Miyakogusa Predicted Gene

Lj1g3v1244800.3
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1244800.3 tr|E9C573|E9C573_CAPO3 Gnl3l protein
OS=Capsaspora owczarzaki (strain ATCC 30864) GN=CAOG_03141
PE=4,39.34,2e-19,GTP-BINDING PROTEIN-PLANT,NULL; GTP-BINDING
PROTEIN-RELATED,NULL; coiled-coil,NULL; GN3L_Grn1,Guanin,CUFF.27075.3
         (165 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g048030.1 | guanine nucleotide-binding-like protein | HC |...   103   7e-23
Medtr7g056733.1 | GNL3L/Grn1 GTPase, putative | HC | chr7:203688...    67   7e-12

>Medtr1g048030.1 | guanine nucleotide-binding-like protein | HC |
           chr1:18178595-18172713 | 20130731
          Length = 599

 Score =  103 bits (257), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 62/129 (48%), Positives = 71/129 (55%), Gaps = 5/129 (3%)

Query: 39  LTLNGKKKVEKDPGIPNDWPFKEQELKALEXXXXXXIDELEQXXXXXXXXXXXXXLGL-- 96
           L L+GKKKVEKDPGIPNDWPFKEQELK LE      + EL +              GL  
Sbjct: 39  LQLSGKKKVEKDPGIPNDWPFKEQELKLLEARRERALAELAKKKDERKERARKRKAGLPV 98

Query: 97  --QEXXXXXXXXXXXXXXFATVGKT-RDTSDRAFYKDLVKVIEASDVLLEVLDARDPLCS 153
                               TV KT +D+SDRAF  DL  VI  SDV+LEVLDARDPL +
Sbjct: 99  DDDNSNSVETASIENTESVPTVAKTNKDSSDRAFAGDLEAVIATSDVILEVLDARDPLGT 158

Query: 154 RFIDIENMV 162
           R ++IE  V
Sbjct: 159 RCVNIEKRV 167


>Medtr7g056733.1 | GNL3L/Grn1 GTPase, putative | HC |
          chr7:20368805-20369248 | 20130731
          Length = 92

 Score = 67.0 bits (162), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 31/42 (73%), Positives = 34/42 (80%)

Query: 39 LTLNGKKKVEKDPGIPNDWPFKEQELKALEXXXXXXIDELEQ 80
          + L+GK+KVEKDPGIPNDWPFKEQELKALE      I ELEQ
Sbjct: 39 VQLSGKRKVEKDPGIPNDWPFKEQELKALEARRERAIQELEQ 80