Miyakogusa Predicted Gene

Lj1g3v1289240.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1289240.1 tr|B7G894|B7G894_PHATC Predicted protein
OS=Phaeodactylum tricornutum (strain CCAP 1055/1)
GN=PHATRD,31.53,0.000000000000001,OXIDATION RESISTANCE PROTEIN 1,NULL;
NUCLEOLAR PROTEIN 7/ESTROGEN RECEPTOR
COACTIVATOR-RELATED,NULL;,CUFF.27077.1
         (519 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g095660.1 | TLD-domain nucleolar protein | HC | chr3:43699...   766   0.0  
Medtr7g098720.1 | TLD-domain nucleolar protein | HC | chr7:39525...   163   5e-40
Medtr7g105640.2 | TLD-domain nucleolar protein | HC | chr7:42847...    52   2e-06
Medtr7g105640.1 | TLD-domain nucleolar protein | HC | chr7:42847...    51   3e-06

>Medtr3g095660.1 | TLD-domain nucleolar protein | HC |
           chr3:43699540-43696275 | 20130731
          Length = 531

 Score =  766 bits (1978), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 362/507 (71%), Positives = 429/507 (84%), Gaps = 7/507 (1%)

Query: 1   MGASNSAEPKLSPEQREAESIAASTGALPMLQKAFSKLANPESNTVPLQNLQQCFGLNRE 60
           MGAS S+E  +S EQ+EAE++AASTGALP+LQKAFSK A+ E++ +P++ LQ+CF   RE
Sbjct: 1   MGASTSSE-TVSAEQKEAENVAASTGALPILQKAFSKFADSETHAIPIEKLQKCFNFARE 59

Query: 61  GGSYNTENAPDSFPVLLDQLGSSLVDQFFVPDKEGISWIEFVKGYNNCCARVSASVSLNM 120
           G +Y+TEN  DS P+LLD LGSSLVDQFF+ D  GI+W+EFVKGYN CC+RVSAS+ LN 
Sbjct: 60  GRNYHTENTTDSLPLLLDHLGSSLVDQFFISDDNGINWVEFVKGYNKCCSRVSASIFLNK 119

Query: 121 VLRLFLALAGKANQPLHLEFESGDSDCKINGYLLPREVFLLLSMCWVMSWGCRGLKGKGD 180
            +R+F+ +  KAN  +HLEFES D DCK++GYLLP+ VFLLLS+CW MSW CR LKGKG+
Sbjct: 120 FIRVFVDVTKKANLDVHLEFESDDVDCKVSGYLLPKHVFLLLSICWAMSWDCRNLKGKGN 179

Query: 181 VSLPDLNHLVLSAIVSCGQVEGGFNVWDCDILSLEVQLPAGKFVTWVMSTVPCLPDCLRQ 240
           +S+PDL+HLV SA+    + EGGF+V DCD+LSLEVQ+P GKFVTWVMSTVPCLPDCL++
Sbjct: 180 LSVPDLSHLVTSAVDD--KDEGGFDVLDCDVLSLEVQIPVGKFVTWVMSTVPCLPDCLKR 237

Query: 241 YFLARLLSAVTTGDELGLSSSSAVGDISSTATHDYILTQGRAWAISITQRTTVNEEISRA 300
           YF ARL  AVT GDEL  S SS+VG+ISST   D ILT GRAWAISITQR TVNEEISRA
Sbjct: 238 YFHARLQIAVTEGDELASSDSSSVGEISSTTVCD-ILTPGRAWAISITQRNTVNEEISRA 296

Query: 301 FISGGDGIDDNLLYRASAHGRGINRFWSNVEGYKGPLLILVTASSGDADESHESSSTNRK 360
           FI  G G++DNL+YR+S HGRG+NRFWS+VEGY GPLLILV ASS +    HE +S  RK
Sbjct: 297 FIGSGAGLNDNLIYRSSTHGRGLNRFWSHVEGYHGPLLILVAASSRNG---HEGNSAIRK 353

Query: 361 WVLGALTDQGLENKDIFYGNSGCLYSISPVFHAFPPSGKEKNFVYSHLHPTGKGYQPHPK 420
           +V+GALT++GLENKDIFYG SGCLYS+SPVFH FPP+GKEKNFVYSHLHPTG+ YQ HP 
Sbjct: 354 FVIGALTNEGLENKDIFYGTSGCLYSLSPVFHLFPPTGKEKNFVYSHLHPTGRAYQSHPT 413

Query: 421 PAGVAFGGTPGNERIFMDDDFSKLTVRHHAVDKTYQSGSLIPDQGFLPVEALISEVEVWG 480
           P GVAFGGTPGNERIF+D+DFSK+T+RHHAVDKTYQSGSL+PDQGFLP EA ISEVEVWG
Sbjct: 414 PVGVAFGGTPGNERIFIDEDFSKVTIRHHAVDKTYQSGSLLPDQGFLPTEAHISEVEVWG 473

