Miyakogusa Predicted Gene

Lj1g3v1244800.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1244800.1 Non Characterized Hit- tr|I1NEF3|I1NEF3_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,76.78,0,GN3L_Grn1,Guanine nucleotide-binding protein-like 3,
N-terminal domain; MMR_HSR1,GTP binding domain;,CUFF.27075.1
         (590 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g048030.1 | guanine nucleotide-binding-like protein | HC |...   635   0.0  
Medtr2g079510.1 | nucleolar GTP-binding-like protein | HC | chr2...   211   1e-54
Medtr4g081850.1 | nucleolar GTP-binding-like protein | HC | chr4...   209   8e-54
Medtr4g050490.1 | P-loop nucleoside triphosphate hydrolase super...   122   1e-27
Medtr7g094890.1 | ribosome biogenesis GTPase A | HC | chr7:37900...    80   8e-15
Medtr7g056733.1 | GNL3L/Grn1 GTPase, putative | HC | chr7:203688...    68   3e-11

>Medtr1g048030.1 | guanine nucleotide-binding-like protein | HC |
           chr1:18178595-18172713 | 20130731
          Length = 599

 Score =  635 bits (1639), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 336/494 (68%), Positives = 380/494 (76%), Gaps = 10/494 (2%)

Query: 39  LTLNGKKKVEKDPGIPNDWPFKEQELKALEXXXXXXIDELEQXXXXXXXXXXXXXLGLLG 98
           L L+GKKKVEKDPGIPNDWPFKEQELK LE      + EL +              GL  
Sbjct: 39  LQLSGKKKVEKDPGIPNDWPFKEQELKLLEARRERALAELAKKKDERKERARKRKAGLPV 98

Query: 99  VDDSSKVVD--SNENTTFVKT-----RDTSDKAFYKDLVKVIEASDVILEVLDARDPLGT 151
            DD+S  V+  S ENT  V T     +D+SD+AF  DL  VI  SDVILEVLDARDPLGT
Sbjct: 99  DDDNSNSVETASIENTESVPTVAKTNKDSSDRAFAGDLEAVIATSDVILEVLDARDPLGT 158

Query: 152 RCVDIERVVMKMGPDKHLVLLLNKIDLVPREALEKWLKYLREELPTVAFKCSTQQQRSNL 211
           RCV+IE+ V   G  K  VLLLNKIDLVPRE++EKWLKYLREE PTVAFKCSTQQQ+SNL
Sbjct: 159 RCVNIEKRVRDSGTYKRHVLLLNKIDLVPRESVEKWLKYLREEFPTVAFKCSTQQQKSNL 218

Query: 212 GWKSSKTAKSSNTLQLSDCLGADTLLKLLKNYSRSHEIKKSITVGLVGLPNVGKSSLINS 271
           G   SK  K+SNTLQLSDCLGA+TLLKLLKNY+RS ++K SITVGLVGLPNVGKSSLINS
Sbjct: 219 G--RSKKIKTSNTLQLSDCLGAETLLKLLKNYARSDKLKTSITVGLVGLPNVGKSSLINS 276

Query: 272 LKRCHVVNVGATPGLTRSMQEVQLDKNVKLLDCPGVVMLKSKENDSSTALKNCKRIEKLE 331
           L R H V+V A+ G TRS QE++LDKNVKLLDCPGVVML S+END++ ALKNCKRIEKL 
Sbjct: 277 LMRSHAVHVSASAGSTRSKQEIRLDKNVKLLDCPGVVMLDSRENDATIALKNCKRIEKLA 336

Query: 332 DPISPVKEILKLCPSRLLVTLYKIPSFDSVDDFLQKVSTVRGKLKKGGIVDTEAAARIVL 391
           DP+SPVKEILKLCP+R+L++LYKIPSFDSVDDFLQ V+TVRGKLKKGGIVD +AAARIVL
Sbjct: 337 DPVSPVKEILKLCPARVLISLYKIPSFDSVDDFLQIVATVRGKLKKGGIVDIDAAARIVL 396

