Miyakogusa Predicted Gene

Lj1g3v1219020.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1219020.1 Non Characterized Hit- tr|I3SBT6|I3SBT6_MEDTR
Uncharacterized protein OS=Medicago truncatula PE=4
SV,68.06,2e-19,AvrRpt-cleavage,Pathogenic type III effector avirulence
factor Avr cleavage site; seg,NULL,CUFF.26997.1
         (102 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g094970.1 | pathogenic type III effector avirulence factor...   144   1e-35
Medtr8g091930.1 | RPM1-interacting protein 4 (RIN4) family prote...   127   2e-30
Medtr8g091930.2 | RPM1-interacting protein 4 (RIN4) family prote...   121   1e-28
Medtr8g091930.4 | RPM1-interacting protein 4 (RIN4) family prote...   101   2e-22
Medtr8g091930.3 | RPM1-interacting protein 4 (RIN4) family prote...    95   1e-20
Medtr3g094970.2 | pathogenic type III effector avirulence factor...    86   6e-18
Medtr2g036020.1 | pathogenic type III effector avirulence factor...    81   2e-16
Medtr2g035990.1 | pathogenic type III effector avirulence factor...    78   2e-15
Medtr2g035950.1 | pathogenic type III effector avirulence factor...    72   9e-14
Medtr3g094890.1 | RPM1-interacting protein 4 (RIN4) family prote...    54   3e-08

>Medtr3g094970.1 | pathogenic type III effector avirulence factor
           Avr AvrRpt-cleavage: cleavage site protein | HC |
           chr3:43352349-43349559 | 20130731
          Length = 100

 Score =  144 bits (364), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 70/102 (68%), Positives = 78/102 (76%), Gaps = 2/102 (1%)

Query: 1   MDQSKEKNAPWLSVPQFGDWDQKGPLPDYSMDFSKIREMRKQNKTNISRASLGNXXXXXX 60
           M+Q+KEK APWLSVPQFG+WDQKGPLPDYSMDFSKIREMRKQNKTN SRASLGN      
Sbjct: 1   MEQNKEKIAPWLSVPQFGEWDQKGPLPDYSMDFSKIREMRKQNKTNASRASLGN-EEEFA 59

Query: 61  XXXXXXINTGHTEPQQHSNYHQANSPTTRRSFFSYFNCCVKA 102
                 +   H+EP QH +YH+ NS   RRSF SYFNCC+KA
Sbjct: 60  APTQKNVKADHSEP-QHPHYHKTNSAVRRRSFMSYFNCCIKA 100


>Medtr8g091930.1 | RPM1-interacting protein 4 (RIN4) family protein
           | HC | chr8:38360853-38359248 | 20130731
          Length = 110

 Score =  127 bits (320), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 66/108 (61%), Positives = 75/108 (69%), Gaps = 6/108 (5%)

Query: 1   MDQSKEKNAPWLSVPQFGDWDQKGPLPDYSMDFSKIREMRKQNKTNISRASLGNXXXXXX 60
           MD  KEKN  WLSVPQFGDWDQKG +PDYS+DFSKIRE RKQNKTNISRASLGN      
Sbjct: 3   MDARKEKNGGWLSVPQFGDWDQKGQVPDYSLDFSKIRETRKQNKTNISRASLGNDEEFNI 62

Query: 61  XXXXXXINTG----HTEPQQHS--NYHQANSPTTRRSFFSYFNCCVKA 102
                  +        + QQH+   +HQ +SPTTR+SF SYFNCCVK+
Sbjct: 63  DSTSSSTSNTVSSIEQQQQQHTPRYHHQTHSPTTRKSFLSYFNCCVKS 110


>Medtr8g091930.2 | RPM1-interacting protein 4 (RIN4) family protein
           | HC | chr8:38360853-38359248 | 20130731
          Length = 109

 Score =  121 bits (303), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 65/108 (60%), Positives = 74/108 (68%), Gaps = 7/108 (6%)

