Miyakogusa Predicted Gene
- Lj1g3v1135190.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v1135190.1 tr|G7JXT8|G7JXT8_MEDTR Polygalacturonase
OS=Medicago truncatula GN=MTR_5g043350 PE=3 SV=1,60.1,0,Pectin
lyase-like,Pectin lyase fold/virulence factor; no description,Pectin
lyase fold; SUBFAMILY NO,CUFF.26860.1
(212 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr5g043350.1 | polygalacturonase/glycoside hydrolase family p... 256 1e-68
Medtr3g084360.1 | polygalacturonase/glycoside hydrolase family p... 236 2e-62
Medtr6g028080.1 | polygalacturonase | HC | chr6:9978081-9985497 ... 227 8e-60
Medtr4g084050.1 | polygalacturonase | LC | chr4:32729268-3273117... 225 2e-59
Medtr3g084380.1 | polygalacturonase/glycoside hydrolase family p... 221 4e-58
Medtr3g054320.1 | polygalacturonase/glycoside hydrolase family p... 214 3e-56
Medtr2g103650.1 | polygalacturonase/glycoside hydrolase family p... 166 2e-41
Medtr8g010050.1 | pectin lyase superfamily protein | LC | chr8:2... 164 4e-41
Medtr0157s0060.1 | polygalacturonase/glycoside hydrolase family ... 162 2e-40
Medtr4g034020.1 | polygalacturonase/glycoside hydrolase family p... 162 2e-40
Medtr1g012390.1 | polygalacturonase | HC | chr1:2451099-2447667 ... 162 2e-40
Medtr8g010070.1 | polygalacturonase | LC | chr8:2539644-2543850 ... 162 3e-40
Medtr8g008765.1 | polygalacturonase | LC | chr8:1861927-1866353 ... 151 5e-37
Medtr1g013740.1 | polygalacturonase | HC | chr1:3276100-3272148 ... 149 1e-36
Medtr8g010080.1 | polygalacturonase | LC | chr8:2548763-2551323 ... 145 2e-35
Medtr8g010090.1 | polygalacturonase/glycoside hydrolase family p... 142 2e-34
Medtr8g010110.1 | polygalacturonase | LC | chr8:2562133-2566759 ... 141 5e-34
Medtr8g010040.1 | polygalacturonase | LC | chr8:2522127-2526378 ... 140 9e-34
Medtr2g103410.2 | polygalacturonase | HC | chr2:44519609-4452318... 138 3e-33
Medtr2g103410.1 | polygalacturonase | HC | chr2:44519609-4452318... 138 3e-33
Medtr7g035415.1 | polygalacturonase | LC | chr7:13555483-1355938... 138 4e-33
Medtr1g013730.1 | polygalacturonase/glycoside hydrolase family p... 136 1e-32
Medtr6g005630.2 | polygalacturonase | HC | chr6:863153-867302 | ... 135 2e-32
Medtr7g091840.1 | endo polygalacturonase | HC | chr7:36349369-36... 135 3e-32
Medtr6g005630.1 | polygalacturonase | HC | chr6:863153-867302 | ... 135 3e-32
Medtr7g091850.1 | endo polygalacturonase | HC | chr7:36360735-36... 132 2e-31
Medtr8g077320.1 | pectin lyase superfamily protein | LC | chr8:3... 129 1e-30
Medtr1g052315.1 | endo polygalacturonase | HC | chr1:21186740-21... 129 2e-30
Medtr5g033680.1 | polygalacturonase | HC | chr5:14519678-1451629... 126 2e-29
Medtr3g438050.1 | polygalacturonase/glycoside hydrolase family p... 125 3e-29
Medtr8g065030.1 | pectin lyase superfamily protein | HC | chr8:2... 122 2e-28
Medtr2g060350.1 | polygalacturonase | HC | chr2:24855141-2485865... 120 7e-28
Medtr5g034090.1 | polygalacturonase | HC | chr5:14734905-1473941... 120 9e-28
Medtr5g034090.2 | polygalacturonase | HC | chr5:14734905-1473875... 120 1e-27
Medtr8g065010.1 | polygalacturonase plant-like protein | HC | ch... 119 2e-27
Medtr2g049400.1 | pectin lyase superfamily protein | LC | chr2:2... 119 2e-27
Medtr5g063430.1 | polygalacturonase/glycoside hydrolase family p... 119 3e-27
Medtr1g086390.1 | polygalacturonase/glycoside hydrolase family p... 118 3e-27
Medtr3g030540.1 | polygalacturonase | LC | chr3:9670728-9674889 ... 117 9e-27
Medtr4g083660.1 | polygalacturonase | HC | chr4:32524282-3252202... 117 1e-26
Medtr4g120320.1 | polygalacturonase | HC | chr4:49884372-4988630... 115 4e-26
Medtr7g110050.1 | polygalacturonase/glycoside hydrolase family p... 114 6e-26
Medtr8g030930.1 | polygalacturonase/glycoside hydrolase family p... 111 5e-25
Medtr4g094715.1 | pectin lyase superfamily protein | HC | chr4:3... 110 1e-24
Medtr1g088160.1 | polygalacturonase | HC | chr1:39392282-3939047... 106 2e-23
Medtr2g435640.1 | polygalacturonase | HC | chr2:13796366-1379143... 105 4e-23
Medtr8g009810.1 | pectin lyase superfamily protein | HC | chr8:2... 103 1e-22
Medtr2g032710.2 | polygalacturonase plant-like protein | HC | ch... 92 3e-19
Medtr2g032710.1 | polygalacturonase plant-like protein | HC | ch... 92 3e-19
Medtr8g008700.1 | polygalacturonase | LC | chr8:1829561-1832039 ... 87 2e-17
Medtr2g058670.1 | polygalacturonase 11c, putative | HC | chr2:24... 77 2e-14
Medtr2g058840.1 | polygalacturonase 11c, putative | HC | chr2:24... 77 2e-14
Medtr2g058640.1 | polygalacturonase 11c, putative | HC | chr2:24... 76 2e-14
Medtr7g113910.1 | polygalacturonase | HC | chr7:46964803-4695913... 75 5e-14
Medtr2g029170.1 | endo-polygalacturonase | HC | chr2:10881421-10... 75 5e-14
Medtr5g090160.1 | polygalacturonase/glycoside hydrolase family p... 72 5e-13
Medtr1g099850.1 | pectin lyase superfamily protein | HC | chr1:4... 71 7e-13
Medtr3g449590.1 | polygalacturonase/glycoside hydrolase family p... 69 3e-12
Medtr1g100060.1 | pectin lyase superfamily protein | HC | chr1:4... 68 6e-12
Medtr5g097860.1 | polygalacturonase | HC | chr5:42842979-4284475... 68 6e-12
Medtr1g100050.1 | pectin lyase superfamily protein | HC | chr1:4... 66 2e-11
Medtr7g088550.1 | pectin lyase superfamily protein | HC | chr7:3... 65 6e-11
Medtr1g100040.1 | pectin lyase superfamily protein | HC | chr1:4... 64 7e-11
Medtr2g100040.1 | polygalacturonase | LC | chr2:42942787-4294449... 64 1e-10
Medtr7g078680.1 | polygalacturonase/glycoside hydrolase family p... 63 2e-10
Medtr8g028725.1 | polygalacturonase/glycoside hydrolase family p... 60 1e-09
Medtr8g098840.1 | polygalacturonase/glycoside hydrolase family p... 59 2e-09
Medtr1g086030.1 | polygalacturonase/glycoside hydrolase family p... 59 4e-09
Medtr4g120730.1 | polygalacturonase/glycoside hydrolase family p... 59 4e-09
Medtr3g096330.1 | glycoside hydrolase family 28 protein | HC | c... 58 7e-09
Medtr1g086030.2 | polygalacturonase/glycoside hydrolase family p... 56 3e-08
Medtr7g110710.1 | polygalacturonase/glycoside hydrolase family p... 55 5e-08
Medtr7g110710.2 | polygalacturonase/glycoside hydrolase family p... 55 5e-08
Medtr8g031180.1 | polygalacturonase | LC | chr8:11659557-1165736... 49 3e-06
Medtr2g435340.1 | polygalacturonase/glycoside hydrolase family p... 49 4e-06
>Medtr5g043350.1 | polygalacturonase/glycoside hydrolase family
protein | LC | chr5:19058555-19056081 | 20130731
Length = 400
Score = 256 bits (654), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 117/208 (56%), Positives = 152/208 (73%), Gaps = 2/208 (0%)
Query: 5 LYARVTPNAGSSNFNIVNYGAKGDGQTDNSQAFVKAWNDMCAATQGAPTLLIPKGKSFML 64
L R+TP+ GS NFN++ YGA GDG TD+S AFVKAWND+C TQG PTL+IP+GK+FML
Sbjct: 17 LCGRITPDDGS-NFNVLTYGANGDGNTDDSNAFVKAWNDVCGTTQGTPTLIIPEGKTFML 75
Query: 65 QPVSFKGPCKSNNVNIELQGTLVAPKSVVAWKWANNNKGAWIDFSGINGLVIRGGGTFDG 124
QP+SF+GPCKS + +E++GT+ APK + AWKW +N + +W+ FS INGL + G GT DG
Sbjct: 76 QPLSFQGPCKSTTIQVEVKGTITAPKDIEAWKWKDNKRRSWVQFSKINGLAVYGEGTIDG 135
Query: 125 QGATWWAKYSD-DSDRPSALRFHSCKNLALSATNHINSPRNHXXXXXXXXXXXXXXHVTA 183
QGA WW KY D DS+RP+A +F C++L +S NHINSPRNH + A
Sbjct: 136 QGAPWWKKYHDGDSNRPTAFQFIGCESLTISNLNHINSPRNHISIDSCKNASISNLQIIA 195
