Miyakogusa Predicted Gene

Lj1g3v1233750.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1233750.1 Non Characterized Hit- tr|I3S7L0|I3S7L0_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,98.84,0,seg,NULL;
SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL; DUF502,Protein of
unknown function DUF502,CUFF.27035.1
         (258 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g095210.1 | like-COV protein | HC | chr3:43501196-43508582...   463   e-131
Medtr8g103420.1 | like-COV protein | HC | chr8:43512895-43519018...   347   7e-96
Medtr8g103400.1 | like-COV protein | HC | chr8:43504245-43510083...   342   3e-94
Medtr1g022150.1 | like-COV protein | HC | chr1:6887607-6884866 |...   306   2e-83
Medtr8g103400.2 | like-COV protein | HC | chr8:43504245-43508851...   241   4e-64

>Medtr3g095210.1 | like-COV protein | HC | chr3:43501196-43508582 |
           20130731
          Length = 258

 Score =  463 bits (1192), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 227/259 (87%), Positives = 238/259 (91%), Gaps = 2/259 (0%)

Query: 1   MPEEKESTSIPLSQAEDNASCDDPEDPAKXXXXXXXXXTRRACCFVLQSWFSKKFMTGCV 60
           M EEKESTSIPLSQA DN SC+DPEDPAK         TRRACCFVLQSW SKKFMTGCV
Sbjct: 1   MAEEKESTSIPLSQA-DNVSCEDPEDPAKTPPTSPNSSTRRACCFVLQSWVSKKFMTGCV 59

Query: 61  VLFPVAVTFFITWWFIQFVDGFFSPIYSRLGIDIFGLGFITSLAFVFLIGVFVSSWIGGT 120
           VLFPVAVTFFITWWFIQFVDGFFSP+YS  G++IFGLGFITSLAFVF+IGVFVSSW+G T
Sbjct: 60  VLFPVAVTFFITWWFIQFVDGFFSPLYSSFGVEIFGLGFITSLAFVFVIGVFVSSWMGAT 119

Query: 121 VFWIGEWFIKQMPLVRHIYSASKQISAAISPDQNTTAFKEVAIIRHPRVGEYAFGFITST 180
           VFWIGEW IKQMPLVRHIYSASKQISAAISPDQNTTAFKEVAIIRHPRVGEYAFGFITST
Sbjct: 120 VFWIGEWLIKQMPLVRHIYSASKQISAAISPDQNTTAFKEVAIIRHPRVGEYAFGFITST 179

Query: 181 VILQKENEDEELCSVFVPTNHLYIGDILLVNSKDVIRPNLSIREGIEIIVSGGMTMPQLI 240
           V LQKENEDEELCSVF+PTNHLYIGDI+L+NSKDVIRPNLSIREGIEIIVSGGMTMPQ+I
Sbjct: 180 VTLQKENEDEELCSVFIPTNHLYIGDIILINSKDVIRPNLSIREGIEIIVSGGMTMPQVI 239

Query: 241 SPVERVTRPNERI-LNRIG 258
           SP+ERV  PNERI LNRIG
Sbjct: 240 SPIERVAHPNERISLNRIG 258


>Medtr8g103420.1 | like-COV protein | HC | chr8:43512895-43519018 |
           20130731
          Length = 265

 Score =  347 bits (889), Expect = 7e-96,   Method: Compositional matrix adjust.
 Identities = 164/248 (66%), Positives = 201/248 (81%), Gaps = 9/248 (3%)

Query: 10  IPLSQAEDNASCDDPEDPAKXXXXXXXXXTRRACCFVLQSWFSKKFMTGCVVLFPVAVTF 69
           IP++ + D+     P   +           R     V+QSW SKKFMTGCV+L P+A+TF
Sbjct: 22  IPVANSGDDTDASRPLASSSSMHHS----GRETFSKVVQSWASKKFMTGCVILLPIAITF 77

Query: 70  FITWWFIQFVDGFFSPIYSRLGIDIFGLGFITSLAFVFLIGVFVSSWIGGTVFWIGEWFI 129
           +ITWWFI FVDGFFSPIY++LGIDIFGLGFITS+ F+FL+GVF+SSW+G +V  +GEWFI
Sbjct: 78  YITWWFIHFVDGFFSPIYAQLGIDIFGLGFITSITFIFLVGVFMSSWLGASVLGLGEWFI 137

Query: 130 KQMPLVRHIYSASKQISAAISPDQNTTAFKEVAIIRHPRVGEYAFGFITSTVILQKENED 189
           K+MPLVRHIY+ASKQISAAISPDQN+ AFKEVAIIRHPRVGEYAFGFITS+V+LQ  + D
Sbjct: 138 KRMPLVRHIYNASKQISAAISPDQNSQAFKEVAIIRHPRVGEYAFGFITSSVVLQSYSGD 197

Query: 190 EELCSVFVPTNHLYIGDILLVNSKDVIRPNLSIREGIEIIVSGGMTMPQLISPVE----- 244
           EELC V+VPTNHLYIGDI LVN+KDVIRP LS+REGIEI+VSGGM+MPQ++S +E     
Sbjct: 198 EELCCVYVPTNHLYIGDIFLVNTKDVIRPTLSVREGIEIVVSGGMSMPQILSTLESRVPA 257