Query: 392 HDWNEGKIPYYTMPPVRDQGELSEAKIVSEFAKEFNIDDVYNSESSFIGSLKSADAFDPV 451
           HDWN GKIPYYTMPPVRDQGE SEAKIVS+F+KEFNID+VYNSE+SFIG+LK     D V
Sbjct: 397 HDWNIGKIPYYTMPPVRDQGEPSEAKIVSQFSKEFNIDEVYNSETSFIGNLKPTVELDHV 456

Query: 452 EVPSSGPLNLDEAMLEDDQQVKPSEQ-EDPXXXXXXXXXXXXXXXXXXXXKNKGNSAARR 510
           EVPSS PL  DE MLEDD+ V+ ++Q E P                    K K  SA+ +
Sbjct: 457 EVPSSCPLIFDETMLEDDKPVELAKQDEGPENVDDNDEDESMECGKEDVSKEKVKSASSK 516

Query: 511 QNEKLYTADGILNP 524
           QNEKLYTA+GILNP
Sbjct: 517 QNEKLYTAEGILNP 530


>Medtr2g079510.1 | nucleolar GTP-binding-like protein | HC |
           chr2:33482137-33476593 | 20130731
          Length = 574

 Score =  211 bits (537), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 123/321 (38%), Positives = 179/321 (55%), Gaps = 33/321 (10%)

Query: 99  VDDSSKVVDSNENTTFVKTRDTSDKAFYKDLVKVIEASDVILEVLDARDPLGTRCVDIER 158
            D++    D   +T F K +    K  + +L KVI++SDV+++V+DARDP GTRC  +E+
Sbjct: 180 ADEADGFRDLVRHTMFEKGQS---KRIWGELYKVIDSSDVVVQVIDARDPQGTRCYHLEK 236

Query: 159 VVMKMGPDKHLVLLLNKIDLVPREALEKWLKYLREELPTVAFKCSTQQQRSNLGWKSSKT 218
            + +    KH+VLLLNK DL+P  A + WL+ L +E PT+AF  S               
Sbjct: 237 HLKENCKHKHMVLLLNKCDLIPAWATKGWLRVLSKEYPTLAFHAS--------------- 281

Query: 219 AKSSNTLQLSDCLGADTLLKLLKNYSRSHEIKKSITVGLVGLPNVGKSSLINSLKRCHVV 278
                   ++   G  +LL +L+ ++R    K++I+VG VG PNVGKSS+IN+L+  +V 
Sbjct: 282 --------INKSFGKGSLLSVLRQFARLKSDKQAISVGFVGYPNVGKSSVINTLRTKNVC 333

Query: 279 NVGATPGLTRSMQEVQLDKNVKLLDCPGVVMLKSKENDSST--ALKNCKRIEKLEDPISP 336
            V   PG T+  Q + L K + L+DCPGVV      NDS T   LK   R+  L+D    
Sbjct: 334 KVAPIPGETKVWQYITLTKRIFLIDCPGVVY---HNNDSETDVVLKGVVRVTNLKDAADH 390

Query: 337 VKEILKLCPSRLLVTLYKIPSFDSVDDFLQKVSTVRGKLKKGGIVDTEAAARIVLHDWNE 396
           + E+LK      L   YKI  +   +DFL ++    GKL KGG  D   AA+++LHDW  
Sbjct: 391 IGEVLKRVKKEHLTRAYKIKEWVDENDFLLQLCKSSGKLLKGGEPDLMTAAKMILHDWQR 450

Query: 397 GKIPYYTMPPVRDQGELSEAK 417
           GKIP++  PP +D   LSE++
Sbjct: 451 GKIPFFVPPPRQDA--LSESE 469


>Medtr4g081850.1 | nucleolar GTP-binding-like protein | HC |
           chr4:31881653-31883769 | 20130731
          Length = 563