Query: 184 PEESPNTDGIDISGSTNILIKDSTIRTG 211
PE SPNTDGIDI+ S+NI+I + +I+TG
Sbjct: 196 PENSPNTDGIDIASSSNIIINNLSIKTG 223
>Medtr3g084360.1 | polygalacturonase/glycoside hydrolase family
protein | LC | chr3:38089185-38091032 | 20130731
Length = 391
Score = 236 bits (601), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 111/195 (56%), Positives = 138/195 (70%), Gaps = 1/195 (0%)
Query: 17 NFNIVNYGAKGDGQTDNSQAFVKAWNDMCAATQGAPTLLIPKGKSFMLQPVSFKGPCKSN 76
+FN+VNYGAKGD TD+S AF+KAW ++C +TQG PTL+IP GK FMLQP SF+GPCKS+
Sbjct: 23 SFNVVNYGAKGDSNTDDSNAFLKAWQEVCGSTQGTPTLIIPGGKKFMLQPSSFQGPCKSS 82
Query: 77 NVNIELQGTLVAPKSVVAWKWANNNKGAWIDFSGINGLVIRGGGTFDGQGATWWAKYSDD 136
V + + GT++AP+S WKW + + AWI FS I GL+I G GTFDGQGA+WW Y +D
Sbjct: 83 TVKVMMMGTIIAPQSSGKWKWDSRDDDAWISFSHIKGLIISGEGTFDGQGASWWKNY-ND 141
Query: 137 SDRPSALRFHSCKNLALSATNHINSPRNHXXXXXXXXXXXXXXHVTAPEESPNTDGIDIS 196
RP+AL+F C NL L HI+SP+NH H+ APE SPNTDGIDIS
Sbjct: 142 HGRPTALQFLGCDNLKLGPLRHIDSPKNHISIVDCNGALISHLHIIAPENSPNTDGIDIS 201
Query: 197 GSTNILIKDSTIRTG 211
STNI+I+ STI TG
Sbjct: 202 RSTNIIIEHSTISTG 216
>Medtr6g028080.1 | polygalacturonase | HC | chr6:9978081-9985497 |
20130731
Length = 400
Score = 227 bits (578), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 104/198 (52%), Positives = 142/198 (71%), Gaps = 4/198 (2%)
Query: 18 FNIVNYGAKGDGQTDNSQAFVKAWNDMCAATQGAPTLLIPKGKSFMLQPVSFKGPCKSNN 77
FN+++YGA G+G+ D ++AFV AW D C A + TLLIPKGK+FMLQPV F+GPC S+N
Sbjct: 30 FNVLDYGAVGNGKNDETRAFVDAWKDTCIAMHESSTLLIPKGKTFMLQPVWFQGPCNSSN 89
Query: 78 VNIELQGTLVAPKSVVAWKWANNN-KGAWIDFSGINGLVIRGGGTFDGQGATWWAKYSD- 135
+ ++L+GT++APK++ AWKW N+N KG+WI F I+GL++ GGG DG+GA WW +S+
Sbjct: 90 IYVKLEGTIIAPKNIEAWKWPNDNYKGSWIRFIEISGLIVYGGGIIDGKGAQWWDCHSNI 149
Query: 136 --DSDRPSALRFHSCKNLALSATNHINSPRNHXXXXXXXXXXXXXXHVTAPEESPNTDGI 193
+ + P+AL FH+C+NL L HINSPRNH H+ AP ESPNTDGI
Sbjct: 150 KCEKENPTALHFHACENLILRELTHINSPRNHISLNACHGSHISKLHIIAPNESPNTDGI 209
Query: 194 DISGSTNILIKDSTIRTG 211
DI+ S+NI+I++S I TG
Sbjct: 210 DIAESSNIIIENSKIETG 227
>Medtr4g084050.1 | polygalacturonase | LC | chr4:32729268-32731175 |
20130731
Length = 394
Score = 225 bits (574), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 105/211 (49%), Positives = 142/211 (67%), Gaps = 2/211 (0%)
Query: 1 MLLILYARVTPNAGSSNFNIVNYGAKGDGQTDNSQAFVKAWNDMCAATQGAPTLLIPKGK 60
+L +++ +P + FN+V YGAKGDG TD+S AF AW D+C +T+ PTL+IP+G+
Sbjct: 6 VLCLIFVIASPCLCQNYFNVVKYGAKGDGHTDDSNAFTNAWQDVCGSTRDTPTLIIPEGQ 65
Query: 61 SFMLQPVSFKGPCKSNNVNIELQGTLVAPKSVVAWKWANNNKGAWIDFSGINGLVIRGGG 120
+FMLQP+SF+GPCKS +++++ GT+ AP+S WKW +N+ WI FS INGL+I GGG
Sbjct: 66 NFMLQPLSFQGPCKSTTISVKIMGTITAPQSNANWKWDDNDGDYWIKFSNINGLIINGGG 125
Query: 121 TFDGQGATWWAKYSDDSDRPSALRFHSCKNLALSATNHINSPRNHXXXXXXXXXXXXXXH 180
T DGQG +WW ++ RP+AL+ C NL L HINSPRNH H
Sbjct: 126 TVDGQGDSWWN--NNGHIRPTALKILECDNLKLGPLKHINSPRNHISIVGCNDALISNLH 183
Query: 181 VTAPEESPNTDGIDISGSTNILIKDSTIRTG 211
+ AP++SPNTDGIDIS STNI ++ S I TG
Sbjct: 184 IIAPKDSPNTDGIDISTSTNISVQHSIISTG 214
>Medtr3g084380.1 | polygalacturonase/glycoside hydrolase family
protein | LC | chr3:38095209-38097944 | 20130731
Length = 396
Score = 221 bits (563), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 108/219 (49%), Positives = 146/219 (66%), Gaps = 9/219 (4%)
Query: 1 MLLI----LYARVTPNAGSSNFNIVNYGAKGDGQTDNSQAFVKAWNDMCAATQGAPTLLI 56
ML+I + +R+TPN GS+ F+++ YGA GDGQTD+S AF+K +ND C ++ P++ I
Sbjct: 1 MLVIASHSVSSRITPNTGST-FDVLTYGAIGDGQTDDSNAFLKVFNDACGTSESTPSMTI 59
Query: 57 PKGKSFMLQPVSFKGPCKSNNVNIELQGTLVAPKSVVAWKW-ANNNKGAWIDFSGINGLV 115
P+GK+F+LQP+ FKGPCKS N+ +EL+G + APK + +W + + WI FS I+GLV
Sbjct: 60 PEGKTFLLQPLVFKGPCKSTNIIVELKGNITAPKDIESWNFTVEKQRKIWIQFSKISGLV 119
Query: 116 IRGGGTFDGQGATWWAKY---SDDSDRPSALRFHSCKNLALSATNHINSPRNHXXXXXXX 172
+ G G DGQG+ WW K+ + RP+ALRF C+ L LS NH+NSP+NH
Sbjct: 120 VNGEGNIDGQGSPWWDKFGGKGQEKFRPTALRFLDCQALTLSNLNHMNSPKNHISVDSCK 179
Query: 173 XXXXXXXHVTAPEESPNTDGIDISGSTNILIKDSTIRTG 211
H+TAP SPNTDGIDIS STNI I +STI TG
Sbjct: 180 NASIFNIHITAPPTSPNTDGIDISQSTNIAIMNSTIETG 218
>Medtr3g054320.1 | polygalacturonase/glycoside hydrolase family
protein | LC | chr3:21549576-21552288 | 20130731
Length = 401
Score = 214 bits (546), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 99/207 (47%), Positives = 137/207 (66%)
Query: 5 LYARVTPNAGSSNFNIVNYGAKGDGQTDNSQAFVKAWNDMCAATQGAPTLLIPKGKSFML 64
LYA + +S F+++ YGA GDGQTD+S AF+KA++D+C +G T+ IP GK+F+L
Sbjct: 17 LYATTITSNTNSTFDVLTYGAIGDGQTDDSNAFLKAFHDVCGTIEGTRTMTIPNGKTFLL 76
Query: 65 QPVSFKGPCKSNNVNIELQGTLVAPKSVVAWKWANNNKGAWIDFSGINGLVIRGGGTFDG 124
QP+SF GPCK + IE++G++ APK V WK++++ K WI FS IN L++ G G DG
Sbjct: 77 QPLSFNGPCKPGTITIEIKGSITAPKDVKLWKFSSDRKNVWIRFSEINDLIVNGKGDIDG 136
Query: 125 QGATWWAKYSDDSDRPSALRFHSCKNLALSATNHINSPRNHXXXXXXXXXXXXXXHVTAP 184
QG++WW +Y D DRP+AL+F C++L L+ H NSPRNH H+ A
Sbjct: 137 QGSSWWLRYPGDQDRPTALQFLGCQDLKLNDLTHRNSPRNHISIDTCKGAFISNLHIIAA 196
Query: 185 EESPNTDGIDISGSTNILIKDSTIRTG 211
SPNTDGIDIS S+N+ I +S I TG
Sbjct: 197 PTSPNTDGIDISQSSNVFITNSFIGTG 223
>Medtr2g103650.1 | polygalacturonase/glycoside hydrolase family
protein | HC | chr2:44629212-44625414 | 20130731
Length = 404
Score = 166 bits (420), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 85/218 (38%), Positives = 125/218 (57%), Gaps = 9/218 (4%)
Query: 1 MLLILYARVTPNAGSSNFNIVNYGAKGDGQTDNSQAFVKAWNDMCAATQGAPTLLIPKGK 60
+L+IL + ++ FN++ YGA GDG+T++S AF+KAW D+C + G L+IP K
Sbjct: 11 LLMILSMFKLGLSITTTFNVLQYGAVGDGKTNDSPAFLKAWKDVCNSKSGTSRLIIPAAK 70
Query: 61 SFMLQPVSFKGPCKSNNVNIELQGTLVAPKSVVAWKWANNNKGAWIDFSGINGLVIRGGG 120
+F+L+P++F+GPCKSN + IEL G ++APK+ + + N WI FS +NGL+I G G
Sbjct: 71 TFLLRPIAFRGPCKSNYIYIELSGNIIAPKTKSEYSGSPIN--TWIGFSFVNGLIISGKG 128
Query: 121 TFDGQGATWWAKYS-------DDSDRPSALRFHSCKNLALSATNHINSPRNHXXXXXXXX 173
T DG+G+ WW + P+A+ + C + IN R+H
Sbjct: 129 TVDGRGSMWWKQPCIGNPPPGTSCRPPTAITLNRCYRFQIKGYTSINPARSHITLTSCKK 188
Query: 174 XXXXXXHVTAPEESPNTDGIDISGSTNILIKDSTIRTG 211
+ AP ESPNTDGIDIS S +I + +S I TG
Sbjct: 189 GIISNIRLIAPGESPNTDGIDISASRDIQVLNSFIATG 226
>Medtr8g010050.1 | pectin lyase superfamily protein | LC |
chr8:2530574-2534406 | 20130731
Length = 356
Score = 164 bits (416), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 90/213 (42%), Positives = 124/213 (58%), Gaps = 10/213 (4%)
Query: 1 MLLILYARVTPNAGSSNFNIVNYGAKGDGQTDNSQAFVKAWNDMCAATQGAPTLLIPKGK 60
+L L R+ ++ +N++ YGA+GDG+TD+SQAFV AW+ C A + TL+IP GK
Sbjct: 14 ILPCLSTRLNVGTKNAIYNVMQYGARGDGKTDDSQAFVSAWSSACKAAE-MSTLVIPVGK 72
Query: 61 SFMLQPVSFKGPCKSNNVNIELQGTLVAPKSVVAWKWANNNKGAWIDFSGINGLVIRGGG 120
+FM+ +SF GPC + N+ I+L+G +VAP S V WK + WI + GL I G G
Sbjct: 73 TFMVSKLSFSGPCTNKNILIQLEGKIVAP-SKVGWKA----QSYWITVQSVEGLTIEGNG 127
Query: 121 --TFDGQGATWWAKYSDDSDRPSALRFHSCKNLALSATNHINSPRNHXXXXXXXXXXXXX 178
DG G+TWW S RP FHSCK L +S + NSPR+H
Sbjct: 128 RGVLDGDGSTWWQCKS--CARPGVFLFHSCKGLNVSNLSITNSPRSHVAVNMCNGATFSN 185
Query: 179 XHVTAPEESPNTDGIDISGSTNILIKDSTIRTG 211
+ +P SPNTDG DI+ ST+I+I DS I++G
Sbjct: 186 ISINSPGTSPNTDGFDIALSTHIVIHDSNIKSG 218
>Medtr0157s0060.1 | polygalacturonase/glycoside hydrolase family
protein | LC | scaffold0157:20596-15247 | 20130731
Length = 365