Query: 245 RVTRPNER 252
           +++RP+ R
Sbjct: 258 QISRPDRR 265


>Medtr8g103400.1 | like-COV protein | HC | chr8:43504245-43510083 |
           20130731
          Length = 270

 Score =  342 bits (876), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 162/219 (73%), Positives = 191/219 (87%), Gaps = 7/219 (3%)

Query: 40  RRACCFVLQSWFSKKFMTGCVVLFPVAVTFFITWWFIQFVDGFFSPIYSRLGIDIFGLGF 99
           R     V+QSW SKKFMTGCV+LFP+A+TF+ITWWFI FVDGFFSPIY  LGI+IFGLGF
Sbjct: 53  RETFSKVVQSWASKKFMTGCVILFPIAITFYITWWFIHFVDGFFSPIYVHLGINIFGLGF 112

Query: 100 ITSLAFVFLIGVFVSSWIGGTVFWIGEWFIKQMPLVRHIYSASKQISAAISPDQNTTAFK 159
           ITS+ F+FLIG+F+SSW+G +V  +GEWFIK+MPLVRHIY+ASKQISAAISPDQN+ AFK
Sbjct: 113 ITSITFIFLIGIFMSSWLGASVLGLGEWFIKRMPLVRHIYNASKQISAAISPDQNSQAFK 172

Query: 160 EVAIIRHPRVGEYAFGFITSTVILQKENEDEELCSVFVPTNHLYIGDILLVNSKDVIRPN 219
           EVAIIRHPRVGEYA GFITS+V+LQ  + DEELC V+VPTNHLYIGDI LVN+KDVIRPN
Sbjct: 173 EVAIIRHPRVGEYALGFITSSVVLQTYSGDEELCCVYVPTNHLYIGDIFLVNTKDVIRPN 232

Query: 220 LSIREGIEIIVSGGMTMPQLIS------PVERVTRPNER 252
           LS+REGIEI+VSGGM+MPQ++S      PVE ++RP+ R
Sbjct: 233 LSVREGIEIVVSGGMSMPQILSTLDSHVPVE-ISRPDRR 270


>Medtr1g022150.1 | like-COV protein | HC | chr1:6887607-6884866 |
           20130731
          Length = 266

 Score =  306 bits (783), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 134/214 (62%), Positives = 183/214 (85%)

Query: 40  RRACCFVLQSWFSKKFMTGCVVLFPVAVTFFITWWFIQFVDGFFSPIYSRLGIDIFGLGF 99
           + A   V++SW SKKFMTGCV+L P+A+TF+ITW F++FVDGFFSP+Y+ LGI++FGLGF
Sbjct: 44  QEAFSKVIRSWASKKFMTGCVILLPIAITFYITWGFVRFVDGFFSPVYNHLGINVFGLGF 103

Query: 100 ITSLAFVFLIGVFVSSWIGGTVFWIGEWFIKQMPLVRHIYSASKQISAAISPDQNTTAFK 159
           +TS+ F+FL+G+F+SSW+G +V  +GE FIK+MPLV +IY+ASKQISAAISPDQ++ AFK
Sbjct: 104 VTSITFIFLVGIFMSSWLGASVLTLGELFIKKMPLVSYIYAASKQISAAISPDQSSNAFK 163

Query: 160 EVAIIRHPRVGEYAFGFITSTVILQKENEDEELCSVFVPTNHLYIGDILLVNSKDVIRPN 219
           EVA++RHPR+GEYA GFITSTVIL+K  ++EEL  V++PTNHLY+GDI LV+  D++RPN
Sbjct: 164 EVALVRHPRIGEYALGFITSTVILRKSRDEEELYCVYIPTNHLYLGDIFLVSPNDILRPN 223

Query: 220 LSIREGIEIIVSGGMTMPQLISPVERVTRPNERI 253
           LS+REGIEI++SGGM++PQ+++  +   +   RI
Sbjct: 224 LSVREGIEIVISGGMSIPQVMTTGDAHAKLASRI 257


>Medtr8g103400.2 | like-COV protein | HC | chr8:43504245-43508851 |
           20130731
          Length = 199

 Score =  241 bits (616), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 112/145 (77%), Positives = 130/145 (89%)

Query: 40  RRACCFVLQSWFSKKFMTGCVVLFPVAVTFFITWWFIQFVDGFFSPIYSRLGIDIFGLGF 99
           R     V+QSW SKKFMTGCV+LFP+A+TF+ITWWFI FVDGFFSPIY  LGI+IFGLGF
Sbjct: 53  RETFSKVVQSWASKKFMTGCVILFPIAITFYITWWFIHFVDGFFSPIYVHLGINIFGLGF 112

Query: 100 ITSLAFVFLIGVFVSSWIGGTVFWIGEWFIKQMPLVRHIYSASKQISAAISPDQNTTAFK 159
           ITS+ F+FLIG+F+SSW+G +V  +GEWFIK+MPLVRHIY+ASKQISAAISPDQN+ AFK
Sbjct: 113 ITSITFIFLIGIFMSSWLGASVLGLGEWFIKRMPLVRHIYNASKQISAAISPDQNSQAFK 172

Query: 160 EVAIIRHPRVGEYAFGFITSTVILQ 184
           EVAIIRHPRVGEYA GFITS+V+LQ
Sbjct: 173 EVAIIRHPRVGEYALGFITSSVVLQ 197