Query: 481 LGGNAAKDVQNSYKRREELFTEQRRKV 507
           LGG AAK+VQNSYK+REELFT+QRRK+
Sbjct: 474 LGGKAAKEVQNSYKKREELFTDQRRKI 500


>Medtr7g098720.1 | TLD-domain nucleolar protein | HC |
           chr7:39525688-39527169 | 20130731
          Length = 128

 Score =  163 bits (412), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 75/126 (59%), Positives = 99/126 (78%), Gaps = 1/126 (0%)

Query: 1   MGASNSAEPKLSPEQREAESIAASTGALPMLQKAFSKLANPESNTVPLQNLQQCFGLNRE 60
           MGA  S+E   + +Q+  E++AASTGALP+LQKAFSK A+ E++ +P++NLQ+ F   RE
Sbjct: 1   MGALTSSETVFAKQQK-VENMAASTGALPLLQKAFSKFADSETHAIPIENLQKYFSFARE 59

Query: 61  GGSYNTENAPDSFPVLLDQLGSSLVDQFFVPDKEGISWIEFVKGYNNCCARVSASVSLNM 120
           G +Y+T NA  SFPVLLD LGSSLVDQFF+ D  GI+W+EFVKGYN CC+RVSAS+ LN 
Sbjct: 60  GRNYHTYNATYSFPVLLDHLGSSLVDQFFISDANGINWVEFVKGYNKCCSRVSASIFLNK 119

Query: 121 VLRLFL 126
            +R+F+
Sbjct: 120 FIRVFV 125


>Medtr7g105640.2 | TLD-domain nucleolar protein | HC |
           chr7:42847488-42843003 | 20130731
          Length = 357

 Score = 51.6 bits (122), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/201 (21%), Positives = 80/201 (39%), Gaps = 29/201 (14%)

Query: 312 LLYRASAHGRGINRFWSNVEGYKGPLLILVTASSGDADESHESSSTNRKWVLGALTDQGL 371
           LLY +S +G   N F  N+  ++GP ++++    G              ++ G    Q  
Sbjct: 177 LLYHSSVNGLSFNTFLGNISNHEGPTVLILKDKDG--------------YIYGGYASQQW 222

Query: 372 ENKDIFYGNSGC-LYSISPVFHAFPPSGKEKNFVYSHLHPTGKGYQPHPKPAGVAFGGTP 430
           E    FYG+  C ++ ++P    F P+G   N  +  ++     +     P G+ FGG  
Sbjct: 223 ERHAEFYGDMKCYIFQLNPKASIFRPTGANTNLQWCAVN-----FSSEEIPNGIGFGGRE 277

Query: 431 GNERIFMDDDFSKLTVRHHAVDKTYQSGSLIPDQGFLPVEALISEVEVWGLGGNAAKDVQ 490
            +  +F+  +F +    H     T+ S  L      +P       +E WG+     +   
Sbjct: 278 NHFGLFISANFDQ---GHTFSCSTFGSPCLSKTNRIVP-----EVIECWGVTQGVVQGKN 329

Query: 491 NSYKRRE-ELFTEQRRKVSYI 510
           ++ K    E F E R  ++ +
Sbjct: 330 DAVKGTVLERFKEDRHMLNMV 350


>Medtr7g105640.1 | TLD-domain nucleolar protein | HC |
           chr7:42847555-42843000 | 20130731
          Length = 421

 Score = 50.8 bits (120), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 43/201 (21%), Positives = 80/201 (39%), Gaps = 29/201 (14%)

Query: 312 LLYRASAHGRGINRFWSNVEGYKGPLLILVTASSGDADESHESSSTNRKWVLGALTDQGL 371
           LLY +S +G   N F  N+  ++GP ++++    G              ++ G    Q  
Sbjct: 241 LLYHSSVNGLSFNTFLGNISNHEGPTVLILKDKDG--------------YIYGGYASQQW 286

Query: 372 ENKDIFYGNSGC-LYSISPVFHAFPPSGKEKNFVYSHLHPTGKGYQPHPKPAGVAFGGTP 430
           E    FYG+  C ++ ++P    F P+G   N  +  ++     +     P G+ FGG  
Sbjct: 287 ERHAEFYGDMKCYIFQLNPKASIFRPTGANTNLQWCAVN-----FSSEEIPNGIGFGGRE 341

Query: 431 GNERIFMDDDFSKLTVRHHAVDKTYQSGSLIPDQGFLPVEALISEVEVWGLGGNAAKDVQ 490
            +  +F+  +F +    H     T+ S  L      +P       +E WG+     +   
Sbjct: 342 NHFGLFISANFDQ---GHTFSCSTFGSPCLSKTNRIVP-----EVIECWGVTQGVVQGKN 393

Query: 491 NSYKRRE-ELFTEQRRKVSYI 510
           ++ K    E F E R  ++ +
Sbjct: 394 DAVKGTVLERFKEDRHMLNMV 414