Miyakogusa Predicted Gene

Lj1g3v1265870.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1265870.1 Non Characterized Hit- tr|J3MKR0|J3MKR0_ORYBR
Uncharacterized protein OS=Oryza brachyantha
GN=OB07G1,39.31,2e-18,DnaJ molecular chaperone homology domain,Heat
shock protein DnaJ, N-terminal; seg,NULL; SUBFAMILY NO,CUFF.27050.1
         (277 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g095470.1 | chaperone DnaJ domain protein | HC | chr3:4362...   331   5e-91
Medtr0015s0110.3 | DnaJ heat shock amine-terminal domain protein...   100   1e-21
Medtr0015s0110.2 | DnaJ heat shock amine-terminal domain protein...    76   4e-14
Medtr0015s0110.1 | DnaJ heat shock amine-terminal domain protein...    76   4e-14
Medtr1g017260.1 | heat shock protein-binding protein | HC | chr1...    49   5e-06

>Medtr3g095470.1 | chaperone DnaJ domain protein | HC |
           chr3:43625077-43628969 | 20130731
          Length = 273

 Score =  331 bits (848), Expect = 5e-91,   Method: Compositional matrix adjust.
 Identities = 189/285 (66%), Positives = 212/285 (74%), Gaps = 20/285 (7%)

Query: 1   MQVSRWRSLLSMKTYMIPSTTQFSAAFHSTPCSCQKWNSKSNP-GVKGDQQPSKNQIKFI 59
           MQ++RWR++LSMK ++IP  + FSA FHSTPCSC KWNS  NP   KG QQPSK+ I+F+
Sbjct: 1   MQIARWRNILSMKNHIIPPVSHFSA-FHSTPCSCHKWNS--NPDSRKGQQQPSKDHIRFV 57

Query: 60  TRQKRADTKKALKHLLYSNGASKFSFEDIETKQKFEGNSNWRGNQDGRPNSNSNKGQPXX 119
           TRQKRAD KKALKHLLYS G+S+FSFED +T  K +GNS      D R +S SNKGQP  
Sbjct: 58  TRQKRADAKKALKHLLYSGGSSRFSFEDKKTNWKLDGNS------DARSSSYSNKGQPKS 111

Query: 120 XXXXXXXXXXXXXXXXXIRREFCFFEEFDGNPEQIFHGTFGNRCFT--FRNLNGSS-EHS 176
                            IRR+  F EE DG PEQ+FH TFGNR +T  F N NGSS EHS
Sbjct: 112 GQRFGGKPQKKNKRK--IRRQ-SFCEEGDGQPEQVFHATFGNRSYTWSFCNTNGSSSEHS 168

Query: 177 ASGFEWKEHSNRTN--KWRTASDDESDNEDH--GSCCVGSSSDRTILGLPSTGPLKIEDV 232
             GFEW+EH+N+TN  KW++ASDDE D  D   GSC VGSSSDRTILGLP TGPLKIEDV
Sbjct: 169 KYGFEWREHTNKTNRNKWKSASDDEDDGNDKDDGSCRVGSSSDRTILGLPPTGPLKIEDV 228

Query: 233 KNAFRLSALKWHPDKHQGSSQAMAEEKFKLCVNAYKTLCNALSPA 277
           K AFRLSALKWHPDKHQG SQAMAEEKFKLCVNAYKTLCNALSPA
Sbjct: 229 KIAFRLSALKWHPDKHQGPSQAMAEEKFKLCVNAYKTLCNALSPA 273


>Medtr0015s0110.3 | DnaJ heat shock amine-terminal domain protein |
           HC | scaffold0015:49321-43796 | 20130731
          Length = 227

 Score =  100 bits (250), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 64/149 (42%), Positives = 86/149 (57%), Gaps = 22/149 (14%)

Query: 140 EFCFFEEFDGNPEQIFHGTFG-NRCFTFRNLNGSSEHSASGFEWKEHSNRTN-----KWR 193
           EFC   E D + E IF  TFG +R F +  +N  + H      W    N +N     KW+
Sbjct: 86  EFC---EDDIDVEDIFRSTFGGSRVFYWSFINEENPH------WGRSGNFSNYGKSWKWK 136

