Miyakogusa Predicted Gene

Lj1g3v1318310.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1318310.1 Non Characterized Hit- tr|I3SY87|I3SY87_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,95.24,0.0000000000001,
,NODE_69252_length_131_cov_115.801529.path1.1
         (42 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g093800.1 | histone deacetylase superfamily protein | HC |...    79   7e-16

>Medtr8g093800.1 | histone deacetylase superfamily protein | HC |
           chr8:39251957-39246652 | 20130731
          Length = 420

 Score = 79.3 bits (194), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 38/42 (90%), Positives = 42/42 (100%)

Query: 1   MDQAMEKGLILIEGSGPTYATSTTFQESIVAAGAGLALVDSV 42
           MDQA+EKGLI+++GSGPTYATSTTFQESIVAAGAGLALVDSV
Sbjct: 135 MDQALEKGLIVVDGSGPTYATSTTFQESIVAAGAGLALVDSV 176