 Score =  209 bits (531), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 114/286 (39%), Positives = 163/286 (56%), Gaps = 28/286 (9%)

Query: 123 KAFYKDLVKVIEASDVILEVLDARDPLGTRCVDIERVVMKMGPDKHLVLLLNKIDLVPRE 182
           K  + +L KVI++SDV+++V+DARDP GTRC  +E+ + +    KH+VLLLNK DL+P  
Sbjct: 193 KRIWGELYKVIDSSDVVVQVIDARDPQGTRCYHLEKHLKENCKHKHMVLLLNKCDLIPAW 252

Query: 183 ALEKWLKYLREELPTVAFKCSTQQQRSNLGWKSSKTAKSSNTLQLSDCLGADTLLKLLKN 242
           A + WL+ L +E PT+AF  S                       ++   G  +LL +L+ 
Sbjct: 253 ATKGWLRVLSKEYPTLAFHAS-----------------------INKSFGKGSLLSILRQ 289

Query: 243 YSRSHEIKKSITVGLVGLPNVGKSSLINSLKRCHVVNVGATPGLTRSMQEVQLDKNVKLL 302
           ++R    K++I+VG VG PNVGKSS+IN+L+  +V  V   PG T+  Q + L K + L+
Sbjct: 290 FARLKSDKQAISVGFVGYPNVGKSSVINTLRTKNVCKVAPIPGETKVWQYITLTKRIFLI 349

Query: 303 DCPGVVMLKSKENDSST--ALKNCKRIEKLEDPISPVKEILKLCPSRLLVTLYKIPSFDS 360
           DCPGVV      NDS T   LK   R+  L+D    + E+LK      L   YKI  +  
Sbjct: 350 DCPGVVY---HNNDSETDVVLKGVVRVTNLKDAADHIGEVLKRVKKEHLTRAYKIKEWVD 406

Query: 361 VDDFLQKVSTVRGKLKKGGIVDTEAAARIVLHDWNEGKIPYYTMPP 406
            +DFL ++    GKL KGG  D   AA+++LHDW  GKIP++  PP
Sbjct: 407 ENDFLLQLCKSSGKLLKGGEPDLMTAAKMILHDWQRGKIPFFVPPP 452


>Medtr4g050490.1 | P-loop nucleoside triphosphate hydrolase
           superfamily protein | HC | chr4:17882585-17887926 |
           20130731
          Length = 589

 Score =  122 bits (306), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/365 (27%), Positives = 166/365 (45%), Gaps = 41/365 (11%)

Query: 110 ENTTFVKTRDTSDKAFYKDLVKVIEASDVILEVLDARDPLGTRCVDIERVVMKMGPDKHL 169
           EN   V T    +   ++ L +V+E SD+++ V+D+RDPL  RC D+E    ++   K+ 
Sbjct: 143 ENKKLVLTPFEKNLDIWRQLWRVVERSDLLVMVVDSRDPLFYRCPDLEAYAKEVDVHKNT 202

Query: 170 VLLLNKIDLVPREALEKWLKYLREELPTVAFKCSTQQQRSNLGWKSSKTAKSSNTLQLSD 229
           +LL+NK DL+P    EKW +Y R       F  S +   + L  K   ++++ N     +
Sbjct: 203 LLLVNKADLLPASVREKWAEYFRAHDILFIF-WSAKAATAVLEGKKLGSSQADNMASADN 261

Query: 230 ----CLGADTLLKLLKNYSRS--------------------HEIKKSITVGLVGLPNVGK 265
                 G D LL  L++ + +                          + VG VG PNVGK
Sbjct: 262 PDTKIYGRDELLARLQSEAEAIVDMRRSSGSSKSSDDNASVSSSSSHVVVGFVGYPNVGK 321

Query: 266 SSLINSLKRCHVVNVGATPGLTRSMQEVQLDKNVKLLDCPGVVMLKSKENDSSTALKNCK 325
           SS IN+L       V +TPG T+  Q + + + + L DCPG+V      +          
Sbjct: 322 SSTINALVGQKKTGVTSTPGKTKHFQTLIISEKLILCDCPGLVFPSFSSSRYEMITCGVL 381