Query: 1   MDQSKEKNAPWLSVPQFGDWDQKGPLPDYSMDFSKIREMRKQNKTNISRASLGNXXXXXX 60
           MD  KE N  WLSVPQFGDWDQKG +PDYS+DFSKIRE RKQNKTNISRASLGN      
Sbjct: 3   MDARKE-NGGWLSVPQFGDWDQKGQVPDYSLDFSKIRETRKQNKTNISRASLGNDEEFNI 61

Query: 61  XXXXXXINTG----HTEPQQHS--NYHQANSPTTRRSFFSYFNCCVKA 102
                  +        + QQH+   +HQ +SPTTR+SF SYFNCCVK+
Sbjct: 62  DSTSSSTSNTVSSIEQQQQQHTPRYHHQTHSPTTRKSFLSYFNCCVKS 109


>Medtr8g091930.4 | RPM1-interacting protein 4 (RIN4) family
          protein | HC | chr8:38360853-38359248 | 20130731
          Length = 100

 Score =  101 bits (251), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 55/95 (57%), Positives = 62/95 (65%), Gaps = 6/95 (6%)

Query: 1  MDQSKEKNAPWLSVPQFGDWDQKGPLPDYSMDFSKIREMRKQNKTNISRASLGNXXXXXX 60
          MD  KEKN  WLSVPQFGDWDQKG +PDYS+DFSKIRE RKQNKTNISRASLGN      
Sbjct: 3  MDARKEKNGGWLSVPQFGDWDQKGQVPDYSLDFSKIRETRKQNKTNISRASLGNDEEFNI 62

Query: 61 XXXXXXINTG----HTEPQQHS--NYHQANSPTTR 89
                 +        + QQH+   +HQ +SPT R
Sbjct: 63 DSTSSSTSNTVSSIEQQQQQHTPRYHHQTHSPTVR 97


>Medtr8g091930.3 | RPM1-interacting protein 4 (RIN4) family
          protein | HC | chr8:38360853-38359248 | 20130731
          Length = 99

 Score = 94.7 bits (234), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 54/95 (56%), Positives = 61/95 (64%), Gaps = 7/95 (7%)

Query: 1  MDQSKEKNAPWLSVPQFGDWDQKGPLPDYSMDFSKIREMRKQNKTNISRASLGNXXXXXX 60
          MD  KE N  WLSVPQFGDWDQKG +PDYS+DFSKIRE RKQNKTNISRASLGN      
Sbjct: 3  MDARKE-NGGWLSVPQFGDWDQKGQVPDYSLDFSKIRETRKQNKTNISRASLGNDEEFNI 61

Query: 61 XXXXXXINTG----HTEPQQHS--NYHQANSPTTR 89
                 +        + QQH+   +HQ +SPT R
Sbjct: 62 DSTSSSTSNTVSSIEQQQQQHTPRYHHQTHSPTVR 96


>Medtr3g094970.2 | pathogenic type III effector avirulence factor
           Avr AvrRpt-cleavage: cleavage site protein | HC |
           chr3:43352349-43349580 | 20130731
          Length = 70

 Score = 86.3 bits (212), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 44/72 (61%), Positives = 49/72 (68%), Gaps = 2/72 (2%)

Query: 31  MDFSKIREMRKQNKTNISRASLGNXXXXXXXXXXXXINTGHTEPQQHSNYHQANSPTTRR 90
           MDFSKIREMRKQNKTN SRASLGN            +   H+EP QH +YH+ NS   RR
Sbjct: 1   MDFSKIREMRKQNKTNASRASLGN-EEEFAAPTQKNVKADHSEP-QHPHYHKTNSAVRRR 58

Query: 91  SFFSYFNCCVKA 102
           SF SYFNCC+KA
Sbjct: 59  SFMSYFNCCIKA 70


>Medtr2g036020.1 | pathogenic type III effector avirulence factor
           Avr AvrRpt-cleavage: cleavage site protein | LC |
           chr2:15270423-15272655 | 20130731
          Length = 86

