Miyakogusa Predicted Gene

Lj1g3v1180820.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1180820.1 Non Characterized Hit- tr|I1JYB4|I1JYB4_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.25682
PE,68.4,0,seg,NULL; SUBFAMILY NOT NAMED,NULL;
UNCHARACTERIZED,Mini-chromosome maintenance complex-binding
prot,CUFF.26922.1
         (505 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g094070.1 | mini-chromosome maintenance complex-binding pr...   636   0.0  

>Medtr3g094070.1 | mini-chromosome maintenance complex-binding
           protein | HC | chr3:42980519-42975717 | 20130731
          Length = 592

 Score =  636 bits (1640), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 338/503 (67%), Positives = 388/503 (77%), Gaps = 13/503 (2%)

Query: 1   MFGNECYIGAYKDGSAWRTNKFMDFS--PVPMASPSPDTLIWERRVHYCIPIPGLNPWAE 58
           M GNE Y+GA+KDGS WRTNKF DF    +P+   S DT IWERR+ YC+P+PGLN WAE
Sbjct: 83  MLGNEFYVGAFKDGSVWRTNKFTDFCQHSIPVGC-SADTPIWERRLLYCVPVPGLNSWAE 141

Query: 59  -----VGNDSMDWTSEQRVKRRRPEDDSP-DMPVSCDNDQGSPSTKKMREGEDSSLTTKS 112
                VGN SMDWTSEQR KRRR +++SP +MPV  D  +GSP+TK+MREGE +S  ++S
Sbjct: 142 PSAEAVGNPSMDWTSEQREKRRRGDEESPSNMPVEGDEVEGSPNTKRMREGECTSPASQS 201

Query: 113 QRASLEIAVSSTSLMSGLDSNSPACIVKIYDTPDSELNLNDIFEFVGILT-DPVLHXXXX 171
             A  EIA SS SL+ GL+ NS +CIVK+YDTP+SEL LNDIFEFVGILT DP L     
Sbjct: 202 HGAVPEIAGSSMSLLPGLNGNSSSCIVKVYDTPESELKLNDIFEFVGILTSDPELQEDNE 261

Query: 172 XXXXXXXXXXXXXCAEFMHPKVPRLHCLIHRKLAVQDFIQNNPILEPKPDLVKGIRETFS 231
                           F   KVPRLHC IHRKL+VQDF+QN PI+EPKPDLVKGIRE+  
Sbjct: 262 DSDLSNGFGEDP-LHHFPADKVPRLHCFIHRKLSVQDFLQNKPIIEPKPDLVKGIRESLL 320

Query: 232 RHLSSVLGNDDVAAHFVLLHLFSKVHARVDDHFPVGNLSVNLTSFSKETASIFGSQLTLV 291
           RHLS+VLGND+VAAHF+LLHL SKV ARVD    VG  SVN T FSKETASI G QL   
Sbjct: 321 RHLSAVLGNDEVAAHFMLLHLLSKVEARVD-ALAVGKFSVNFTCFSKETASI-GKQLNHA 378

Query: 292 VKNLLPFTHSIPLTVEYLNTASLVPTKNYETDRLETAVLQMAESSHLIVDETKLEAGSLN 351
           VKNL+PFTH +PLTV+YLNTASL P KNY+T+RLET VLQ+AE SHLIVDET+L+AG+LN
Sbjct: 379 VKNLVPFTHCMPLTVQYLNTASLAPKKNYDTNRLETGVLQLAEGSHLIVDETQLKAGTLN 438

Query: 352 SVGVENVRLLGDLVELQKVDYNFMYCTMPIETDVQVLVLSEGKSNILPADVIVPFQPSAT 411
           SVGVEN RLL +++ELQKV+Y+F Y  M + TDVQ+LVLSEGKSNILPADVIVP +PSAT
Sbjct: 439 SVGVENARLLKNVMELQKVEYDFKYYKMEMATDVQLLVLSEGKSNILPADVIVPIRPSAT 498

Query: 412 NCSEAVAAETLEAWRWYLATVRQLPHSIGSEVQKVVENDFVEARQTDRSLTPQDFSRLLT 471
            C EAVAAE LEAWRWYLATVRQLPHS  SE Q+VVE+D V A Q DRSL  QD SRL+T
Sbjct: 499 ICLEAVAAEALEAWRWYLATVRQLPHSFESETQQVVESDLVAAIQADRSLNTQDLSRLVT 558

Query: 472 MGRLMSKSFGETSLSLEHWQMVK 494
           MGRLM  SFGET+LSLEHWQM K
Sbjct: 559 MGRLMCLSFGETTLSLEHWQMTK 581