Score = 162 bits (410), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 93/191 (48%), Positives = 123/191 (64%), Gaps = 8/191 (4%)
Query: 21 VNYGAKGDGQTDNSQAFVKAWNDMCAATQGAPTLLIPKGKSFMLQPVSFKGPCKSNNVNI 80
++YGA GDG TD+SQ F+K WND+C PTLL+P GK+F+L P+ F+GPC + V+
Sbjct: 1 MDYGAVGDGLTDDSQVFLKVWNDICKRDSDTPTLLVPSGKTFLLNPLKFRGPCSFSPVHF 60
Query: 81 ELQGTLVAPKSVVAWKWANNNKGAWIDFSGINGLVIRGGGTFDGQGATWWAKYSDDSDRP 140
+L+G +VAP S AWK + K WI F I+G++I GGG DGQG+TWW
Sbjct: 61 QLEGNIVAPSSSEAWKDEDYTK--WIVFYYIHGIIIDGGGQIDGQGSTWWKT------NC 112
Query: 141 SALRFHSCKNLALSATNHINSPRNHXXXXXXXXXXXXXXHVTAPEESPNTDGIDISGSTN 200
SAL +C NL L+ T+H+NS RNH ++TAP+ESPNTDGIDI S+
Sbjct: 113 SALHIDNCSNLQLNGTHHLNSARNHISIDYSDHVNIFKINITAPQESPNTDGIDIGHSSY 172
Query: 201 ILIKDSTIRTG 211
+LI+DSTI TG
Sbjct: 173 VLIQDSTIATG 183
>Medtr4g034020.1 | polygalacturonase/glycoside hydrolase family
protein | LC | chr4:12499881-12505230 | 20130731
Length = 365
Score = 162 bits (410), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 93/191 (48%), Positives = 123/191 (64%), Gaps = 8/191 (4%)
Query: 21 VNYGAKGDGQTDNSQAFVKAWNDMCAATQGAPTLLIPKGKSFMLQPVSFKGPCKSNNVNI 80
++YGA GDG TD+SQ F+K WND+C PTLL+P GK+F+L P+ F+GPC + V+
Sbjct: 1 MDYGAVGDGLTDDSQVFLKVWNDICKRDSDTPTLLVPSGKTFLLNPLKFRGPCSFSPVHF 60
Query: 81 ELQGTLVAPKSVVAWKWANNNKGAWIDFSGINGLVIRGGGTFDGQGATWWAKYSDDSDRP 140
+L+G +VAP S AWK + K WI F I+G++I GGG DGQG+TWW
Sbjct: 61 QLEGNIVAPSSSEAWKDEDYTK--WIVFYYIHGIIIDGGGQIDGQGSTWWKT------NC 112
Query: 141 SALRFHSCKNLALSATNHINSPRNHXXXXXXXXXXXXXXHVTAPEESPNTDGIDISGSTN 200
SAL +C NL L+ T+H+NS RNH ++TAP+ESPNTDGIDI S+
Sbjct: 113 SALHIDNCSNLQLNGTHHLNSARNHISIDYSDHVNIFKINITAPQESPNTDGIDIGHSSY 172
Query: 201 ILIKDSTIRTG 211
+LI+DSTI TG
Sbjct: 173 VLIQDSTIATG 183
>Medtr1g012390.1 | polygalacturonase | HC | chr1:2451099-2447667 |
20130731
Length = 397
Score = 162 bits (410), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 81/218 (37%), Positives = 129/218 (59%), Gaps = 13/218 (5%)
Query: 3 LILYARVTPNA----GSSNFNIVNYGAKGDGQTDNSQAFVKAWNDMCAATQGAPTLLIPK 58
L++++ V+ N+ + FN++ YGAKGDG +D++QAF++AW +CAA QG PTL++P
Sbjct: 9 LLIFSIVSCNSFVGFSQNTFNVLQYGAKGDGTSDDTQAFLEAWKALCAANQGTPTLVVPA 68
Query: 59 GKSFMLQPVSFKGPCKSNNVNIELQGTLVAPKSVVAWKWANNNKGAWIDFSGINGLVIRG 118
+F ++ +F+GPCKS N++I++ G ++AP W + +K W+ F ++G+ + G
Sbjct: 69 EHTFFVRQATFQGPCKSQNLHIQIMGNIIAPHRDA---WGSCSK-RWLYFLNVHGMTVDG 124
Query: 119 GGTFDGQGATWWA-----KYSDDSDRPSALRFHSCKNLALSATNHINSPRNHXXXXXXXX 173
G DG+G WW+ K + RP+AL F C L LS HIN P H
Sbjct: 125 SGVIDGRGEAWWSNLNGTKGCAANARPTALLFERCDGLQLSGLTHINGPAMHVYVVHSQD 184
Query: 174 XXXXXXHVTAPEESPNTDGIDISGSTNILIKDSTIRTG 211
++++ ++S NTDGIDIS S + I DS I++G
Sbjct: 185 VTISHINISSSKDSYNTDGIDISNSIRVNIHDSIIQSG 222
>Medtr8g010070.1 | polygalacturonase | LC | chr8:2539644-2543850 |
20130731
Length = 390
Score = 162 bits (409), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 89/204 (43%), Positives = 121/204 (59%), Gaps = 12/204 (5%)
Query: 12 NAGSSN--FNIVNYGAKGDGQTDNSQAFVKAWNDMCAATQGAPTLLIPKGKSFMLQPVSF 69
N G+ N +N++ YGA+GDG+ D+S AFV+AWN C A + TL+IP GK+FM+ +SF
Sbjct: 23 NVGTKNAIYNVMKYGARGDGKIDDSLAFVRAWNSACKAAE-MSTLVIPVGKTFMVSKLSF 81
Query: 70 KGPCKSNNVNIELQGTLVAPKSVVAWKWANNNKGAWIDFSGINGLVI--RGGGTFDGQGA 127
GPC + ++ I+L+G +VAP S V WK + WI + GL I G G DG G+
Sbjct: 82 NGPCTNKHILIQLEGKIVAP-SKVHWKA----QSYWITVQSVEGLTINGHGRGVLDGDGS 136
Query: 128 TWWAKYSDDSDRPSALRFHSCKNLALSATNHINSPRNHXXXXXXXXXXXXXXHVTAPEES 187
TWW S DRP FHSCK L +S + NSPR+H + +P S
Sbjct: 137 TWWQCKS--CDRPGVFLFHSCKGLNVSNLSITNSPRSHVAVNMCNGATFSNISINSPGTS 194
Query: 188 PNTDGIDISGSTNILIKDSTIRTG 211
PNTDG DI+ ST+I+I DS I++G
Sbjct: 195 PNTDGFDIALSTHIVIHDSNIKSG 218
>Medtr8g008765.1 | polygalacturonase | LC | chr8:1861927-1866353 |
20130731
Length = 346
Score = 151 bits (381), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 89/215 (41%), Positives = 123/215 (57%), Gaps = 16/215 (7%)
Query: 1 MLLILYARVTPNAGSSN--FNIVNYGAKGDGQTDNSQAFVKAWNDMCAATQGAPTLLIPK 58
+L L R+ N G++N +N++ YGA GDG+TD+SQAF+ A+N C AT G TL+IP
Sbjct: 14 ILPCLCTRL--NVGTTNAIYNVMQYGAHGDGKTDDSQAFINAFNSACKAT-GMSTLVIPA 70
Query: 59 GKSFMLQPVSFKGPCKSNNVNIELQGTLVAPKSVVAWKWANNNKGAWIDFSGINGLVIRG 118
GK+FM+ V F G C + V I+L+G +VAP K + + W +NGL I G
Sbjct: 71 GKTFMVSKVIFSGRCNAK-VRIQLEGQIVAPS-----KANSKAQSYWFTIEYVNGLTIDG 124
Query: 119 GGT--FDGQGATWWAKYSDDSDRPSALRFHSCKNLALSATNHINSPRNHXXXXXXXXXXX 176
G DG G+TWW +RP AL FHSC +L++S NSP +H
Sbjct: 125 NGQGGLDGDGSTWWES---GGERPGALLFHSCNDLSVSNLRITNSPSSHVSINMCNRTTF 181
Query: 177 XXXHVTAPEESPNTDGIDISGSTNILIKDSTIRTG 211
+ +P SPNTDG DIS ST+I I++S I++G
Sbjct: 182 SHVSINSPATSPNTDGFDISFSTDIRIENSNIKSG 216
>Medtr1g013740.1 | polygalacturonase | HC | chr1:3276100-3272148 |
20130731
Length = 390
Score = 149 bits (377), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 79/219 (36%), Positives = 120/219 (54%), Gaps = 22/219 (10%)
Query: 2 LLILYARVTPNA--------GSSNFNIVNYGAKGDGQTDNSQAFVKAWNDMCAATQGAPT 53
LLI+Y + A G ++++YGAKGDG+TD+S+AFV+A+ +C G T
Sbjct: 11 LLIVYILILSIASCNSWVVNGEDTLDVIHYGAKGDGRTDDSKAFVEAFKALCRGRYGN-T 69
Query: 54 LLIPKGKSFMLQP-VSFKGPCKSNNVNIELQGTLVAPKSVVAWKWANNNKGAWIDFSGIN 112
L++P G+SF ++P ++F GPC S N+NI++ G ++APK W WI F I+
Sbjct: 70 LVVPNGRSFFVRPTLNFSGPCHSKNINIKIMGNILAPKRS---DWGRECSLYWIHFFNIH 126
Query: 113 GLVIRGGGTFDGQGATWWAKYSDDSDRPSALRFHSCKNLALSATNHINSPRNHXXXXXXX 172
GL++ G G +G G WW+K AL+F C L ++ HIN P H
Sbjct: 127 GLILDGSGVINGNGEDWWSK---------ALQFDKCDGLQITGLTHINGPGPHIAVTDSQ 177
Query: 173 XXXXXXXHVTAPEESPNTDGIDISGSTNILIKDSTIRTG 211
H+ +P+ES NTDGID++ + + + D IR+G
Sbjct: 178 DITISHIHINSPKESHNTDGIDLTRAIRVNVHDIPIRSG 216
>Medtr8g010080.1 | polygalacturonase | LC | chr8:2548763-2551323 |
20130731
Length = 388
Score = 145 bits (367), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 83/196 (42%), Positives = 114/196 (58%), Gaps = 12/196 (6%)
Query: 18 FNIVNYGAKGDGQTDNSQAFVKAWNDMCAATQGAPTLLIPKGKSFMLQPVSFKGPCKSNN 77
+N++ YGA+GDG++D+S+AF AW+ C A G TL+IP GK FM + F GPC S
Sbjct: 31 YNVMQYGARGDGKSDDSKAFFSAWSSACKAV-GTSTLVIP-GKIFMASKIHFSGPC-SAK 87
Query: 78 VNIELQGTLVAPKSVVAWKWANNNKGAWIDFSGINGLVIRGGG--TFDGQGATWWAKYSD 135
+ I+L+G +VAP S AW+ + WI+ +NGL I G G + G G TWW
Sbjct: 88 ILIQLKGKIVAP-SKAAWRGGSE----WINVEYVNGLTIDGNGEGSVLGDGPTWWQ--CP 140
Query: 136 DSDRPSALRFHSCKNLALSATNHINSPRNHXXXXXXXXXXXXXXHVTAPEESPNTDGIDI 195
RP+ L FHSC +L + +NSPR+H +++P SPNTDG DI
Sbjct: 141 RCSRPTMLHFHSCNDLNVRNLRILNSPRSHVSVNMCNHATFSYISISSPATSPNTDGFDI 200
Query: 196 SGSTNILIKDSTIRTG 211
S S NILI+DS I++G
Sbjct: 201 SHSNNILIQDSNIKSG 216
>Medtr8g010090.1 | polygalacturonase/glycoside hydrolase family
protein | LC | chr8:2553377-2556933 | 20130731
Length = 389
Score = 142 bits (359), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 86/204 (42%), Positives = 114/204 (55%), Gaps = 13/204 (6%)
Query: 12 NAGSSN--FNIVNYGAKGDGQTDNSQAFVKAWNDMCAATQGAPTLLIPKGKSFMLQPVSF 69
N G+ N +N++ YGA+GDG TD+ QAFV A++ C A G TL+IP GK +M+ +F
Sbjct: 23 NVGTENAIYNVIQYGARGDGITDDLQAFVSAFSSACKAA-GMSTLIIPAGKKYMVSKANF 81
Query: 70 KGPCKSNNVNIELQGTLVAPKSVVAWKWANNNKGAWIDFSGINGLVIRGG--GTFDGQGA 127
G C S V I+L+G +VAP S AWK +K WI ++ L I G G F G G
Sbjct: 82 SGRC-SARVLIQLEGQIVAP-SRAAWK----SKLYWISVEYVDELTIDGNNKGGFHGGGP 135
