Miyakogusa Predicted Gene

Lj1g3v1221310.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1221310.2 Non Characterized Hit- tr|I1KRM4|I1KRM4_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.25448 PE,32.91,4e-19,no
description,Tetratricopeptide-like helical; TPR-like,NULL; seg,NULL;
TPR_REGION,Tetratricopeptide,CUFF.27010.2
         (215 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g095070.1 | TPR superfamily protein | HC | chr3:43398784-4...   263   9e-71
Medtr7g100328.1 | TPR superfamily protein | HC | chr7:40271017-4...   125   3e-29
Medtr1g067600.1 | hypothetical protein | HC | chr1:29181747-2918...    68   6e-12

>Medtr3g095070.1 | TPR superfamily protein | HC |
           chr3:43398784-43395888 | 20130731
          Length = 333

 Score =  263 bits (672), Expect = 9e-71,   Method: Compositional matrix adjust.
 Identities = 139/195 (71%), Positives = 148/195 (75%), Gaps = 12/195 (6%)

Query: 3   CCLSKNTAFAVAAVPSVXXXXXXXXXXXXXXXXXXXXXXXXDSRNVEALKVIVYGKIRRG 62
            C S+  AFAV+ VPSV                        DSRNVEALKVIVYGKIRRG
Sbjct: 91  ACFSRKPAFAVS-VPSVDSAEILEEKILEK-----------DSRNVEALKVIVYGKIRRG 138

Query: 63  KCNEAVKFVESLIDLEPNEVEWKLLLALCYETMGELSKAKTLFREILEKMPLQVRALHGL 122
           KC EA KFV+ LID EPNEVEW+LLLALCYETMG LSKAK L+ EILE  PL VRALHGL
Sbjct: 139 KCKEAEKFVKRLIDEEPNEVEWRLLLALCYETMGYLSKAKGLYLEILENWPLFVRALHGL 198

Query: 123 AMVMHKNHEGPAVFEMLNKARELASNENRVTEERNIRILIAQMLVVQGNLEEGLKRFQDL 182
           AMVMHKN EGPAVFEMLNKA ELA NEN+VTEERNI+IL AQM VVQG+LEEGLKR QDL
Sbjct: 199 AMVMHKNKEGPAVFEMLNKAVELAINENKVTEERNIKILTAQMRVVQGDLEEGLKRCQDL 258

Query: 183 IDENYRDFRPYFCQG 197
           ID+N RDFRPY CQG
Sbjct: 259 IDQNPRDFRPYLCQG 273


>Medtr7g100328.1 | TPR superfamily protein | HC |
           chr7:40271017-40272356 | 20130731
          Length = 351

 Score =  125 bits (314), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 64/156 (41%), Positives = 99/156 (63%), Gaps = 5/156 (3%)

Query: 47  NVEALKVIVYGKIRRGKCNEAVKFVESLIDLEPNEVEWKLLLALCYETMGELSKAKTLFR 106
           + EAL+ ++  KI+  + +EA+  ++ LI++EP E+EW+LL A  Y    +   AK LF 
Sbjct: 140 DAEALRALMEVKIKAREIDEAIGVIDRLIEIEPEEMEWRLLKANMYIYNDDHESAKKLFE 199

Query: 107 EILEKMPLQVRALHGLAMVMHKNHEGP-----AVFEMLNKARELASNENRVTEERNIRIL 161
           EIL+K PL+V A HGL M   +++E        + + + KA EL   + +V++ R+ R+L
Sbjct: 200 EILKKDPLRVEAFHGLVMASSESNEQSDEPLKGLLKRVEKAMELCKKQKKVSDVRDFRLL 259

Query: 162 IAQMLVVQGNLEEGLKRFQDLIDENYRDFRPYFCQG 197
           +AQ+ V++GN  E LK +QDL+ E  RDFRPY CQG
Sbjct: 260 VAQIKVMEGNFSEALKAYQDLVKEEPRDFRPYLCQG 295


>Medtr1g067600.1 | hypothetical protein | HC |
           chr1:29181747-29180231 | 20130731
          Length = 355

 Score = 68.2 bits (165), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 50/161 (31%), Positives = 84/161 (52%), Gaps = 5/161 (3%)

Query: 44  DSRNVEALKVIVYGKIRRGKCNEAVKFVESLIDLEPNEVEWKLLLALCYETMGELSKAKT 103
           +S +  AL+ ++   ++  K +EA++ VE L++LEP E +  LL +  +   GE   AK 
Sbjct: 147 NSNDANALRSLIEENVKARKLSEAIRAVERLMELEPEEFDLLLLKSHLHSHNGEHELAKK 206

Query: 104 LFREILEKMPLQVRALHGLAMVMHKNHEGPAVFEMLNKARELAS--NENRV-TEERNIRI 160
            F   L++ P    A  GL M   +  E    F  LN+  E+     E ++ +E R  ++
Sbjct: 207 GFEFTLQQDPFNSEAYRGLLMANSELKEPMEGF--LNRVDEVVKFFEEKKMESEAREFKL 264

Query: 161 LIAQMLVVQGNLEEGLKRFQDLIDENYRDFRPYFCQGCSCS 201
           LIAQ+ V++ +    LK +++++ E   DFRPY CQ    S
Sbjct: 265 LIAQVKVMEEDYSGALKVYEEIVKEEPSDFRPYLCQSVVYS 305