Miyakogusa Predicted Gene

Lj1g3v1182040.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1182040.2 tr|C1N1M4|C1N1M4_MICPC Predicted protein
OS=Micromonas pusilla (strain CCMP1545)
GN=MICPUCDRAFT_3545,30.59,5e-19,TRM,tRNA
(guanine(26)-N(2))-dimethyltransferase; N(2),N(2)-DIMETHYLGUANOSINE
TRNA METHYLTRANSFERASE,,CUFF.26925.2
         (218 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g094190.1 | N(2),N(2)-dimethylguanosine tRNA methyltransfe...   355   3e-98
Medtr6g015885.2 | N(2),N(2)-dimethylguanosine tRNA methyltransfe...    48   7e-06
Medtr6g015885.1 | N(2),N(2)-dimethylguanosine tRNA methyltransfe...    48   8e-06

>Medtr3g094190.1 | N(2),N(2)-dimethylguanosine tRNA
           methyltransferase | HC | chr3:43047644-43043907 |
           20130731
          Length = 417

 Score =  355 bits (910), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 172/206 (83%), Positives = 190/206 (92%)

Query: 12  VTVLISGAVREAAVLGYHITPLYSYYAYHGPVFRVLLRLNRGKIHDSRHYGYIGFCHKCG 71
           + +LI G VREAA+LGYHITPL+SYYAYHGPVFRVLLRLNR K+HDSRHYG+IG C +CG
Sbjct: 212 LRMLIGGVVREAALLGYHITPLFSYYAYHGPVFRVLLRLNRRKLHDSRHYGFIGQCDQCG 271

Query: 72  NSHEFSWDQLGQFSCSCSMPQVSNSLVVSGPLWTGPLHDAAYLTDMLNLAKQWGWIGCDG 131
           NSHEFSWDQLGQ SCSCS+ +VS+SL VSGPLWTGPLHDAAYLTDML+LAKQWGWIGCDG
Sbjct: 272 NSHEFSWDQLGQMSCSCSVSKVSDSLKVSGPLWTGPLHDAAYLTDMLDLAKQWGWIGCDG 331

Query: 132 KDSLEKLINVMVDESDPKLPFGYIKLDEMASRAKINSPPLKTLMSAIQQKGYAASRSHIK 191
           KDSLEKLI +MVDESDP+LPFGYIKLDEMASRAKINSPPL+ LMSA+ +KGYAASRSHI 
Sbjct: 332 KDSLEKLIKLMVDESDPRLPFGYIKLDEMASRAKINSPPLRALMSAMHEKGYAASRSHIT 391

Query: 192 TNAIKTNCPMTECISIAKELLQVSVS 217
            NAIKTNCPMTE ISIAKEL+ +SVS
Sbjct: 392 ANAIKTNCPMTEFISIAKELVLISVS 417


>Medtr6g015885.2 | N(2),N(2)-dimethylguanosine tRNA
           methyltransferase, putative | HC | chr6:5560917-5567018
           | 20130731
          Length = 640

 Score = 48.1 bits (113), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 26/106 (24%), Positives = 53/106 (50%), Gaps = 3/106 (2%)

Query: 97  LVVSGPLWTGPLHDAAYLTDMLNLAKQWGWIGCDGKDSLEKLINVMVDESDPKLPFGYIK 156
            ++ GP+W+ P+HD  ++  ++    +         + +  ++N + +E  P +P  ++ 
Sbjct: 435 FIMGGPIWSAPIHDQEWVASIIEDVNRMKS-SYPAYEHISAILNTISEEL-PDVPL-FLS 491

Query: 157 LDEMASRAKINSPPLKTLMSAIQQKGYAASRSHIKTNAIKTNCPMT 202
           L  ++S  K  SP      SA+   GY  SR+H+    +KT+ PM+
Sbjct: 492 LHNLSSTLKCTSPSAVIFRSAVINAGYRISRTHVCAIGLKTDAPMS 537


>Medtr6g015885.1 | N(2),N(2)-dimethylguanosine tRNA
           methyltransferase, putative | HC | chr6:5560947-5566965
           | 20130731
          Length = 595

 Score = 47.8 bits (112), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 26/106 (24%), Positives = 53/106 (50%), Gaps = 3/106 (2%)

Query: 97  LVVSGPLWTGPLHDAAYLTDMLNLAKQWGWIGCDGKDSLEKLINVMVDESDPKLPFGYIK 156
            ++ GP+W+ P+HD  ++  ++    +         + +  ++N + +E  P +P  ++ 
Sbjct: 377 FIMGGPIWSAPIHDQEWVASIIEDVNRMKS-SYPAYEHISAILNTISEEL-PDVPL-FLS 433

Query: 157 LDEMASRAKINSPPLKTLMSAIQQKGYAASRSHIKTNAIKTNCPMT 202
           L  ++S  K  SP      SA+   GY  SR+H+    +KT+ PM+
Sbjct: 434 LHNLSSTLKCTSPSAVIFRSAVINAGYRISRTHVCAIGLKTDAPMS 479