Query: 128 TWWAKYSDDSDRPSALRFHSCKNLALSATNHINSPRNHXXXXXXXXXXXXXXHVTAPEES 187
TWW DRP L FHSC L + +NSPR+H + + S
Sbjct: 136 TWWQ--CPTCDRPVMLFFHSCNGLNVRNLRILNSPRSHVAVTMCNHSTFSHISINSAATS 193
Query: 188 PNTDGIDISGSTNILIKDSTIRTG 211
PNTDG DIS S+N+LI++S IR+G
Sbjct: 194 PNTDGFDISRSSNVLIENSMIRSG 217
>Medtr8g010110.1 | polygalacturonase | LC | chr8:2562133-2566759 |
20130731
Length = 389
Score = 141 bits (355), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 87/220 (39%), Positives = 118/220 (53%), Gaps = 19/220 (8%)
Query: 2 LLILYARVTP------NAGSSN--FNIVNYGAKGDGQTDNSQAFVKAWNDMCAATQGAPT 53
L ++ V+P N G+ N +N++ YGA+GDG TD+ QAFV A++ C A G T
Sbjct: 7 LALILGFVSPCLCTRMNVGTENAIYNVIQYGARGDGITDDLQAFVSAFSSACKAA-GMST 65
Query: 54 LLIPKGKSFMLQPVSFKGPCKSNNVNIELQGTLVAPKSVVAWKWANNNKGAWIDFSGING 113
L+IP GK +M+ +F GPC S V I+L+G +VAP + A+ +K WI +N
Sbjct: 66 LIIPAGKKYMVSKANFSGPC-SARVLIQLEGQIVAPS-----RAASKSKLYWISVKYVNE 119
Query: 114 LVIRGG--GTFDGQGATWWAKYSDDSDRPSALRFHSCKNLALSATNHINSPRNHXXXXXX 171
L I G G F G G TWW DRP L FHSC L + +NSP++H
Sbjct: 120 LTIDGNNKGGFHGGGRTWWQ--CPTCDRPKMLFFHSCNGLNVRNLRILNSPKSHVSVNMC 177
Query: 172 XXXXXXXXHVTAPEESPNTDGIDISGSTNILIKDSTIRTG 211
+ + SPNTDG DIS S NI I++S IR+G
Sbjct: 178 NHSTFSHISINSAAASPNTDGFDISRSNNISIENSKIRSG 217
>Medtr8g010040.1 | polygalacturonase | LC | chr8:2522127-2526378 |
20130731
Length = 388
Score = 140 bits (353), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 81/195 (41%), Positives = 114/195 (58%), Gaps = 9/195 (4%)
Query: 18 FNIVNYGAKGDGQTDNSQAFVKAWNDMCAATQGAPTLLIPKGKSFMLQPVSFKGPCKSNN 77
FN++ YGA+GDG++D+S AF+ AW CAA +GA TL+IP K F++ + F GPCK+ +
Sbjct: 32 FNVMEYGARGDGKSDDSHAFLSAWKSTCAA-KGAATLVIPPQKKFLVTNLLFSGPCKATS 90
Query: 78 VNIELQGTLVAPKSVVAWKWANNNKGAWIDFSGINGLVIRGGGTFDGQ-GATWWAKYSDD 136
++I++QG ++AP +WK + WI +NGL I G G G+TWW+ S
Sbjct: 91 IHIKIQGKIIAPPK-KSWK----SGLGWIRIQYVNGLTIDGTGGGIDGYGSTWWSCIS-- 143
Query: 137 SDRPSALRFHSCKNLALSATNHINSPRNHXXXXXXXXXXXXXXHVTAPEESPNTDGIDIS 196
RP L FHSC +L++ NSP H + +P SPNTDG DIS
Sbjct: 144 CLRPIVLSFHSCNDLSVRKLKITNSPGGHIAINGCYGAKFSNVVIDSPAHSPNTDGFDIS 203
Query: 197 GSTNILIKDSTIRTG 211
S NI+I+DSTI+ G
Sbjct: 204 ASKNIVIEDSTIQAG 218
>Medtr2g103410.2 | polygalacturonase | HC | chr2:44519609-44523183 |
20130731
Length = 333
Score = 138 bits (348), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 72/200 (36%), Positives = 108/200 (54%), Gaps = 10/200 (5%)
Query: 18 FNIVNYGAKGDGQTDNSQAFVKAWNDMCAATQGAPTLLIPKGKSFMLQPVSFKGPCKSNN 77
+I ++GA+GDG +++QAF+K W C+ + G ++ P K+F++ P+ GPC+S
Sbjct: 59 LSIADFGARGDGFHNDTQAFLKVWEIACSLS-GFINIVFPYQKTFLVTPIDIGGPCRSK- 116
Query: 78 VNIELQGTLVAPKSVVAWKWANNNKGAWIDFSGINGLVIRGGGTFDGQGATWWAKYSDDS 137
+ + + G +VAP++ W N K WI F G+N L + GGG DG G WW++ +
Sbjct: 117 ITLRILGAIVAPRNPDVWHGLNKRK--WIYFHGVNHLSVEGGGRIDGMGQEWWSRSCKIN 174
Query: 138 DR------PSALRFHSCKNLALSATNHINSPRNHXXXXXXXXXXXXXXHVTAPEESPNTD 191
P+AL FH CK+L + +NS + H V AP SPNTD
Sbjct: 175 TTNPCLPAPTALTFHKCKSLKVRNLTVLNSQKMHIAFTSCMRVVASRLKVLAPASSPNTD 234
Query: 192 GIDISGSTNILIKDSTIRTG 211
GI IS + + I+DS IRTG
Sbjct: 235 GIHISATKGVEIRDSLIRTG 254
>Medtr2g103410.1 | polygalacturonase | HC | chr2:44519609-44523183 |
20130731
Length = 451
Score = 138 bits (348), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 72/200 (36%), Positives = 108/200 (54%), Gaps = 10/200 (5%)
Query: 18 FNIVNYGAKGDGQTDNSQAFVKAWNDMCAATQGAPTLLIPKGKSFMLQPVSFKGPCKSNN 77
+I ++GA+GDG +++QAF+K W C+ + G ++ P K+F++ P+ GPC+S
Sbjct: 59 LSIADFGARGDGFHNDTQAFLKVWEIACSLS-GFINIVFPYQKTFLVTPIDIGGPCRSK- 116
Query: 78 VNIELQGTLVAPKSVVAWKWANNNKGAWIDFSGINGLVIRGGGTFDGQGATWWAKYSDDS 137
+ + + G +VAP++ W N K WI F G+N L + GGG DG G WW++ +
Sbjct: 117 ITLRILGAIVAPRNPDVWHGLNKRK--WIYFHGVNHLSVEGGGRIDGMGQEWWSRSCKIN 174
Query: 138 DR------PSALRFHSCKNLALSATNHINSPRNHXXXXXXXXXXXXXXHVTAPEESPNTD 191
P+AL FH CK+L + +NS + H V AP SPNTD
Sbjct: 175 TTNPCLPAPTALTFHKCKSLKVRNLTVLNSQKMHIAFTSCMRVVASRLKVLAPASSPNTD 234
Query: 192 GIDISGSTNILIKDSTIRTG 211
GI IS + + I+DS IRTG
Sbjct: 235 GIHISATKGVEIRDSLIRTG 254
>Medtr7g035415.1 | polygalacturonase | LC | chr7:13555483-13559381 |
20130731
Length = 334
Score = 138 bits (348), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 78/196 (39%), Positives = 110/196 (56%), Gaps = 9/196 (4%)
Query: 18 FNIVNYGAKGDGQTDNSQAFVKAWNDMCAATQGAPTLLIPKGKSFMLQPVSFKGPCKSNN 77
++++ +GA+GDG++D++ AF+KAW+ C A TL+IPK KSF++ + G CK+ +
Sbjct: 40 YDVMQHGARGDGKSDDTNAFLKAWSSTCGAGGILATLVIPKNKSFLVNNLVLTGGCKATS 99
Query: 78 VNIELQGTLVAPKSVVAWKWANNNKGAWIDFSGINGLVIRG--GGTFDGQGATWWAKYSD 135
++I+L G +VAP K A +K WI IN L I G GG+ +G G+TWW
Sbjct: 100 IHIKLDGKIVAPA-----KGALKDKSYWIRIQYINHLTIDGGIGGSIEGYGSTWWQ--CK 152
Query: 136 DSDRPSALRFHSCKNLALSATNHINSPRNHXXXXXXXXXXXXXXHVTAPEESPNTDGIDI 195
RP+AL FHS +L + N+P H V +P SPNTDG DI
Sbjct: 153 TCSRPTALFFHSSNDLTVRNLRITNTPGAHIAINGCIGATFSQILVNSPGNSPNTDGFDI 212
Query: 196 SGSTNILIKDSTIRTG 211
S S NI + DSTI TG
Sbjct: 213 SYSKNITVVDSTIATG 228
>Medtr1g013730.1 | polygalacturonase/glycoside hydrolase family
protein | HC | chr1:3280656-3277876 | 20130731
Length = 382
Score = 136 bits (342), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 71/199 (35%), Positives = 108/199 (54%), Gaps = 14/199 (7%)
Query: 14 GSSNFNIVNYGAKGDGQTDNSQAFVKAWNDMCAATQGAPTLLIPKGKSFMLQP-VSFKGP 72
G N+++YGAKGDG+TD+S+AFV A+ +C G TL++P G SF ++P ++F GP
Sbjct: 23 GEDTLNVIHYGAKGDGRTDDSKAFVDAFKALCGGRYGN-TLVVPNGHSFFVRPTLNFSGP 81
Query: 73 CKSNNVNIELQGTLVAPKSVVAWKWANNNKGAWIDFSGINGLVIRGGGTFDGQGATWWAK 132
C S N+NI++ G ++APK W W+ F I+GL + G G +G G W ++
Sbjct: 82 CYSKNINIKIMGNILAPKRS---DWGRECSLMWLHFFNISGLTLDGSGVINGNGEGWESR 138
Query: 133 YSDDSDRPSALRFHSCKNLALSATNHINSPRNHXXXXXXXXXXXXXXHVTAPEESPNTDG 192
AL+F C L ++ HIN P H H+ +P++S NTDG
Sbjct: 139 ---------ALQFDKCDGLQINGLTHINGPGAHIAVIDSQDITISHIHINSPKKSHNTDG 189
Query: 193 IDISGSTNILIKDSTIRTG 211
ID++ + + I D I +G
Sbjct: 190 IDLTRTIGVNIHDIQIESG 208
>Medtr6g005630.2 | polygalacturonase | HC | chr6:863153-867302 |
20130731
Length = 402
Score = 135 bits (340), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 71/204 (34%), Positives = 115/204 (56%), Gaps = 14/204 (6%)
Query: 13 AGSSNFNIVNYGAKGDGQTDNSQAFVKAWNDMCAATQGAPTLLIPKGKSFMLQPVSFKGP 72
A SS FN++++GAKGDG +D+++AF AW C A T+++P G F+++P+SF GP
Sbjct: 40 ATSSTFNVLDFGAKGDGHSDDTKAFEDAWAAACKME--ASTMVVPSGSVFLVKPISFSGP 97
Query: 73 CKSNNVNIELQGTLVAPKSVVAWKWANNNKGAWIDFSGINGLVIRGGGTFDGQGATWWAK 132
N+ +L G ++AP S AW + W++F+ +N + I+G G DGQG+ WW
Sbjct: 98 NCEPNIVFQLDGKIIAPTSPSAW---GSGTLQWLEFTKLNKITIKGKGVIDGQGSVWW-- 152
Query: 133 YSDDSD-----RPSALRFHSCKNLALSATNHINSPRNHXXXXXXXXXXXXXXHVTAPEES 187
+DS+ +P+ALRF+ +++S NS + H ++P +S
Sbjct: 153 --NDSEKLPKTKPTALRFYGSDGVSVSGITIQNSQQTHLKFDSCTNVQVFDITTSSPGDS 210
Query: 188 PNTDGIDISGSTNILIKDSTIRTG 211
PNTDGI + S +++I ST+ G
Sbjct: 211 PNTDGIHLQNSQDVVISGSTLSCG 234
>Medtr7g091840.1 | endo polygalacturonase | HC |
chr7:36349369-36347147 | 20130731
Length = 384
Score = 135 bits (340), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 70/200 (35%), Positives = 110/200 (55%), Gaps = 10/200 (5%)
Query: 18 FNIVNYGAKGDGQTDNSQAFVKAWNDMCAATQGAPTLLIPKGKSFMLQPVSFKGPCKSNN 77
FN+ +YGAKGDG+TD++QAF KAW +C++ G + P+ ++L+P+ F GPCKS