 Score = 80.9 bits (198), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 45/101 (44%), Positives = 59/101 (58%), Gaps = 16/101 (15%)

Query: 1   MDQSKEKNAPWLSVPQFGDWDQKGPLPDYSMDFSKIREMRKQNKTNISRASLGNXXXXXX 60
           M++  E+N+P   VP+FG+WDQKGP+ DYSMDFSKI+E RKQ K      SLGN      
Sbjct: 1   MERHSEENSPCPPVPRFGEWDQKGPIRDYSMDFSKIQEARKQLK------SLGN------ 48

Query: 61  XXXXXXINTGHTEPQQHSNYHQANSPTTRRSFFSYFNCCVK 101
                 +       Q+    H A SPT R+SF  +F+CC+K
Sbjct: 49  ---EEELKASFRHIQRQRTEHDA-SPTRRKSFLKWFSCCIK 85


>Medtr2g035990.1 | pathogenic type III effector avirulence factor
           Avr AvrRpt-cleavage: cleavage site protein | LC |
           chr2:15258211-15259753 | 20130731
          Length = 86

 Score = 78.2 bits (191), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 43/101 (42%), Positives = 60/101 (59%), Gaps = 16/101 (15%)

Query: 1   MDQSKEKNAPWLSVPQFGDWDQKGPLPDYSMDFSKIREMRKQNKTNISRASLGNXXXXXX 60
           M++  E+N+P   VP+FG+WDQKGP+ DYSMDFSKI+E RKQ+K      SLGN      
Sbjct: 1   MERHTEENSPCPPVPRFGEWDQKGPMRDYSMDFSKIQEARKQHK------SLGN------ 48

Query: 61  XXXXXXINTGHTEPQQHSNYHQANSPTTRRSFFSYFNCCVK 101
                 +       Q+  +  +A SP  R+SF  +F+CC+K
Sbjct: 49  ---AEELKASFQHIQRQRSEREA-SPMRRKSFMKWFSCCIK 85


>Medtr2g035950.1 | pathogenic type III effector avirulence factor
           Avr AvrRpt-cleavage: cleavage site protein | LC |
           chr2:15243370-15244701 | 20130731
          Length = 86

 Score = 72.4 bits (176), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 41/101 (40%), Positives = 59/101 (58%), Gaps = 16/101 (15%)

Query: 1   MDQSKEKNAPWLSVPQFGDWDQKGPLPDYSMDFSKIREMRKQNKTNISRASLGNXXXXXX 60
           M++  ++N+P   VP+FG+WDQK P+ DYSMDFSKI+E RK  K      SLGN      
Sbjct: 1   MERHTKENSPCPPVPRFGEWDQKSPIRDYSMDFSKIQEARKLEK------SLGNEEELKA 54

Query: 61  XXXXXXINTGHTEPQQHSNYHQANSPTTRRSFFSYFNCCVK 101
                  +  H + Q+     + +SPT R+SF  +F+CC+K
Sbjct: 55  -------SFRHIQRQRS---ERDSSPTRRKSFMKWFSCCIK 85


>Medtr3g094890.1 | RPM1-interacting protein 4 (RIN4) family protein
           | LC | chr3:43322411-43321363 | 20130731
          Length = 82

 Score = 53.9 bits (128), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 33/96 (34%), Positives = 46/96 (47%), Gaps = 16/96 (16%)

Query: 6   EKNAPWLSVPQFGDWDQKGPLPDYSMDFSKIREMRKQNKTNISRASLGNXXXXXXXXXXX 65
           +KNAP+ S+PQF  W QK P  D SM  SKI++ +K N+     ASLGN           
Sbjct: 2   QKNAPYQSLPQFEKWIQKPPFSDSSMYNSKIKKTKKPNRG----ASLGNEEEF------- 50

Query: 66  XINTGHTEPQQHSNYHQANSPTTRRSFFSYFNCCVK 101
                     ++    + N    RR+   YF+CC+K
Sbjct: 51  -----KVHIMKNKKTEETNISKKRRNLLKYFSCCIK 81