Miyakogusa Predicted Gene
- Lj1g3v1219010.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v1219010.1 Non Characterized Hit- tr|I1JY81|I1JY81_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.4107 PE=,95.92,0,P-loop
containing nucleoside triphosphate hydrolases,NULL; TGS-like,TGS-like;
small_GTP: small GTP-b,CUFF.26998.1
(368 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr3g094880.1 | developmentally regulated GTP-binding protein ... 664 0.0
Medtr8g020210.1 | developmentally regulated GTP-binding protein ... 371 e-103
Medtr8g020210.2 | developmentally regulated GTP-binding protein ... 371 e-103
Medtr2g019790.1 | Obg family GTPase CgtA | HC | chr2:6528744-652... 69 5e-12
Medtr2g019790.2 | Obg family GTPase CgtA | HC | chr2:6528707-652... 69 5e-12
Medtr1g023160.1 | GTP-binding protein Obg2, putative | HC | chr1... 61 2e-09
Medtr1g073010.1 | Obg family GTPase CgtA | HC | chr1:32424577-32... 53 6e-07
Medtr2g078050.2 | nucleolar GTP-binding-like protein | HC | chr2... 50 2e-06
Medtr8g018150.1 | nucleolar GTP-binding-like protein | HC | chr8... 50 2e-06
Medtr2g078050.1 | nucleolar GTP-binding-like protein | HC | chr2... 50 2e-06
>Medtr3g094880.1 | developmentally regulated GTP-binding protein |
HC | chr3:43301025-43311806 | 20130731
Length = 368
Score = 664 bits (1714), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 324/368 (88%), Positives = 334/368 (90%)
Query: 1 MATVMQKIKDIEDEMAKTQKNXXXXXXXXXXXXXXXXXXXXXXXPTTKXXXXXXXXFDVT 60
M+TVMQKIKDIEDEMAKTQKN PTTK FDVT
Sbjct: 1 MSTVMQKIKDIEDEMAKTQKNKATAHHLGLLKAKLAKLRRELLTPTTKGGGGAGEGFDVT 60
Query: 61 KSGDSRVGLVGFPSVGKSTLLNKLTGTFSEVASYEFTTLTCIPGVITYRGAKIQLLDLPG 120
KSGD+RVGLVGFPSVGKSTLLNKLTGTFSEVASYEFTTLTCIPGVITYRGAKIQLLDLPG
Sbjct: 61 KSGDARVGLVGFPSVGKSTLLNKLTGTFSEVASYEFTTLTCIPGVITYRGAKIQLLDLPG 120
Query: 121 IIEGAKDGKGRGRQVISTARTCNCILIVLDAIKPITHKRLIEKELEGFGIRLNKEPPNLT 180
IIEGAKDGKGRGRQVISTARTCNCILIVLDAIKPITHKRLIEKELEGFGIRLNKEPPNLT
Sbjct: 121 IIEGAKDGKGRGRQVISTARTCNCILIVLDAIKPITHKRLIEKELEGFGIRLNKEPPNLT 180
Query: 181 FRKKEKGGINFTSTAANTNLDLDTVKAICSEYKIHNADITLRYDATADDLIDVIEGSRVY 240
FR+KEKGGINFTSTA NT+LDLDTVKAICSEY+IHNADITLRYDATADDLIDVIEGSRVY
Sbjct: 181 FRRKEKGGINFTSTATNTHLDLDTVKAICSEYRIHNADITLRYDATADDLIDVIEGSRVY 240
Query: 241 IPCIYVVNKIDQITLEELEILDKLPHYCPISAHLEWNLDGLLEKIWEYLSLTRIYTKPKG 300
PCIYVVNKIDQITLEELEILDKLPHYCP+SAHLEWNLDGLL+K+WEYL+LTRIYTKPKG
Sbjct: 241 TPCIYVVNKIDQITLEELEILDKLPHYCPVSAHLEWNLDGLLDKVWEYLNLTRIYTKPKG 300
Query: 301 MNPDYEDPVILSSKKRTVEDFCTRIHKDMLKQFKYALVWGSSAKHKPQRVGKEHELEDED 360
MNPDYEDPVILSSKK+TVEDFC RIHKDMLKQFKYALVWGSSAKHKPQRVGKEHELEDED
Sbjct: 301 MNPDYEDPVILSSKKKTVEDFCDRIHKDMLKQFKYALVWGSSAKHKPQRVGKEHELEDED 360
Query: 361 VVQIIKKV 368
VVQIIKKV
Sbjct: 361 VVQIIKKV 368
>Medtr8g020210.1 | developmentally regulated GTP-binding protein |
HC | chr8:7102535-7108906 | 20130731
Length = 399
Score = 371 bits (952), Expect = e-103, Method: Compositional matrix adjust.