Sbjct: 65 FNVSDYGAKGDGKTDDTQAFEKAWEAVCSSGGGEAVFVAPQDNIYLLKPIRFSGPCKS-K 123
Query: 78 VNIELQGTLVAPKSVVAWKWANNNKGAWIDFSGINGLVIRGGGTFDGQGATWWA------ 131
++ ++ G L+A + + + + G W+ F+ + LV+ GGGT DG+G WW
Sbjct: 124 ISFQISGVLIASNNPSDY---SKDPGHWLVFAKVQQLVVNGGGTLDGKGTIWWENSCKRN 180
Query: 132 KYSDDSDRPSALRFHSCKNLALSATNHINSPRNHXXXXXXXXXXXXXXHVTAPEESPNTD 191
K D P+AL F +C++L + N+ + H V +PE+SPNTD
Sbjct: 181 KNKPCKDAPTALTFANCEDLIVENLKIRNAQQIHISFQDSVNVTASGLIVASPEDSPNTD 240
Query: 192 GIDISGSTNILIKDSTIRTG 211
GI ++ + NI I S G
Sbjct: 241 GIHVTNTQNIKISSSIAAAG 260
>Medtr6g005630.1 | polygalacturonase | HC | chr6:863153-867302 |
20130731
Length = 425
Score = 135 bits (340), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 71/204 (34%), Positives = 115/204 (56%), Gaps = 14/204 (6%)
Query: 13 AGSSNFNIVNYGAKGDGQTDNSQAFVKAWNDMCAATQGAPTLLIPKGKSFMLQPVSFKGP 72
A SS FN++++GAKGDG +D+++AF AW C A T+++P G F+++P+SF GP
Sbjct: 40 ATSSTFNVLDFGAKGDGHSDDTKAFEDAWAAACKME--ASTMVVPSGSVFLVKPISFSGP 97
Query: 73 CKSNNVNIELQGTLVAPKSVVAWKWANNNKGAWIDFSGINGLVIRGGGTFDGQGATWWAK 132
N+ +L G ++AP S AW + W++F+ +N + I+G G DGQG+ WW
Sbjct: 98 NCEPNIVFQLDGKIIAPTSPSAW---GSGTLQWLEFTKLNKITIKGKGVIDGQGSVWW-- 152
Query: 133 YSDDSD-----RPSALRFHSCKNLALSATNHINSPRNHXXXXXXXXXXXXXXHVTAPEES 187
+DS+ +P+ALRF+ +++S NS + H ++P +S
Sbjct: 153 --NDSEKLPKTKPTALRFYGSDGVSVSGITIQNSQQTHLKFDSCTNVQVFDITTSSPGDS 210
Query: 188 PNTDGIDISGSTNILIKDSTIRTG 211
PNTDGI + S +++I ST+ G
Sbjct: 211 PNTDGIHLQNSQDVVISGSTLSCG 234
>Medtr7g091850.1 | endo polygalacturonase | HC |
chr7:36360735-36353948 | 20130731
Length = 450
Score = 132 bits (333), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 73/199 (36%), Positives = 112/199 (56%), Gaps = 12/199 (6%)
Query: 19 NIVNYGAKGDGQTDNSQAFVKAWNDMCAATQGAPTLLIPKGKSFMLQPVSFKGPCKSNNV 78
N+ +YGAKGDG TD++QAF KAW +C++ G L+ P+ +++L+P+ F GPCKSN +
Sbjct: 77 NVRDYGAKGDGHTDDTQAFKKAWEVVCSS--GQSVLVAPQDYNYLLKPIRFSGPCKSN-I 133
Query: 79 NIELQGTLVAPKSVVAWKWANNNKGAWIDFSGINGLVIRGGGTFDGQGATWWA------K 132
++++ G+L A + + + ++ W+ F + L++ GGGT DG+G WW K
Sbjct: 134 SVQISGSLEASDNPSDY---SEDQRHWLVFVEVQQLLVNGGGTIDGKGNIWWENSCKRNK 190
Query: 133 YSDDSDRPSALRFHSCKNLALSATNHINSPRNHXXXXXXXXXXXXXXHVTAPEESPNTDG 192
D P+AL F SCK+L + N+ + H V++P SPNTDG
Sbjct: 191 KKPCKDAPTALTFDSCKDLIVEDLTIQNAQQIHVSFQDSTNVKASGLKVSSPGNSPNTDG 250
Query: 193 IDISGSTNILIKDSTIRTG 211
I I+ + NI I S I TG
Sbjct: 251 IHITNTQNIKISSSIIGTG 269
>Medtr8g077320.1 | pectin lyase superfamily protein | LC |
chr8:32921813-32926670 | 20130731
Length = 364
Score = 129 bits (325), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 74/196 (37%), Positives = 103/196 (52%), Gaps = 31/196 (15%)
Query: 18 FNIVNYGAKGDGQTDNSQAFVKAWNDMCAATQGAPTLLIPKGKSFMLQPVSFKGPCKSNN 77
FN++ YGA+GDG +D++QAF++AWN C A +G TL+IP K + + + F+G CK+ +
Sbjct: 33 FNVIAYGARGDGISDDTQAFLRAWNHTCGA-EGTSTLVIPPKKLYFVNNLEFRGACKATS 91
Query: 78 VNIELQGTLVAPKSVVAWKWANNNKGAWIDFSGINGLVIRGG--GTFDGQGATWWAKYSD 135
+ I++Q +NGL I G G +G G+TWW S
Sbjct: 92 ILIQIQY--------------------------VNGLTIDGTRRGRINGHGSTWWQCKS- 124
Query: 136 DSDRPSALRFHSCKNLALSATNHINSPRNHXXXXXXXXXXXXXXHVTAPEESPNTDGIDI 195
RP L F++C +L++ NSP H V +P SPNTDG DI
Sbjct: 125 -CPRPRILSFYACNDLSVRNVRITNSPGAHGTINGCNRAKISNLDVQSPSHSPNTDGFDI 183
Query: 196 SGSTNILIKDSTIRTG 211
S S NILI+DSTIRTG
Sbjct: 184 SSSKNILIEDSTIRTG 199
>Medtr1g052315.1 | endo polygalacturonase | HC |
chr1:21186740-21183250 | 20130731
Length = 449
Score = 129 bits (324), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 67/200 (33%), Positives = 110/200 (55%), Gaps = 12/200 (6%)
Query: 18 FNIVNYGAKGDGQTDNSQAFVKAWNDMCAATQGAPTLLIPKGKSFMLQPVSFKGPCKSNN 77
FN+ YGA+GDG+TD+++AF K W C++ ++++ K+++++P++F GPCKS +
Sbjct: 64 FNVDQYGAQGDGKTDDTKAFKKVWQVACSS---KGSVVVLAQKNYLVKPITFSGPCKSKS 120
Query: 78 VNIELQGTLVAPKSVVAWKWANNNKGAWIDFSGINGLVIRGGGTFDGQGATWWAKYSDDS 137
+ +++ G+LVA + +K + W+ F + L ++GGGT G G WW +
Sbjct: 121 IVVQISGSLVASDNPSDYK---QDPTHWLMFDSVQKLSVKGGGTIHGNGNIWWQNSCKTN 177
Query: 138 DR------PSALRFHSCKNLALSATNHINSPRNHXXXXXXXXXXXXXXHVTAPEESPNTD 191
+ P+AL + C NL + N N + H VTAPE+SPNTD
Sbjct: 178 KKLPCKEAPTALTLYKCNNLVVEDLNVKNGQQIHVQFQNSANVRVSGLTVTAPEDSPNTD 237
Query: 192 GIDISGSTNILIKDSTIRTG 211
GI ++ + NI I +S I TG
Sbjct: 238 GIHVTNTQNIQISNSIIGTG 257
>Medtr5g033680.1 | polygalacturonase | HC | chr5:14519678-14516292 |
20130731
Length = 470
Score = 126 bits (316), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 68/205 (33%), Positives = 114/205 (55%), Gaps = 16/205 (7%)
Query: 18 FNIVNYGAKGDGQTDNSQAFVKAWNDMCAATQGAPTLLIPKGKSFMLQPVSFKGPCKSNN 77
F+I+++GAKG+G +D+S+AF+ AW CA T+ +P+ F+++P++ +GPC +
Sbjct: 59 FDIMSFGAKGNGVSDDSEAFLAAWK--CACKVSGATIKVPEKLKFLIKPITLQGPCMPD- 115
Query: 78 VNIELQGTLVAPKSVVAWKWANNNKGAWIDFSGINGLVIRGGGTFDGQGATWW--AKYSD 135
+ +++ GT++AP V +W +N WI+F + I+G GT DGQG+ WW +K D
Sbjct: 116 LTLQIDGTILAPPEVSSW--PKSNLFQWINFKWVQNFTIKGYGTIDGQGSNWWSSSKLYD 173
Query: 136 ---------DSDRPSALRFHSCKNLALSATNHINSPRNHXXXXXXXXXXXXXXHVTAPEE 186
S +P+A+RF+S + + NSP H +++PE
Sbjct: 174 IQKTHSKQIPSMKPTAIRFYSSNFVKIRDIKIKNSPLCHLKFDNSKGIKVDNITISSPEN 233
Query: 187 SPNTDGIDISGSTNILIKDSTIRTG 211
SPNTDGI + + ++ I+ S I TG
Sbjct: 234 SPNTDGIHLQNTQDVEIQHSNIGTG 258
>Medtr3g438050.1 | polygalacturonase/glycoside hydrolase family
protein | HC | chr3:13011474-13013852 | 20130731
Length = 395
Score = 125 bits (314), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 80/199 (40%), Positives = 113/199 (56%), Gaps = 14/199 (7%)
Query: 18 FNIVNYGAKGDGQTDNSQAFVKAWNDMCAATQGAPTLLIPKGKSFMLQPVSFKGPCKSNN 77
FN++NYGA DG+TDN +AF+KAW+D C + G TLLIPKG ++M++ V F GPCK +
Sbjct: 27 FNVLNYGAIADGKTDNKEAFLKAWSDACNS-NGKVTLLIPKG-TYMVKQVIFSGPCKG-S 83
Query: 78 VNIELQGTLVAPKSVVAWKWANNNKGAWIDFSGINGLVIRGGGTFDGQGATWWA----KY 133
N ++QGTL AP + +A + WI+F +N LV+ G GT DGQG++ W+ K
Sbjct: 84 TNFKIQGTLKAP---IDPFFATD---KWINFQYVNNLVVGGPGTLDGQGSSAWSVNDCKN 137
Query: 134 SDDSDR-PSALRFHSCKNLALSATNHINSPRNHXXXXXXXXXXXXXXHVTAPEESPNTDG 192
+ + R P ++ F N + NS H ++AP +SPNTDG
Sbjct: 138 NPNCPRLPISMTFDFVTNGTIHHLRSFNSKGAHFKLFACENMIFTKIRISAPGDSPNTDG 197
Query: 193 IDISGSTNILIKDSTIRTG 211
I I S I IK ++I TG
Sbjct: 198 IKIGKSNGITIKSASIGTG 216
>Medtr8g065030.1 | pectin lyase superfamily protein | HC |
chr8:27313786-27310073 | 20130731
Length = 461
Score = 122 bits (307), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 71/199 (35%), Positives = 106/199 (53%), Gaps = 11/199 (5%)
Query: 19 NIVNYGAKGDGQTDNSQAFVKAWNDMCAATQGAPTLLIPKGKSFMLQPVSFKGPCKSNNV 78
NI ++GA G+G+TD+++A KAW C+ + LLIPKG+ +++ F GPCK +N+
Sbjct: 66 NIDSFGAAGNGETDDTEALQKAWGVACSTPKSV--LLIPKGRRYLVNATKFIGPCK-DNL 122
Query: 79 NIELQGTLVAPKSVVAWKWANNNKGAWIDFSGINGLVIRGGGTFDGQGATWWA------K 132
I++ GTLVAP+ W W+DFS + V +G G DG G+ WWA K
Sbjct: 123 IIQIDGTLVAPED--PKNWDPKLPRVWLDFSKLKKAVFQGSGVIDGSGSKWWAASCKKNK 180
Query: 133 YSDDSDRPSALRFHSCKNLALSATNHINSPRNHXXXXXXXXXXXXXXHVTAPEESPNTDG 192
+ P+AL + ++ + NS + H V +P +SPNTDG
Sbjct: 181 TNPCKGAPTALTIDTSSSIKVKGLTIQNSQQMHFTISRCDSVRILGVKVASPGDSPNTDG 240
Query: 193 IDISGSTNILIKDSTIRTG 211
I IS STN++++D I TG
Sbjct: 241 IHISESTNVIVQDCKIGTG 259
>Medtr2g060350.1 | polygalacturonase | HC | chr2:24855141-24858654 |
20130731
Length = 444