Query: 326 RIEKLEDPISPVKEILKLCPSRLLVTLYKIP-----SFDS------VDDFLQKVSTVRGK 374
            I+++      V+ +    P  ++  +Y I      S++S        + L+     RG+
Sbjct: 382 PIDRMTQHRECVQVVANRVPRHVIEEIYNISLPKPKSYESQSRPPLASELLRTYCASRGQ 441

Query: 375 LKKGGIVDTEAAARIVLHDWNEGKIPYYTMPPVRDQGELSEAKIVSEFAKEFNIDDVYNS 434
               G+ D   A+R +L D+ +GK+P+Y MPP      LS  ++ SE + E +  + + S
Sbjct: 442 TTSSGLPDETRASRQILKDYIDGKLPHYEMPP-----GLSTQELASEDSNEHDQVNPHVS 496

Query: 435 ESSFI 439
           ++S I
Sbjct: 497 DASDI 501


>Medtr7g094890.1 | ribosome biogenesis GTPase A | HC |
           chr7:37900080-37894545 | 20130731
          Length = 373

 Score = 79.7 bits (195), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 79/295 (26%), Positives = 133/295 (45%), Gaps = 46/295 (15%)

Query: 127 KDLVKVIEASDVILEVLDARDPLGTRCVDIERVVMKMGPDKHLVLLLNKIDLVPREALEK 186
           K+L + ++  DV++EV D R PL T    ++   + +G +K  +L+LN+ D++       
Sbjct: 109 KELKEQLKLMDVVIEVRDGRIPLSTSHPQMD---LWLG-NKKRILVLNREDMISTADRNA 164

Query: 187 WLKYLREELPTVAFKCSTQQQRSNLGWKSSKTAKSSNTLQLSDCLGADTLLKLLKNYSRS 246
           W +Y       V F          LG  + K  +      L+  L AD       N  R 
Sbjct: 165 WAEYFTRHGTKVVF------SNGQLGMGTLKLCR------LAKELAADV------NVKRR 206

Query: 247 HE--IKKSITVGLVGLPNVGKSSLINSLKRCHVVNVGATPGLTRSMQEVQLDKNVKLLDC 304
            +  + + +  G+VG PNVGKSSLIN L +  +      PG+TR ++ V+  K+++LLD 
Sbjct: 207 AKGLLPRPVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRDLRWVRFGKDLELLDS 266

Query: 305 PGVVMLKSKENDSSTALKNCKRIEKLEDPISPVKEILKLCPSRLLVTLYKIPSFDSVDDF 364
           PG++ ++  +  ++  L  C  I +    ++ V  I       L+  L K+P+     D 
Sbjct: 267 PGILPMRISDQSAAIKLAICDDIGERSYDVADVAAI-------LVQMLTKLPAVGR--DA 317

Query: 365 LQKVSTVRGKLKKGGIV-----------DTEAAARIVLHDWNEGKIPYYTM--PP 406
           L K    R   + G I            D   AA  VL D+ +G+  + ++  PP
Sbjct: 318 LCKRYKFRVDSECGKIFIEKLALHLFNGDVHQAAYRVLSDFRKGRFGWTSLERPP 372


>Medtr7g056733.1 | GNL3L/Grn1 GTPase, putative | HC |
          chr7:20368805-20369248 | 20130731
          Length = 92

 Score = 67.8 bits (164), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 31/42 (73%), Positives = 34/42 (80%)

Query: 39 LTLNGKKKVEKDPGIPNDWPFKEQELKALEXXXXXXIDELEQ 80
          + L+GK+KVEKDPGIPNDWPFKEQELKALE      I ELEQ
Sbjct: 39 VQLSGKRKVEKDPGIPNDWPFKEQELKALEARRERAIQELEQ 80