Miyakogusa Predicted Gene
- Lj1g3v1300590.3
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v1300590.3 Non Characterized Hit- tr|F6H4A0|F6H4A0_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,41.25,0.000000000000005,seg,NULL,CUFF.27087.3
(171 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr3g094740.1 | ABC transporter-like protein | HC | chr3:43240... 88 5e-18
Medtr3g094740.3 | ABC transporter-like protein | HC | chr3:43240... 88 5e-18
Medtr8g091710.1 | ABC transporter-like protein | HC | chr8:38275... 87 6e-18
Medtr3g094740.2 | ABC transporter-like protein | HC | chr3:43240... 87 6e-18
>Medtr3g094740.1 | ABC transporter-like protein | HC |
chr3:43240478-43224256 | 20130731
Length = 744
Score = 87.8 bits (216), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/151 (43%), Positives = 77/151 (50%), Gaps = 13/151 (8%)
Query: 2 ASSSLLLRPELKFLPPQITPKRRCFSLSGFCLCSVSRHNVSLR-MRIRPVKEEGAAVVDL 60
+SSLL +L FL PQIT + R FS S + S NV+LR RIR KEE A +
Sbjct: 3 TTSSLLQLSQLHFLSPQITLRNR-FSFSTRSISRFSTSNVTLRSTRIRASKEESA----I 57
Query: 61 AERASDVKWXXXXXXXXXXXXXXXXXFVRGYDLNGSLVKYXXXXXXXXXXXXXXXXEAS- 119
AER +DV+W +V G +NGS VKY EAS
Sbjct: 58 AERVNDVEWSGNGVASRAGSNGAAGGYVNGA-VNGSSVKYGNGNGVASTVVVDV--EASK 114
Query: 120 ---SKRKRRLEEIGKEDAWFKQRGEPQVEVA 147
RKRRLEEIGKEDAWFKQ E +VEVA
Sbjct: 115 VNEDGRKRRLEEIGKEDAWFKQTEEQKVEVA 145
>Medtr3g094740.3 | ABC transporter-like protein | HC |
chr3:43240478-43224287 | 20130731
Length = 744
Score = 87.8 bits (216), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/151 (43%), Positives = 77/151 (50%), Gaps = 13/151 (8%)
Query: 2 ASSSLLLRPELKFLPPQITPKRRCFSLSGFCLCSVSRHNVSLR-MRIRPVKEEGAAVVDL 60
+SSLL +L FL PQIT + R FS S + S NV+LR RIR KEE A +
Sbjct: 3 TTSSLLQLSQLHFLSPQITLRNR-FSFSTRSISRFSTSNVTLRSTRIRASKEESA----I 57
Query: 61 AERASDVKWXXXXXXXXXXXXXXXXXFVRGYDLNGSLVKYXXXXXXXXXXXXXXXXEAS- 119
AER +DV+W +V G +NGS VKY EAS
Sbjct: 58 AERVNDVEWSGNGVASRAGSNGAAGGYVNGA-VNGSSVKYGNGNGVASTVVVDV--EASK 114
Query: 120 ---SKRKRRLEEIGKEDAWFKQRGEPQVEVA 147
RKRRLEEIGKEDAWFKQ E +VEVA
Sbjct: 115 VNEDGRKRRLEEIGKEDAWFKQTEEQKVEVA 145
>Medtr8g091710.1 | ABC transporter-like protein | HC |
chr8:38275436-38265201 | 20130731
Length = 735
Score = 87.4 bits (215), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 74/154 (48%), Positives = 79/154 (51%), Gaps = 25/154 (16%)
Query: 1 MASSSLLLRPELKFLPPQITPKRRCFSLSGFCLCSVSRHNVSLRMRIRPVKEEGAAVVDL 60
MASSS LL EL FL PQ TPKRR S S FC+ L +IR +KEEGA V
Sbjct: 1 MASSSSLLLTELNFLAPQFTPKRRR-SNSRFCI---------LPTQIRALKEEGALV--- 47
Query: 61 AER-ASDVKWXXXXXXXXXXXXXXXXXFVRGY---DLNGSLVKYXXXXXXXXXXXXXXXX 116
ER SDVKW VRGY NGSLVKY
Sbjct: 48 EERIVSDVKWSGNGTVVNGSNGS-----VRGYVNGGGNGSLVKYVNGNGVAVEVVEDFVE 102
Query: 117 EASSK---RKRRLEEIGKEDAWFKQRGEPQVEVA 147
+ K RK+RLEEIGKEDAWFKQ GEPQVEVA
Sbjct: 103 TSKRKEVGRKKRLEEIGKEDAWFKQNGEPQVEVA 136
>Medtr3g094740.2 | ABC transporter-like protein | HC |
chr3:43240323-43224504 | 20130731
Length = 725
Score = 87.4 bits (215), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 66/151 (43%), Positives = 77/151 (50%), Gaps = 13/151 (8%)
Query: 2 ASSSLLLRPELKFLPPQITPKRRCFSLSGFCLCSVSRHNVSLR-MRIRPVKEEGAAVVDL 60
+SSLL +L FL PQIT + R FS S + S NV+LR RIR KEE A +
Sbjct: 3 TTSSLLQLSQLHFLSPQITLRNR-FSFSTRSISRFSTSNVTLRSTRIRASKEESA----I 57
Query: 61 AERASDVKWXXXXXXXXXXXXXXXXXFVRGYDLNGSLVKYXXXXXXXXXXXXXXXXEAS- 119
AER +DV+W +V G +NGS VKY EAS
Sbjct: 58 AERVNDVEWSGNGVASRAGSNGAAGGYVNGA-VNGSSVKYGNGNGVASTVVVDV--EASK 114
Query: 120 ---SKRKRRLEEIGKEDAWFKQRGEPQVEVA 147
RKRRLEEIGKEDAWFKQ E +VEVA
Sbjct: 115 VNEDGRKRRLEEIGKEDAWFKQTEEQKVEVA 145