Score = 120 bits (302), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 70/199 (35%), Positives = 109/199 (54%), Gaps = 17/199 (8%)
Query: 22 NYGAKGDGQTDNSQAFVKAWNDMCAATQGAPTLLIPKGKSFMLQPVSFKGPCKSNNVNIE 81
++GA+ DG+ D+ +AF KAWN+ C+ L++PK + + L+P++F GPC+ N +
Sbjct: 78 DFGARADGR-DDWEAFKKAWNEACSK---GYVLVVPKNRIYRLKPITFSGPCQPNTAFM- 132
Query: 82 LQGTLVAPKSVVAWKWANNNKGAWIDFSGINGLVIRGGGTFDGQGATWW---AKYS---- 134
L GT+ A + A++ ++ WI F ++ + GGGTF+G G WW KYS
Sbjct: 133 LYGTIEAWSQMSAYE---EDRQHWIVFDSVSNFKVDGGGTFNGNGKKWWENSCKYSNNNL 189
Query: 135 --DDSDRPSALRFHSCKNLALSATNHINSPRNHXXXXXXXXXXXXXXHVTAPEESPNTDG 192
+D RP+A+ F+ CKNL + +S + H V APE+SPNTDG
Sbjct: 190 PCNDEPRPTAVTFYDCKNLKVKNLRFKDSQQMHVVFERCFNVFVSNLIVRAPEDSPNTDG 249
Query: 193 IDISGSTNILIKDSTIRTG 211
I ++ + NI I + I TG
Sbjct: 250 IHVAETQNIDIINCDIGTG 268
>Medtr5g034090.1 | polygalacturonase | HC | chr5:14734905-14739416 |
20130731
Length = 534
Score = 120 bits (301), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 109/229 (47%), Gaps = 37/229 (16%)
Query: 15 SSNFNIVNYGAKGDGQTDNSQAFVKAWNDMCAATQGAPTLLIPKGKSFMLQPVSFKGPCK 74
S+ FN+++YGAKGDG TD+++AF W C A T++IP F + P+SF GP
Sbjct: 118 STFFNVLDYGAKGDGNTDDTKAFQATWAATCKVE--ASTMVIPANYIFYVGPISFSGPYC 175
Query: 75 SNNVNIELQGTLVAPKSVVAWKWANNNKGAWIDFSGINGLVIRGGGTFDGQGATWWAKYS 134
N+ +L GT++AP + AW W++F+ + G+ I+G G DG+G+ WW +
Sbjct: 176 KANIVFQLDGTIIAPTNPNAWSGVTLQ---WLEFTKLEGITIQGNGVIDGRGSVWWQDFP 232
Query: 135 DD--------------------------------SDRPSALRFHSCKNLALSATNHINSP 162
D S++P+ALRF+ ++ NSP
Sbjct: 233 YDNPIDDEEKLIVPLNQTQKPPMPVQNEMGRKMPSNKPTALRFYGSYGPTVTGITIQNSP 292
Query: 163 RNHXXXXXXXXXXXXXXHVTAPEESPNTDGIDISGSTNILIKDSTIRTG 211
+ H +++P +SPNTDGI + S ++LI S + G
Sbjct: 293 QCHLKFDNCNGVLVHDVSISSPGDSPNTDGIHLQNSKDVLIHSSKLACG 341
>Medtr5g034090.2 | polygalacturonase | HC | chr5:14734905-14738756 |
20130731
Length = 416
Score = 120 bits (300), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 109/229 (47%), Gaps = 37/229 (16%)
Query: 15 SSNFNIVNYGAKGDGQTDNSQAFVKAWNDMCAATQGAPTLLIPKGKSFMLQPVSFKGPCK 74
S+ FN+++YGAKGDG TD+++AF W C A T++IP F + P+SF GP
Sbjct: 118 STFFNVLDYGAKGDGNTDDTKAFQATWAATCKVE--ASTMVIPANYIFYVGPISFSGPYC 175
Query: 75 SNNVNIELQGTLVAPKSVVAWKWANNNKGAWIDFSGINGLVIRGGGTFDGQGATWWAKYS 134
N+ +L GT++AP + AW W++F+ + G+ I+G G DG+G+ WW +
Sbjct: 176 KANIVFQLDGTIIAPTNPNAWSGVTLQ---WLEFTKLEGITIQGNGVIDGRGSVWWQDFP 232
Query: 135 DD--------------------------------SDRPSALRFHSCKNLALSATNHINSP 162
D S++P+ALRF+ ++ NSP
Sbjct: 233 YDNPIDDEEKLIVPLNQTQKPPMPVQNEMGRKMPSNKPTALRFYGSYGPTVTGITIQNSP 292
Query: 163 RNHXXXXXXXXXXXXXXHVTAPEESPNTDGIDISGSTNILIKDSTIRTG 211
+ H +++P +SPNTDGI + S ++LI S + G
Sbjct: 293 QCHLKFDNCNGVLVHDVSISSPGDSPNTDGIHLQNSKDVLIHSSKLACG 341
>Medtr8g065010.1 | polygalacturonase plant-like protein | HC |
chr8:27299002-27295111 | 20130731
Length = 521
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 112/230 (48%), Gaps = 38/230 (16%)
Query: 15 SSNFNIVNYGAKGDGQTDNSQAFVKAWNDMCAATQGAPTLLIPKGKSFMLQPVSFKGPCK 74
S+ FN++++GAKGDG++D+++AF W C A T+LIP +F + P+ F GP
Sbjct: 104 STTFNVLDFGAKGDGRSDDTKAFEATWGAACKVE--ASTMLIPADYTFYVGPIVFSGPYC 161
Query: 75 SNNVNIELQGTLVAPKSVVAWKWANNNKGAWIDFSGINGLVIRGGGTFDGQGATWW--AK 132
+ ++ GT++AP + AW W+DF+ + G I+G G FDG+G+ WW +
Sbjct: 162 KPRIIFQVDGTIIAPTNSNAW---GRGLLQWLDFTKLVGFTIQGNGIFDGRGSVWWQDTQ 218
Query: 133 YSDDSD-------------------------------RPSALRFHSCKNLALSATNHINS 161
Y+D D +P+A+RF+ N ++ NS
Sbjct: 219 YNDPLDDEEKLLVPLNNTIVSPPMQIESSLGGKMPSIKPTAIRFYGSINPTVTGITIQNS 278
Query: 162 PRNHXXXXXXXXXXXXXXHVTAPEESPNTDGIDISGSTNILIKDSTIRTG 211
P+ H +++P +SPNTDGI + S ++LI ST+ G
Sbjct: 279 PQCHLKFDNCNGVLVHDVTISSPGDSPNTDGIHLQNSRDVLIYKSTMACG 328
>Medtr2g049400.1 | pectin lyase superfamily protein | LC |
chr2:21772816-21776116 | 20130731
Length = 391
Score = 119 bits (298), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/214 (34%), Positives = 115/214 (53%), Gaps = 11/214 (5%)
Query: 1 MLLILYARVTPNAGSSNFNIVNYGAKGDGQTDNSQAFVKAWNDMCAATQGAPTLLIPKGK 60
+ L ++ + + +++ N+ ++GAK DG D+++ F+ AW+ C + + A T+ +P+G
Sbjct: 11 LFLATFSILFETSNAASINVASFGAKSDGTQDSTKPFLSAWSLACKSNE-ASTIYVPQG- 68
Query: 61 SFMLQPVSFKGPCKSNNVNIELQGTLVAPKSVVAWKWANNNKGAWIDFSGINGLVIRGGG 120
SF+L+ VSF GPC N ++ ++ GT+VAP + N G WI F +N + I GG
Sbjct: 69 SFLLKQVSFWGPCL-NKIDFKIDGTIVAPSKYESL----GNSGYWILFMKVNWVSIYGG- 122
Query: 121 TFDGQGATWWAKYSDDSDRPSALR---FHSCKNLALSATNHINSPRNHXXXXXXXXXXXX 177
TFDG+GA +W P+A R F KN+ +S +NS H
Sbjct: 123 TFDGKGAGYWRCRKAGRSCPAAARSISFSWSKNVLVSGLTSLNSKAIHIAVDHCKNVVIK 182
Query: 178 XXHVTAPEESPNTDGIDISGSTNILIKDSTIRTG 211
+ AP SPNTDGI++ ST + I STI TG
Sbjct: 183 DVKIRAPSRSPNTDGINVQFSTGVTISHSTIMTG 216
>Medtr5g063430.1 | polygalacturonase/glycoside hydrolase family
protein | LC | chr5:26299058-26301816 | 20130731
Length = 315
Score = 119 bits (297), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 76/216 (35%), Positives = 112/216 (51%), Gaps = 18/216 (8%)
Query: 1 MLLILYARVTPNAGSSNFNIVNYGAKGDGQTDNSQAFVKAWNDMCAATQGAPTLLIPKGK 60
+L++L V A FN++ Y A +G TDNS+AF+KAW+D C +G T+LIP G
Sbjct: 8 LLILLVCIVETEAQYKIFNVITYNASSNGNTDNSEAFLKAWSDACKW-KGKSTILIPNG- 65
Query: 61 SFMLQPVSFKGPCKSNNVNIELQGTLVAPKSVVAWKWANNNKGAWIDFSGINGLVIRGGG 120
+ +GPC S ++N L+G L AP + +A++N WI+F +N L++ GGG
Sbjct: 66 -----TYTLRGPCNS-SINFRLEGLLKAP--IDPKSFASDN---WINFKYVNKLMVGGGG 114
Query: 121 TFDGQGATWW-----AKYSDDSDRPSALRFHSCKNLALSATNHINSPRNHXXXXXXXXXX 175
+ D QGA W K + P++++F N + + NS ++H
Sbjct: 115 SLDAQGAYAWKMNDCQKNPNCRPLPTSMKFDYITNGYIHHMHSFNSKQSHFGLYRCNNMT 174
Query: 176 XXXXHVTAPEESPNTDGIDISGSTNILIKDSTIRTG 211
+ AP +SPNTDGI I ST I I IRTG
Sbjct: 175 LTKLQIKAPGDSPNTDGIKIGKSTGINITSVNIRTG 210
>Medtr1g086390.1 | polygalacturonase/glycoside hydrolase family
protein | HC | chr1:38659765-38662894 | 20130731
Length = 477
Score = 118 bits (296), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 101/211 (47%), Gaps = 14/211 (6%)
Query: 13 AGSSNFNIVNYGAKGDGQTDNSQAFVKAWNDMCAATQGAPTLLIPKGKSFMLQPVSFKGP 72
S ++ +GA GDG TD++++F AW+ C + + +P G SF++Q F GP
Sbjct: 76 VASGLLDVRKFGAIGDGITDDTESFKMAWDTACQSELDLNVIFVPPGFSFIVQSTIFTGP 135
Query: 73 CKSNNVNIELQGTLVAPKSVVAWKWANNNKGAWIDFSGINGLVIRGGGTFDGQGATWW-- 130
CK V +++ GT++ P +W NN++ W+ F +NG+ + G GT DG+G WW
Sbjct: 136 CKGGLV-LKVDGTIMTPDGPESW-LKNNSRRQWLVFYRVNGMSLEGSGTIDGRGQKWWDL 193
Query: 131 ----------AKYSDDSDRPSALRFHSCKNLALSATNHINSPRNHXXXXXXXXXXXXXXH 180
D P A+RF NL + NSP+ H
Sbjct: 194 PCKPHKGPNGTTLPGPCDSPVAIRFFMSSNLTVQGLRIKNSPQFHFRFDGCQSVHVESIF 253
Query: 181 VTAPEESPNTDGIDISGSTNILIKDSTIRTG 211
+TAP SPNTDGI I + ++ I +S + G
Sbjct: 254 ITAPALSPNTDGIHIENTNDVKIYNSVVSNG 284
>Medtr3g030540.1 | polygalacturonase | LC | chr3:9670728-9674889 |
20130731
Length = 437
Score = 117 bits (293), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 73/214 (34%), Positives = 109/214 (50%), Gaps = 16/214 (7%)
Query: 6 YARVTPNAGSSN-FNIVNYGAKG-DGQTDNSQAFVKAWNDMCAATQGAPTLLIPKGKSFM 63
+ + P+ S N N+ +YGAK DGQ DN +AF AWN+ C+ L++PK +
Sbjct: 57 HPSIAPSPQSHNTVNVNDYGAKSNDGQVDN-EAFEMAWNEACS---NGKVLVVPKQSVYH 112
Query: 64 LQPVSFKGPCKSNNVNIELQGTLVAPKSVVAWKWANNNKGAWIDFSGINGLVIRGGGTFD 123
L P++F GPC+ N +++ GT+ A + A+ ++ WI F + L++ GGGT +