Identities = 193/366 (52%), Positives = 250/366 (68%), Gaps = 3/366 (0%)
Query: 4 VMQKIKDIEDEMAKTQKNXXXXXXXXXXXXXXXXXXXXXXXPTTKXXXXXXXXFDVTKSG 63
+++KIK+IE EMA+TQKN P K F+VTK G
Sbjct: 3 IIEKIKEIEAEMARTQKNKATEYHLGQLKAKIAKLRTQLLEPP-KGSSGGGDGFEVTKFG 61
Query: 64 DSRVGLVGFPSVGKSTLLNKLTGTFSEVASYEFTTLTCIPGVITYRGAKIQLLDLPGIIE 123
RV L+GFPSVGKSTLL LTGT SE ASYEFTTLTCIPG+I Y KIQLLDLPGIIE
Sbjct: 62 HGRVSLIGFPSVGKSTLLTLLTGTHSEAASYEFTTLTCIPGIIHYNDTKIQLLDLPGIIE 121
Query: 124 GAKDGKGRGRQVISTARTCNCILIVLDAIKPITHKRLIEKELEGFGIRLNKEPPNLTFRK 183
GA +GKGRGRQVI+ A++ + +L+VLDA K H++++ KELE G+RLNK PP + F+K
Sbjct: 122 GASEGKGRGRQVIAVAKSSDIVLMVLDASKSEGHRQILTKELEAVGLRLNKRPPQIYFKK 181
Query: 184 KEKGGINFTSTAANTNLDLDTVKAICSEYKIHNADITLRYDATADDLIDVIEGSRVYIPC 243
K+ GGI+F ST T++D I EYKIHNA+I R DAT DD IDVIEG+R Y+ C
Sbjct: 182 KKTGGISFNSTMPLTHVDEKLCYQILHEYKIHNAEILFREDATVDDFIDVIEGNRKYMKC 241
Query: 244 IYVVNKIDQITLEELEILDKLPHYCPISAHLEWNLDGLLEKIWEYLSLTRIYTKPKGMNP 303
+YV NKID + +++++ L + P+ IS +L+ NLD LL ++W+ + L R+YTKP+G P
Sbjct: 242 VYVYNKIDVVGIDDVDRLSRQPNSIVISCNLKLNLDRLLARMWDEMGLVRVYTKPQGQQP 301
Query: 304 DYEDPVILSSKK--RTVEDFCTRIHKDMLKQFKYALVWGSSAKHKPQRVGKEHELEDEDV 361
D+ DPV+LS+ + +VEDFC IH+ ++K KY LVWG+SA+H PQ G H L DEDV
Sbjct: 302 DFGDPVVLSADRGGSSVEDFCNHIHRSLVKDVKYVLVWGTSARHYPQHCGLSHVLCDEDV 361
Query: 362 VQIIKK 367
VQI+KK
Sbjct: 362 VQIVKK 367
>Medtr8g020210.2 | developmentally regulated GTP-binding protein |
HC | chr8:7102535-7108906 | 20130731
Length = 399
Score = 371 bits (952), Expect = e-103, Method: Compositional matrix adjust.
