Miyakogusa Predicted Gene

Lj1g3v1316960.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1316960.1 Non Characterized Hit- tr|K4C4A3|K4C4A3_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,56.41,7e-16,PEN-2,Gamma-secretase aspartyl protease complex,
presenilin enhancer-2 subunit; GAMMA-SECRETASE SUBU,CUFF.27111.1
         (136 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g096320.1 | GDP-mannose transporter, putative | HC | chr3:...   191   2e-49

>Medtr3g096320.1 | GDP-mannose transporter, putative | HC |
           chr3:44019323-44021064 | 20130731
          Length = 133

 Score =  191 bits (485), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 90/116 (77%), Positives = 97/116 (83%)

Query: 21  FASSLPLWPTIDGQLGLSEEESEKHARRFYNFGFXXXXXXXXXNCFYFWPVLRHAHSFPR 80
            A S+P+WPTIDG LGLSEEES K+ARRFY FGF         NCFYFWPV+RH+HSFPR
Sbjct: 18  LALSVPVWPTIDGPLGLSEEESVKYARRFYKFGFALLPLLWAVNCFYFWPVIRHSHSFPR 77

Query: 81  IRPYIVGSAVGFAVFTALLCSWALTFSIGGERLFGPVWDQLVMYNLADRLGLTSWN 136
           IRPY+VGSAVGF VF  LLCSWALTFSIGGERLFGPVWDQLVMYNLADR GLT W+
Sbjct: 78  IRPYVVGSAVGFTVFATLLCSWALTFSIGGERLFGPVWDQLVMYNLADRFGLTGWS 133