Miyakogusa Predicted Gene

Lj1g3v1180830.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1180830.1 Non Characterized Hit- tr|F4YFH3|F4YFH3_CAMSI
Putative uncharacterized protein (Fragment)
OS=Camelli,52.94,0.0000000000002,seg,NULL,CUFF.26906.1
         (179 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g094080.1 | hypothetical protein | HC | chr3:42983526-4298...   219   9e-58

>Medtr3g094080.1 | hypothetical protein | HC |
           chr3:42983526-42982384 | 20130731
          Length = 171

 Score =  219 bits (559), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 114/171 (66%), Positives = 123/171 (71%), Gaps = 2/171 (1%)

Query: 9   MGLGTLPLTPSY-RSFPSNSGLVQSTNHSMVNRSIKFSVSAXXXXXXXXXXXXXSLFSSV 67
           MGLGTLPLTP Y  SF S S  +   N +  NRS KF VSA             S F+SV
Sbjct: 1   MGLGTLPLTPPYYTSFSSKSSGLVHKNTNNCNRSKKFIVSAKQEKKEEDKDKQ-SFFTSV 59

Query: 68  TEALDFSQVRSAEDAQLIDEAREATTSGERMSREQYGALRRKIGGTYKDFFKSYVEVDGA 127
           T+ALDF+Q RSA+DAQLI EAREAT SGE+MSREQYGALRRKIGGTYKDFFKSYVEVDG 
Sbjct: 60  TDALDFAQPRSAQDAQLIQEAREATKSGEQMSREQYGALRRKIGGTYKDFFKSYVEVDGE 119

Query: 128 YVEEGWXXXXXXXXXXXXXGEARQVDNLGRYVHVACLEKSKTGNFFTRLFS 178
           YVEEGW             GEARQVD LGRYVHVAC EK+K+GNFFTRLFS
Sbjct: 120 YVEEGWVDKTCKVCKKDTKGEARQVDKLGRYVHVACAEKAKSGNFFTRLFS 170