Identities = 193/366 (52%), Positives = 250/366 (68%), Gaps = 3/366 (0%)
Query: 4 VMQKIKDIEDEMAKTQKNXXXXXXXXXXXXXXXXXXXXXXXPTTKXXXXXXXXFDVTKSG 63
+++KIK+IE EMA+TQKN P K F+VTK G
Sbjct: 3 IIEKIKEIEAEMARTQKNKATEYHLGQLKAKIAKLRTQLLEPP-KGSSGGGDGFEVTKFG 61
Query: 64 DSRVGLVGFPSVGKSTLLNKLTGTFSEVASYEFTTLTCIPGVITYRGAKIQLLDLPGIIE 123
RV L+GFPSVGKSTLL LTGT SE ASYEFTTLTCIPG+I Y KIQLLDLPGIIE
Sbjct: 62 HGRVSLIGFPSVGKSTLLTLLTGTHSEAASYEFTTLTCIPGIIHYNDTKIQLLDLPGIIE 121
Query: 124 GAKDGKGRGRQVISTARTCNCILIVLDAIKPITHKRLIEKELEGFGIRLNKEPPNLTFRK 183
GA +GKGRGRQVI+ A++ + +L+VLDA K H++++ KELE G+RLNK PP + F+K
Sbjct: 122 GASEGKGRGRQVIAVAKSSDIVLMVLDASKSEGHRQILTKELEAVGLRLNKRPPQIYFKK 181
Query: 184 KEKGGINFTSTAANTNLDLDTVKAICSEYKIHNADITLRYDATADDLIDVIEGSRVYIPC 243
K+ GGI+F ST T++D I EYKIHNA+I R DAT DD IDVIEG+R Y+ C
Sbjct: 182 KKTGGISFNSTMPLTHVDEKLCYQILHEYKIHNAEILFREDATVDDFIDVIEGNRKYMKC 241
Query: 244 IYVVNKIDQITLEELEILDKLPHYCPISAHLEWNLDGLLEKIWEYLSLTRIYTKPKGMNP 303
+YV NKID + +++++ L + P+ IS +L+ NLD LL ++W+ + L R+YTKP+G P
Sbjct: 242 VYVYNKIDVVGIDDVDRLSRQPNSIVISCNLKLNLDRLLARMWDEMGLVRVYTKPQGQQP 301
Query: 304 DYEDPVILSSKK--RTVEDFCTRIHKDMLKQFKYALVWGSSAKHKPQRVGKEHELEDEDV 361
D+ DPV+LS+ + +VEDFC IH+ ++K KY LVWG+SA+H PQ G H L DEDV
Sbjct: 302 DFGDPVVLSADRGGSSVEDFCNHIHRSLVKDVKYVLVWGTSARHYPQHCGLSHVLCDEDV 361
Query: 362 VQIIKK 367
VQI+KK
Sbjct: 362 VQIVKK 367
>Medtr2g019790.1 | Obg family GTPase CgtA | HC |
chr2:6528744-6523643 | 20130731
Length = 617
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 55/89 (61%), Gaps = 1/89 (1%)
Query: 67 VGLVGFPSVGKSTLLNKLTGTFSEVASYEFTTLTCIPGVITY-RGAKIQLLDLPGIIEGA 125
VG+VG P+ GKSTLL+ ++ EVA+Y FTTL GV+++ + + + DLPG++EGA
Sbjct: 321 VGIVGAPNAGKSTLLSVVSAAKPEVANYPFTTLLPNLGVVSFDYDSTMVVADLPGLLEGA 380
Query: 126 KDGKGRGRQVISTARTCNCILIVLDAIKP 154
G G G + + C+ ++ V+D P
Sbjct: 381 HRGFGLGHEFLRHTERCSALIHVVDGSSP 409
>Medtr2g019790.2 | Obg family GTPase CgtA | HC |
chr2:6528707-6523643 | 20130731
Length = 617
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 55/89 (61%), Gaps = 1/89 (1%)
Query: 67 VGLVGFPSVGKSTLLNKLTGTFSEVASYEFTTLTCIPGVITY-RGAKIQLLDLPGIIEGA 125
VG+VG P+ GKSTLL+ ++ EVA+Y FTTL GV+++ + + + DLPG++EGA
Sbjct: 321 VGIVGAPNAGKSTLLSVVSAAKPEVANYPFTTLLPNLGVVSFDYDSTMVVADLPGLLEGA 380