Query: 194 TASDDESDNEDHGSC-----CV--GSSSDRTILGLPSTGPLKIEDVKNAFRLSALKWHPD 246
             S++  D+           C+   S SDR  LGL ++GPLK+EDVK A+R  ALKWHPD
Sbjct: 137 HQSNNRYDSSTESESESESECLRSNSVSDRLALGLSASGPLKLEDVKIAYRACALKWHPD 196

Query: 247 KHQGSSQAMAEEKFKLCVNAYKTLCNALS 275
           +HQGSS+ +AEEKFK C  AY++LC+ L+
Sbjct: 197 RHQGSSKGIAEEKFKHCSAAYQSLCDKLA 225


>Medtr0015s0110.2 | DnaJ heat shock amine-terminal domain protein |
           HC | scaffold0015:49325-44177 | 20130731
          Length = 212

 Score = 75.9 bits (185), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 52/129 (40%), Positives = 70/129 (54%), Gaps = 22/129 (17%)

Query: 140 EFCFFEEFDGNPEQIFHGTFG-NRCFTFRNLNGSSEHSASGFEWKEHSNRTN-----KWR 193
           EFC   E D + E IF  TFG +R F +  +N  + H      W    N +N     KW+
Sbjct: 86  EFC---EDDIDVEDIFRSTFGGSRVFYWSFINEENPH------WGRSGNFSNYGKSWKWK 136

Query: 194 TASDDESDNEDHGSC-----CV--GSSSDRTILGLPSTGPLKIEDVKNAFRLSALKWHPD 246
             S++  D+           C+   S SDR  LGL ++GPLK+EDVK A+R  ALKWHPD
Sbjct: 137 HQSNNRYDSSTESESESESECLRSNSVSDRLALGLSASGPLKLEDVKIAYRACALKWHPD 196

Query: 247 KHQGSSQAM 255
           +HQGSS+ +
Sbjct: 197 RHQGSSKVL 205


>Medtr0015s0110.1 | DnaJ heat shock amine-terminal domain protein |
           HC | scaffold0015:45190-44177 | 20130731
          Length = 176

 Score = 75.9 bits (185), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 52/129 (40%), Positives = 70/129 (54%), Gaps = 22/129 (17%)

Query: 140 EFCFFEEFDGNPEQIFHGTFG-NRCFTFRNLNGSSEHSASGFEWKEHSNRTN-----KWR 193
           EFC   E D + E IF  TFG +R F +  +N  + H      W    N +N     KW+
Sbjct: 50  EFC---EDDIDVEDIFRSTFGGSRVFYWSFINEENPH------WGRSGNFSNYGKSWKWK 100

Query: 194 TASDDESDNEDHGSC-----CV--GSSSDRTILGLPSTGPLKIEDVKNAFRLSALKWHPD 246
             S++  D+           C+   S SDR  LGL ++GPLK+EDVK A+R  ALKWHPD
Sbjct: 101 HQSNNRYDSSTESESESESECLRSNSVSDRLALGLSASGPLKLEDVKIAYRACALKWHPD 160

Query: 247 KHQGSSQAM 255
           +HQGSS+ +
Sbjct: 161 RHQGSSKVL 169


>Medtr1g017260.1 | heat shock protein-binding protein | HC |
           chr1:4756902-4760907 | 20130731
          Length = 214

 Score = 48.9 bits (115), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 27/83 (32%), Positives = 47/83 (56%), Gaps = 6/83 (7%)

Query: 190 NKWRTASDDESDNEDHGSCCVGSSSDRTILGL--PSTGPLKIEDVKNAFRLSALKWHPDK 247
           ++W+   D   +N   GS     +   T+LGL    T P    ++K AFR  A+++HPD+
Sbjct: 127 DQWKNYQDTPREN---GSINYSLTHHYTVLGLDRSRTTPYTDAEIKTAFRTKAMQYHPDQ 183

Query: 248 HQGSSQAMAEEKFKLCVNAYKTL 270
           +Q + +A AE KFK  +++Y+ +
Sbjct: 184 NQENKEA-AEAKFKEVMDSYEAI 205