Sbjct: 113 LNPITFSGPCQPNTA-LKIYGTIKAWPRISAY---GADRKLWIKFENVTNLIVDGGGTIN 168
Query: 124 GQGATWWAKYSDDSDR------PSALRFHSCKNLALSATNHINSPRNHXXXXXXXXXXXX 177
G G WW ++ P+A+ F C NL + N+ + H
Sbjct: 169 GNGRIWWENSCKVNESLPCKGAPTAVTFDECNNLKVDKIRFRNAQQMHLRIQGCNNVWAS 228
Query: 178 XXHVTAPEESPNTDGIDISGSTNILIKDSTIRTG 211
VTAP SPNTDGI I+ S N+ I +STI TG
Sbjct: 229 NLIVTAPGHSPNTDGIHITHSQNVFITNSTIGTG 262
>Medtr4g083660.1 | polygalacturonase | HC | chr4:32524282-32522029 |
20130731
Length = 374
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 74/201 (36%), Positives = 113/201 (56%), Gaps = 11/201 (5%)
Query: 15 SSNFNIVNYGAKGDGQTDNSQAFVKAWNDMCAATQGAPTLLIPKGKSFMLQPVSFKGPCK 74
SS +N++NYGAK DG+TD+++AF W C++ A ++ +P+GK F+L +F G C
Sbjct: 6 SSTYNVINYGAKPDGKTDSTKAFGNVWAKACSSPYPA-SIYVPQGK-FLLGTATFSGKCI 63
Query: 75 SNNVNIELQGTLVAPKSVVAWKWANNNKGAWIDFSGINGLVIRGGGTFDGQG-ATWWAKY 133
+ ++I + GTLVA + ++ N G W+ F ++G+ IR GG DGQG A W K
Sbjct: 64 NKAISITIDGTLVASSN---YRVTGKN-GNWLKFQHVDGVSIR-GGLLDGQGTALWDCKN 118
Query: 134 SDDSDRP---SALRFHSCKNLALSATNHINSPRNHXXXXXXXXXXXXXXHVTAPEESPNT 190
SD S+ P + L F + KN+ +S +NS H ++ A SPNT
Sbjct: 119 SDKSNCPIGATTLEFSNSKNIMISGLTSMNSQMFHIVFNGCENVKMQGVNIMAAGNSPNT 178
Query: 191 DGIDISGSTNILIKDSTIRTG 211
DGI + S+++ I +S IRTG
Sbjct: 179 DGIHVQMSSHVTIVNSKIRTG 199
>Medtr4g120320.1 | polygalacturonase | HC | chr4:49884372-49886301 |
20130731
Length = 422
Score = 115 bits (287), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 72/209 (34%), Positives = 106/209 (50%), Gaps = 19/209 (9%)
Query: 14 GSSNFNIVNYGAKGDGQTDNSQAFVKAWNDMCAATQGAPTLLIPKGKSFMLQPVSFKGPC 73
G N++++GAKGDG TD +QAF++ W +C G +P G+ F++ + F GPC
Sbjct: 48 GEKLVNVLSFGAKGDGVTDCTQAFMQTWQAVCKKP-GQNRFYVPAGR-FLVSEIIFAGPC 105
Query: 74 KSNN-VNIELQGTLVAPKSVVAWKWANNNKGAWIDFSGINGLVIRGGGTFDGQGATWWAK 132
+ V I++ GT++A + ++AN G W +F +NGL + GGGTFDGQG W K
Sbjct: 106 LAPKPVTIQVVGTILATTDI--SEYAN---GRWFEFQDLNGLKMLGGGTFDGQGQESW-K 159
Query: 133 YSDDSDR----------PSALRFHSCKNLALSATNHINSPRNHXXXXXXXXXXXXXXHVT 182
+++D P +L F +N + +N H +T
Sbjct: 160 FAEDCKSGNGDTACVPNPPSLYFTKVQNAIIMGIKSVNPKGFHVFVTQCSNIRLQRLRLT 219
Query: 183 APEESPNTDGIDISGSTNILIKDSTIRTG 211
AP+ SPNTDGI IS S + I TI TG
Sbjct: 220 APDTSPNTDGIHISTSYGVKINRCTIGTG 248
>Medtr7g110050.1 | polygalacturonase/glycoside hydrolase family
protein | HC | chr7:45103855-45101037 | 20130731
Length = 462
Score = 114 bits (285), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 110/211 (52%), Gaps = 13/211 (6%)
Query: 12 NAGSSNFNIVNYGAKGDGQTDNSQAFVKAWNDMCAATQGAPTLLIPKGKSFMLQPVSFKG 71
N S F++ ++GA GDG D++++F AW+ C +L+P+G SF++Q F G
Sbjct: 61 NNASGIFDVRSFGAIGDGIEDDTESFKMAWDTACQNGSDVNVILVPQGFSFVIQSTIFTG 120
Query: 72 PCKSNNVNIELQGTLVAPKSVVAWKWANNNKGAWIDFSGINGLVIRGGGTFDGQGATWW- 130
PC+ + + ++ GT++AP +W NN++ W+ F + G+ + G G+ DG+G WW
Sbjct: 121 PCQGDLI-FKVDGTVLAPDGPESWP-KNNSRRQWLVFYRMKGMSLEGSGSIDGRGQKWWD 178
Query: 131 -----AKYSDDS-----DRPSALRFHSCKNLALSATNHINSPRNHXXXXXXXXXXXXXXH 180
K S+ + D P A+RF NL + NSP+ + +
Sbjct: 179 LPCKPHKGSNGTALGTCDSPIAIRFFMSSNLTVKGLKVKNSPQFNFRFDACNNVHIESIY 238
Query: 181 VTAPEESPNTDGIDISGSTNILIKDSTIRTG 211
+TAP+ SPNTDGI + + ++ I +S I G
Sbjct: 239 ITAPKISPNTDGIHLEYANDVKIYNSVISNG 269
>Medtr8g030930.1 | polygalacturonase/glycoside hydrolase family
protein | LC | chr8:11531499-11533056 | 20130731
Length = 399
Score = 111 bits (278), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 79/216 (36%), Positives = 115/216 (53%), Gaps = 13/216 (6%)
Query: 2 LLILYARVTPNAGSSNFNIVNYGAKGDGQTDNSQAFVKAWNDMCA-ATQGAPTLLIPKGK 60
LL+ A + FN++NYGA+ DG TDNS AF+KAW+D C + +G T+LIP+G
Sbjct: 11 LLVCIAEAHRQIQNKLFNVINYGARSDGNTDNSAAFLKAWSDACRWSGKGKATVLIPQG- 69
Query: 61 SFMLQPVSFKGPCKSNNVNIELQGTLVAPKSVVAWKWANNNKGAWIDFSGINGLVIRGGG 120
++ML+ V F GPC + +N ++G L AP ++K G WI+F +N L + GGG
Sbjct: 70 TYMLKEVVFSGPCNA-WMNFHIEGLLKAPSDPYSFK-----NGDWINFRYVNKLTVGGGG 123
Query: 121 TFDGQGATWW-----AKYSDDSDRPSALRFHSCKNLALSATNHINSPRNHXXXXXXXXXX 175
GQG++ W K S+ P ++F N + + I+S ++H
Sbjct: 124 ILYGQGSSAWKTNDCKKNSNCRSLPITMKFDFITNGYVHDMHSIDSKQSHFVLFGCENML 183
Query: 176 XXXXHVTAPEESPNTDGIDISGSTNILIKDSTIRTG 211
+TAP++SPNTDGI I S I I I TG
Sbjct: 184 LRGLKITAPKDSPNTDGIKIGMSKGINISSVNIGTG 219
>Medtr4g094715.1 | pectin lyase superfamily protein | HC |
chr4:38832640-38835379 | 20130731
Length = 461
Score = 110 bits (274), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 101/206 (49%), Gaps = 16/206 (7%)
Query: 18 FNIVNYGAKGDGQTDNSQAFVKAWNDMCAATQGAPTLLIPKGKSFMLQPVSFKGPCKSNN 77
F++ ++GA GDG D++ AF KAW CA G LL+P+ +FM+ + F GPCK
Sbjct: 65 FDVTSFGAIGDGSADDTPAFKKAWKAACAVESG--ILLVPENYTFMITSIIFSGPCKPGL 122
Query: 78 VNIELQGTLVAPKSVVAWKWANNNKGAWIDFSGINGLVIRGGGTFDGQGATWW------- 130
V ++ G L+AP +W A++ + W+ F ++ + + G GT +G G WW
Sbjct: 123 V-FQVDGMLMAPDGPDSWPEADS-RNQWLVFYKLDQMSLNGTGTIEGNGDQWWDLPCKPH 180
Query: 131 -----AKYSDDSDRPSALRFHSCKNLALSATNHINSPRNHXXXXXXXXXXXXXXHVTAPE 185
S P+ +RF NL ++ NSP+ H ++AP+
Sbjct: 181 RGPDGKTLSGPCGSPAMIRFFMSSNLYVNGLKIENSPQFHMIFNGCQGVMINMLSISAPK 240
Query: 186 ESPNTDGIDISGSTNILIKDSTIRTG 211
SPNTDGI + S ++ I +S I G
Sbjct: 241 LSPNTDGIHVENSKDVGIYNSLISNG 266
>Medtr1g088160.1 | polygalacturonase | HC | chr1:39392282-39390473 |
20130731
Length = 407
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 95/201 (47%), Gaps = 13/201 (6%)
Query: 18 FNIVNYGAKGDGQTDNSQAFVKAWNDMCAATQGAPTLLIPKGKSFMLQPVSFKGPCKSNN 77
+++ +GA DG+TDN + AW C + T+LIP G +F+ F GPC S
Sbjct: 35 YDVTKFGAVADGKTDNVEKIRAAWQAACKTSTVPATVLIPAG-TFVTGQTLFAGPCTSPK 93
Query: 78 -VNIELQGTLVAPKSVVAWKWANNNKGAWIDFSGINGLVIRGGGTFDGQGATWWAKYSDD 136
+ +E+ G A + + W F I+GLV++G G FDGQG+ W
Sbjct: 94 PITVEIVGKAQATTDLSEYYSPE-----WFQFENIDGLVLKGSGVFDGQGSISWPLNDCK 148
Query: 137 SDR------PSALRFHSCKNLALSATNHINSPRNHXXXXXXXXXXXXXXHVTAPEESPNT 190
++ PS+L+F KN + +NS + H H+TAP SPNT
Sbjct: 149 QNKGNCASLPSSLKFDKIKNAIVQDVTSLNSMQFHFHLHGCSNISFTNLHITAPGNSPNT 208
Query: 191 DGIDISGSTNILIKDSTIRTG 211
DG+ IS S I + +S I TG
Sbjct: 209 DGMHISSSDFITVTNSVIATG 229
>Medtr2g435640.1 | polygalacturonase | HC | chr2:13796366-13791435 |
20130731
Length = 423
Score = 105 bits (261), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 110/215 (51%), Gaps = 18/215 (8%)
Query: 7 ARVTPNAGSSNFNIVNYGAKGDGQTDNSQAFVKAWNDMCAATQGAPTLLIPKGKSFMLQP 66
A+ T G N++++GAK DG++D +QAF+ W C + A LLIP G+ F++
Sbjct: 42 AKDTLAPGEKIINVMSFGAKPDGKSDCTQAFMDGWQAACKSKVQA-RLLIPSGR-FLVSS 99
Query: 67 VSFKGPCKSNN-VNIELQGTLVAPKSVVAWKWANNNKGAWIDFSGINGLVIRGGGTFDGQ 125
+ F GPC + + I++ GT+VA + ++ G W+ F I+GL + GGGTFDGQ
Sbjct: 100 MFFSGPCLTPGPITIQVVGTVVATTDI-----SDYVDGEWLMFQKISGLKLIGGGTFDGQ 154
Query: 126 GATWWAKYSDDSDR---------PSALRFHSCKNLALSATNHINSPRNHXXXXXXXXXXX 176
G + W KY+++ + PS++ F+ + + + H
Sbjct: 155 GQSSW-KYAENCETNPTNQCVRAPSSIYFNQVTDGIIQNIKSKDPKGFHVFVTNSANIRL 213
Query: 177 XXXHVTAPEESPNTDGIDISGSTNILIKDSTIRTG 211
+ AP SPNTDG+ IS S N+ I S++ TG
Sbjct: 214 RLIKLNAPATSPNTDGLHISHSINVKISRSSVETG 248
>Medtr8g009810.1 | pectin lyase superfamily protein | HC |
chr8:2423952-2426973 | 20130731
Length = 400
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 103/213 (48%), Gaps = 9/213 (4%)
Query: 2 LLILYARVTPNAGSSNFNIVNYGAKGDGQTDNSQAFVKAWNDMCAATQGAPTLLIPKGKS 61
