL+LPDDVFAI+S+  SPRD+CNL+LCCKSLN+LVASEKIWLTQC+VL IVPHKD
Sbjct: 2   CDSNMLLYLPDDVFAIISKSFSPRDICNLSLCCKSLNSLVASEKIWLTQCQVLCIVPHKD 61

Query: 66  LVEWRKGVLSYKALCRFLLSVQPLIGIWVHQNPELGNVVYVMPGFVSVVGCRIIPQELGP 125
           LVEWRKGV SYKALCRFLL VQPLIGIWVHQNPELGNVVYVMPGFVSVVGCR+IPQELGP
Sbjct: 62  LVEWRKGVCSYKALCRFLLKVQPLIGIWVHQNPELGNVVYVMPGFVSVVGCRVIPQELGP 121

Query: 126 LGVEDGPILWASVFEVICDFDGSTMFFLHGREKGVDYVYPGSVESIDRSCNVLLLEVEPS 185
           LG+EDGPILWASVFEVI DFDGS MFFLHGREKG+DY+YPGS   ID+ CN+LLLEVEP 
Sbjct: 122 LGMEDGPILWASVFEVIADFDGSPMFFLHGREKGIDYIYPGSARCIDKFCNILLLEVEPE 181

Query: 186 GHKKVSSLLQSKSFAHQSGVEVSAKVCRSSSDISGSKRV-GGNSEATVTFSKLAFFDRRR 244
            +K V SLLQSKSF HQSG+E+S KV RS+SDI   + V G N+E  VTFSKLAF DRR+
Sbjct: 182 QNKNVGSLLQSKSFVHQSGLELSRKVSRSNSDICRPQMVIGNNNEGNVTFSKLAFSDRRK 241

Query: 245 LLEVTTSNVRKTVPDKVTGPLFPRLRDDEENFQKDLVLLWERRSSLCQM 293
           LLEVTT  VR+ +PD V GPLFPRLRDDE NFQKDLVLL ERRS L ++
Sbjct: 242 LLEVTTGQVRQKIPDTVLGPLFPRLRDDEGNFQKDLVLLRERRSQLSRL 290


>Medtr8g094190.1 | F-box plant protein, putative | HC |
           chr8:39394266-39396423 | 20130731
          Length = 629

 Score =  322 bits (825), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 167/292 (57%), Positives = 202/292 (69%), Gaps = 39/292 (13%)

Query: 3   PEPCDSSTLLFLPDDVFAIVSQFLSPRDVCNLALCCKSLNTLVASEKIWLTQCEVLGIVP 62
           P P DSS L+ LPDDVFA VS++L PR+V NL+LCCKSL  L +SEK+WLTQC+++ IV 
Sbjct: 6   PYPLDSSPLIHLPDDVFATVSRYLIPREVFNLSLCCKSLYALASSEKVWLTQCDIIDIVS 65

Query: 63  HKDLVEWRKGVLSYKALCRFLLSVQPLIGIWVHQNPELGNVVYVMPGFVSVVGCRIIPQE 122
            KDLVEWR  V SYKALCRFLLSV+ L+GIWV QNPELGN+VYVMPGFVS+V CR+IPQE
Sbjct: 66  LKDLVEWRVCVSSYKALCRFLLSVKSLLGIWVQQNPELGNLVYVMPGFVSIVACRVIPQE 125

Query: 123 LGPLGVEDGPILWASVFEVICDFDGSTMFFLHGR-EKGVDYVYPGSVESIDRSCNVLLLE 181
           +  LG++D  ILW+ VFE++CDFDGS MFFLHGR E+G+D VY GS++ ++R CN+LLLE
Sbjct: 126 VVSLGIKDCSILWSPVFEIVCDFDGSNMFFLHGREEEGIDCVYHGSLKCVNRFCNLLLLE 185

Query: 182 VEPSGHKKVSSLLQSKSFAHQSGVEVSAKVCRSSSDISGSKRVGGNSEATVTFSKLAFFD 241
           VE                                       R   N+E  + F KL F D
Sbjct: 186 VE--------------------------------------SRKQDNNEVMIPFRKLGFRD 207

Query: 242 RRRLLEVTTSNVRKTVPDKVTGPLFPRLRDDEENFQKDLVLLWERRSSLCQM 293
           R++LLE+TTS VR  VP+  TG LFPR RDD  NFQKDLVLL ERR+ L QM
Sbjct: 208 RKKLLEITTSQVRIEVPNMGTGRLFPRSRDDSVNFQKDLVLLKERRAFLVQM 259


>Medtr8g094150.1 | F-box plant-like protein | HC |
           chr8:39376619-39378987 | 20130731
          Length = 566

 Score =  167 bits (422), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 104/239 (43%), Positives = 130/239 (54%), Gaps = 71/239 (29%)

Query: 56  EVLGIVPHKDLVEWRKGVLSYKALCRFLLSVQPLIGIWVHQNPELGNVVYVMPGFVSVVG 115
           ++  IV  K+L EWRK V SYK+LCRFLLSV+PL+GIWV QNPELGN+VYVMPGFVSVV 
Sbjct: 6   QIKRIVSLKELAEWRKYVSSYKSLCRFLLSVKPLLGIWVQQNPELGNLVYVMPGFVSVVA 65

Query: 116 CRIIPQELGPLGVEDGPILWASVFEVI-CDFDGSTMFFLHGREKGVDYVYPGSVESIDRS 174
           CRIIPQE+  LG+++  ILW+ VFE++ C                   VY GS++ ++R 
Sbjct: 66  CRIIPQEVVSLGIQNCSILWSPVFEIVYC-------------------VYHGSLKCVNRF 106

Query: 175 CNVLLLEVEPSGHKKVSSLLQSKSFAHQSGVEVSAKVCRSSSDISGSKRVGGNSEATVTF 234
           CN+LLL VE                                           +SEA V F
Sbjct: 107 CNLLLLGVESRKQ---------------------------------------DSEAIVPF 127

Query: 235 SKLAFFDRRRLLEVTTSNVRKTVPDKVTGPLFPRLRDDEENFQKDLVLLWERRSSLCQM 293
           SKL F DR++LLE+T S  +             RLR    NFQKDLV+L ERR  L +M
Sbjct: 128 SKLGFRDRKKLLELTASTNQ------------VRLRFLNPNFQKDLVMLKERRGFLSRM 174