Miyakogusa Predicted Gene

Lj1g3v1233770.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1233770.1 CUFF.27039.1
         (123 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g095260.1 | Rpp20 subunit of nuclear RNase MRP and P prote...   213   3e-56
Medtr3g095240.1 | DNA-binding protein alba protein | HC | chr3:4...   211   1e-55
Medtr3g095250.1 | DNA-binding protein alba protein | HC | chr3:4...   210   2e-55
Medtr7g059030.1 | DNA-binding protein alba protein | HC | chr7:2...   160   2e-40

>Medtr3g095260.1 | Rpp20 subunit of nuclear RNase MRP and P protein
           | HC | chr3:43535201-43539919 | 20130731
          Length = 245

 Score =  213 bits (543), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 107/123 (86%), Positives = 109/123 (88%)

Query: 1   MDRYQRVEKPKADSPINENEIRITSQGRMRNYITYATTLLQEKGSDEIVLKAMGRAINKT 60
           MDRYQRVEKPKADSPINENEIRIT+QGRMRNYITYATTL QEKGSDEIV+KAMGRAINKT
Sbjct: 1   MDRYQRVEKPKADSPINENEIRITTQGRMRNYITYATTLFQEKGSDEIVVKAMGRAINKT 60

Query: 61  VMITELIKRRIVGLHQNTLIGSTDITDTWXXXXXXXXXXXTTRHVSMITINLSKKELDTS 120
           VMITELIKRRIVGLHQNT IGSTDITDTW           TTRHVSMITI LSKKELDTS
Sbjct: 61  VMITELIKRRIVGLHQNTQIGSTDITDTWEPLEEGLLPLETTRHVSMITITLSKKELDTS 120

Query: 121 STG 123
           STG
Sbjct: 121 STG 123


>Medtr3g095240.1 | DNA-binding protein alba protein | HC |
           chr3:43522165-43525256 | 20130731
          Length = 245

 Score =  211 bits (537), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 105/123 (85%), Positives = 109/123 (88%)

Query: 1   MDRYQRVEKPKADSPINENEIRITSQGRMRNYITYATTLLQEKGSDEIVLKAMGRAINKT 60
           MDRYQRVEKPKADSPINENEIRIT+QGRMRNYITYATTL QEKG++EIVLKAMGRAINKT
Sbjct: 1   MDRYQRVEKPKADSPINENEIRITTQGRMRNYITYATTLFQEKGTEEIVLKAMGRAINKT 60

Query: 61  VMITELIKRRIVGLHQNTLIGSTDITDTWXXXXXXXXXXXTTRHVSMITINLSKKELDTS 120
           V ITELIKRRIVGLHQNT+IGSTDITDTW           TTRHVSMITI LSKKELDTS
Sbjct: 61  VTITELIKRRIVGLHQNTIIGSTDITDTWEPLEEGLLPLETTRHVSMITITLSKKELDTS 120

Query: 121 STG 123
           STG
Sbjct: 121 STG 123


>Medtr3g095250.1 | DNA-binding protein alba protein | HC |
           chr3:43527636-43531134 | 20130731
          Length = 239

 Score =  210 bits (535), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 104/123 (84%), Positives = 108/123 (87%)

Query: 1   MDRYQRVEKPKADSPINENEIRITSQGRMRNYITYATTLLQEKGSDEIVLKAMGRAINKT 60
           MDRYQRVEKPKAD PINENEIRIT+QGRMRNYITYATTL QEKG+D+IVLKAMGRAINKT
Sbjct: 1   MDRYQRVEKPKADGPINENEIRITTQGRMRNYITYATTLFQEKGADDIVLKAMGRAINKT 60

Query: 61  VMITELIKRRIVGLHQNTLIGSTDITDTWXXXXXXXXXXXTTRHVSMITINLSKKELDTS 120
           VMITELIKRRIVGLHQNT +GSTDITDTW           TTRHVSMITI LSKKELDTS
Sbjct: 61  VMITELIKRRIVGLHQNTQVGSTDITDTWEPLEEGLLPLETTRHVSMITITLSKKELDTS 120

Query: 121 STG 123
           STG
Sbjct: 121 STG 123


>Medtr7g059030.1 | DNA-binding protein alba protein | HC |
           chr7:21304062-21298736 | 20130731
          Length = 364

 Score =  160 bits (406), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 78/123 (63%), Positives = 94/123 (76%)

Query: 1   MDRYQRVEKPKADSPINENEIRITSQGRMRNYITYATTLLQEKGSDEIVLKAMGRAINKT 60
           MDRYQ+VEKPK ++PINENEIRIT+QG +RNYITYAT+LLQEK + EIVLKAMG+AI+KT
Sbjct: 1   MDRYQKVEKPKPETPINENEIRITTQGAIRNYITYATSLLQEKQAKEIVLKAMGQAISKT 60

Query: 61  VMITELIKRRIVGLHQNTLIGSTDITDTWXXXXXXXXXXXTTRHVSMITINLSKKELDTS 120
           V I E++K+RI  LHQ+T I S  ITD W            TRHVSMI+I LS  EL+T+
Sbjct: 61  VAIAEILKKRISPLHQDTAISSVSITDVWEPIEEGLVPVEMTRHVSMISITLSTGELNTN 120

Query: 121 STG 123
           S G
Sbjct: 121 SPG 123