Query: 126 KDGKGRGRQVISTARTCNCILIVLDAIKP 154
G G G + + C+ ++ V+D P
Sbjct: 381 HRGFGLGHEFLRHTERCSALIHVVDGSSP 409
>Medtr1g023160.1 | GTP-binding protein Obg2, putative | HC |
chr1:7356764-7361982 | 20130731
Length = 496
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 60/114 (52%), Gaps = 14/114 (12%)
Query: 67 VGLVGFPSVGKSTLLNKLTGTFSEVASYEFTTLTCIPGVITYRG----------AKIQLL 116
VGL+G P+ GKSTLL +T ++A Y FTTL +P + G ++ L
Sbjct: 272 VGLIGLPNAGKSTLLAAITLAKPDIADYPFTTL--MPNLGRLDGDPNLGAGMYSSEATLA 329
Query: 117 DLPGIIEGAKDGKGRGRQVISTARTCNCILIVLDAI--KPITHKRLIEKELEGF 168
DLPG+IEGA GKG GR + R ++ V+DA P+ R + +EL +
Sbjct: 330 DLPGLIEGAHLGKGLGRNFLRHLRRTRLLVHVVDASTENPVNDYRTVREELRMY 383
>Medtr1g073010.1 | Obg family GTPase CgtA | HC |
chr1:32424577-32421281 | 20130731
Length = 512
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 45/95 (47%)
Query: 67 VGLVGFPSVGKSTLLNKLTGTFSEVASYEFTTLTCIPGVITYRGAKIQLLDLPGIIEGAK 126
V VG P+ GKSTLL ++ V Y FTTL G + Y I + D+PG+I+GA
Sbjct: 327 VSFVGMPNAGKSTLLGAISRAKPAVGHYAFTTLRPNLGNLNYDDMSIIVADIPGLIKGAH 386
Query: 127 DGKGRGRQVISTARTCNCILIVLDAIKPITHKRLI 161
+G G + + V+D + ++ I
Sbjct: 387 QNRGLGHAFLRHIERTKVLAYVVDVAAALPGRKGI 421
>Medtr2g078050.2 | nucleolar GTP-binding-like protein | HC |
chr2:32395288-32398450 | 20130731
Length = 537
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 35/55 (63%)
Query: 69 LVGFPSVGKSTLLNKLTGTFSEVASYEFTTLTCIPGVITYRGAKIQLLDLPGIIE 123
+ G+P+VGKS+ +NK+T EV Y FTT + G Y+ + Q++D PGI++
Sbjct: 37 ICGYPNVGKSSFINKITRADVEVQPYAFTTKSLFVGHTDYKYLRYQVIDTPGILD 91
>Medtr8g018150.1 | nucleolar GTP-binding-like protein | HC |
chr8:6128625-6132452 | 20130731
Length = 673
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 35/55 (63%)
Query: 69 LVGFPSVGKSTLLNKLTGTFSEVASYEFTTLTCIPGVITYRGAKIQLLDLPGIIE 123
+ G+P+VGKS+ +NK+T EV Y FTT + G Y+ + Q++D PGI++
Sbjct: 173 ICGYPNVGKSSFINKITRADVEVQPYAFTTKSLFVGHTDYKYLRYQVIDTPGILD 227
>Medtr2g078050.1 | nucleolar GTP-binding-like protein | HC |
chr2:32395710-32397743 | 20130731
Length = 650
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 35/55 (63%)
Query: 69 LVGFPSVGKSTLLNKLTGTFSEVASYEFTTLTCIPGVITYRGAKIQLLDLPGIIE 123
+ G+P+VGKS+ +NK+T EV Y FTT + G Y+ + Q++D PGI++
Sbjct: 150 ICGYPNVGKSSFINKITRADVEVQPYAFTTKSLFVGHTDYKYLRYQVIDTPGILD 204