L + + + N NIV++GA +G++D+ A + AW C++T T+ +P G+
Sbjct: 19 LFMFFTFKSTNGIEETLNIVSFGANPNGESDSKNAILTAWTSACSSTT-PTTIYVPIGRF 77
Query: 62 FMLQPVSFKGPCKSNNVNIELQGTLVAPKSVVAWKWANNNKGAWIDFSGINGLVIRGGGT 121
+ V FKG C + + + + GTLVA + N+G+W+ F ++G+ I GG
Sbjct: 78 LVGGSVVFKGRCNNKGITVRIDGTLVATSNYGVI----GNEGSWLLFDDVDGVSIIGG-I 132
Query: 122 FDGQGATWWAKYSDDSDRPSA---LRFHSCKNLALSATNHINSPRNHXXXXXXXXXXXXX 178
DGQG + W P+ LRF + N+ ++ +NS H
Sbjct: 133 LDGQGTSLWDCKRSSKSCPTGATNLRFSNSNNIVMNGVTSLNSQMFHIVIDRCNNVKVQG 192
Query: 179 XHVTAPEESPNTDGIDISGSTNILIKDSTIRTG 211
VTA SPNTDGI + S+++ I +S I TG
Sbjct: 193 VKVTAAGNSPNTDGIHVQLSSSVTILNSNIETG 225
>Medtr2g032710.2 | polygalacturonase plant-like protein | HC |
chr2:12319301-12315408 | 20130731
Length = 463
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 94/206 (45%), Gaps = 16/206 (7%)
Query: 18 FNIVNYGAKGDGQTDNSQAFVKAWNDMCAATQGAPTLLIPKGKSFMLQPVSFKGPCKSNN 77
F++ ++GA GDG D++ AF AW CA G LL P+ F + F GPCK
Sbjct: 67 FDVRSFGAVGDGDADDTAAFRAAWKAACAVDSGV--LLAPENYCFKITSTIFSGPCKPGL 124
Query: 78 VNIELQGTLVAPKSVVAWKWANNNKGAWIDFSGINGLVIRGGGTFDGQGATWW------- 130
V ++ GTL+AP W A++ K W+ F ++ + + G G +G G WW
Sbjct: 125 V-FQIDGTLMAPDGPNCWPEADS-KSQWLVFYRLDQMTLNGTGIIEGNGEQWWDLPCKPH 182
Query: 131 -----AKYSDDSDRPSALRFHSCKNLALSATNHINSPRNHXXXXXXXXXXXXXXHVTAPE 185
S P+ +RF NL L NSP+ H ++AP+
Sbjct: 183 RSPDGKTVSGPCVSPTMIRFFMSSNLVLRGLKIQNSPQFHVKFDGCQGVLIDELSISAPK 242
Query: 186 ESPNTDGIDISGSTNILIKDSTIRTG 211
SPNTDGI + + ++ I +S I G
Sbjct: 243 LSPNTDGIHLGNTRDVGIYNSLISNG 268
>Medtr2g032710.1 | polygalacturonase plant-like protein | HC |
chr2:12322300-12315408 | 20130731
Length = 463
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 94/206 (45%), Gaps = 16/206 (7%)
Query: 18 FNIVNYGAKGDGQTDNSQAFVKAWNDMCAATQGAPTLLIPKGKSFMLQPVSFKGPCKSNN 77
F++ ++GA GDG D++ AF AW CA G LL P+ F + F GPCK
Sbjct: 67 FDVRSFGAVGDGDADDTAAFRAAWKAACAVDSGV--LLAPENYCFKITSTIFSGPCKPGL 124
Query: 78 VNIELQGTLVAPKSVVAWKWANNNKGAWIDFSGINGLVIRGGGTFDGQGATWW------- 130
V ++ GTL+AP W A++ K W+ F ++ + + G G +G G WW
Sbjct: 125 V-FQIDGTLMAPDGPNCWPEADS-KSQWLVFYRLDQMTLNGTGIIEGNGEQWWDLPCKPH 182
Query: 131 -----AKYSDDSDRPSALRFHSCKNLALSATNHINSPRNHXXXXXXXXXXXXXXHVTAPE 185
S P+ +RF NL L NSP+ H ++AP+
Sbjct: 183 RSPDGKTVSGPCVSPTMIRFFMSSNLVLRGLKIQNSPQFHVKFDGCQGVLIDELSISAPK 242
Query: 186 ESPNTDGIDISGSTNILIKDSTIRTG 211
SPNTDGI + + ++ I +S I G
Sbjct: 243 LSPNTDGIHLGNTRDVGIYNSLISNG 268
>Medtr8g008700.1 | polygalacturonase | LC | chr8:1829561-1832039 |
20130731
Length = 292
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 70/134 (52%), Gaps = 10/134 (7%)
Query: 80 IELQGTLVAPKSVVAWKWANNNKGAWIDFSGINGLVIRGGGT--FDGQGATWWAKYSDDS 137
++L+G +VAP K + + W +NGL I G G DG G+TWW
Sbjct: 14 LQLEGQIVAPS-----KANSKAQSYWFTIEYVNGLTIDGNGQGGLDGDGSTWWES---GG 65
Query: 138 DRPSALRFHSCKNLALSATNHINSPRNHXXXXXXXXXXXXXXHVTAPEESPNTDGIDISG 197
+RP AL FHSC +L++S NSP +H + +P SPNTDG DIS
Sbjct: 66 ERPGALLFHSCNDLSVSNLRITNSPSSHVSINMCNRTTFSHVSINSPATSPNTDGFDISF 125
Query: 198 STNILIKDSTIRTG 211
ST+I I++S I++G
Sbjct: 126 STDIRIENSNIKSG 139
>Medtr2g058670.1 | polygalacturonase 11c, putative | HC |
chr2:24244330-24242502 | 20130731
Length = 419
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 92/208 (44%), Gaps = 18/208 (8%)
Query: 13 AGSSNFNIVNYGAKGDGQTDNSQAFVKAWNDMCAATQGAPTLLIPKGKSFMLQPVSFKGP 72
A S +I +G K + +D A AW + CA+T A ++IP G ++ L + KGP
Sbjct: 20 AQSGVLDIAKFGGKPN--SDIGMALTAAWKEACASTTAA-KIVIPAG-TYQLNGIELKGP 75
Query: 73 CKSNNVNIELQGTLVAPKSVVAWKWANNNKGAWIDFSGINGLVIRGGGTFDGQGATW--- 129
CK+ + +++ GT+ AP K W F ++ L + G G FDGQGA+
Sbjct: 76 CKAP-IELQVDGTIQAPADPSVIKGTEQ----WFKFLYMDHLTLSGKGVFDGQGASVYKK 130
Query: 130 ------WAKYSDDSDRPSALRFHSCKNLALSATNHINSPRNHXXXXXXXXXXXXXXHVTA 183
W+ +S F+ N + +S H +TA
Sbjct: 131 AQPAAAWSGKGGNSKNFMNFGFNFVNNSLVHGVTSKDSKNFHVMVFGCNNITFDSFTITA 190
Query: 184 PEESPNTDGIDISGSTNILIKDSTIRTG 211
P +SPNTDGI + ST + I ++ I TG
Sbjct: 191 PGDSPNTDGIHMGKSTGVKILNTNIGTG 218
>Medtr2g058840.1 | polygalacturonase 11c, putative | HC |
chr2:24297949-24299598 | 20130731
Length = 417
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 94/211 (44%), Gaps = 26/211 (12%)
Query: 13 AGSSNFNIVNYGAKGDGQTDNSQAFVKAWNDMCAATQGAPTLLIPKGKSFMLQPVSFKGP 72
A S +I +G K + +D A AW + CA+T A ++IP G ++ L + KGP
Sbjct: 20 AQSGVLDIAKFGGKPN--SDIGMALTAAWKEACASTTAA-KIVIPAG-TYQLNGIELKGP 75
Query: 73 CKSNNVNIELQGTLVAPKSVVAWKWANNNKGAWIDFSGINGLVIRGGGTFDGQGATWWAK 132
CK+ + +++ GT+ AP K W F ++ L + G G FDGQGA+ + K
Sbjct: 76 CKAP-IELQVDGTIQAPADPSVIKGTEQ----WFKFLYMDHLTLSGKGVFDGQGASVYKK 130
Query: 133 YSDDSDRPSA------------LRFHSCKNLALSATNHINSPRNHXXXXXXXXXXXXXXH 180
+P+A F+ N + +S H
Sbjct: 131 A-----QPAAAWSVFLVQFQQNFGFNFVNNSLVHGVTSKDSKNFHVMVFGCNNITFDSFT 185
Query: 181 VTAPEESPNTDGIDISGSTNILIKDSTIRTG 211
+TAP +SPNTDGI + ST + I ++ I TG
Sbjct: 186 ITAPGDSPNTDGIHMGKSTGVKILNTNIGTG 216
>Medtr2g058640.1 | polygalacturonase 11c, putative | HC |
chr2:24232613-24230991 | 20130731
Length = 407
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 93/203 (45%), Gaps = 18/203 (8%)
Query: 18 FNIVNYGAKGDGQTDNSQAFVKAWNDMCAATQGAPTLLIPKGKSFMLQPVSFKGPCKSNN 77
+I +G G +D + A AW + CA+T A ++IP G ++ + + KGPCK+
Sbjct: 25 LDISKFG--GAPNSDITLALGNAWKEACASTT-ASKIVIPGG-TYKMGGIELKGPCKAP- 79
Query: 78 VNIELQGTLVAPKSVVAWKWANNNKGAWIDFSGINGLVIRGGGTFDGQGATW-------- 129
+ +++ GT+ AP K A+ W+ F + L + G G FDGQGAT
Sbjct: 80 IEVQVDGTIQAPADPSQIKAADQ----WVKFLYMEHLTLSGKGVFDGQGATAYKQAQPAA 135
Query: 130 -WAKYSDDSDRPSALRFHSCKNLALSATNHINSPRNHXXXXXXXXXXXXXXHVTAPEESP 188
W+ + L F N ++ +S H VTAP +SP
Sbjct: 136 AWSGKKSNVKILMNLGFMFVNNSMVTGVTSKDSKNFHVMVLGCNNFTFDGFTVTAPSDSP 195
Query: 189 NTDGIDISGSTNILIKDSTIRTG 211
NTDGI + ST++ I ++ I TG
Sbjct: 196 NTDGIHMGRSTDVKILNTNIGTG 218
>Medtr7g113910.1 | polygalacturonase | HC | chr7:46964803-46959130 |
20130731
Length = 376
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 63/137 (45%), Gaps = 22/137 (16%)
Query: 81 ELQGTLVAPKSVVAWKWANNNKGAWIDFSGINGLVIRGGGTFDGQGATWWAKYSDDSDR- 139
++ GT+VAP+ W NGL RGGG DG G WW++ +
Sbjct: 74 QISGTIVAPQDPEVW----------------NGLNKRGGGRIDGMGQEWWSRSCKINTTN 117
Query: 140 -----PSALRFHSCKNLALSATNHINSPRNHXXXXXXXXXXXXXXHVTAPEESPNTDGID 194
P++L FH CK+L + +NS + H +V+AP SPNTDGI
Sbjct: 118 PCHPAPTSLTFHRCKSLKVRNLTVVNSQKMHIAFTRCMRVVVSRLNVSAPSSSPNTDGIH 177
Query: 195 ISGSTNILIKDSTIRTG 211
IS + I I S ++TG
Sbjct: 178 ISATKGIEISHSDVKTG 194
>Medtr2g029170.1 | endo-polygalacturonase | HC |
chr2:10881421-10882932 | 20130731
Length = 361
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 78/163 (47%), Gaps = 10/163 (6%)
Query: 53 TLLIPKGKSFMLQPVSFKGPCKSNNVNIELQGTLVAPKSVVAWKWANNNKGAWIDFSGIN 112
T+ +P GK F+L V+F+G C + +++I + GTLVAP A+ W+ F ++
Sbjct: 30 TIYVPHGK-FLLGRVTFRGECTNKDISIIIDGTLVAPSDYHVIGEAS----YWLTFENVS 84
Query: 113 GLVIRGGGTFDGQGATWWAKYSDDSDRPSALRFHS----CKNLALSATNHINSPRNHXXX 168
G+ I GG DG+G + W + P ++ N+ ++ +NS H
Sbjct: 85 GVKIHGG-VLDGKGTSLWDCKNSGKSCPMGAAVNTWNFNSDNIIITGLTSLNSQMFHIVI 143
Query: 169 XXXXXXXXXXXHVTAPEESPNTDGIDISGSTNILIKDSTIRTG 211
+ AP+ SPNTDGI + S++I I IRTG
Sbjct: 144 RECRNVKVDGVKIIAPKNSPNTDGIHVQSSSDITILKPRIRTG 186
>Medtr5g090160.1 | polygalacturonase/glycoside hydrolase family
protein | HC | chr5:39275416-39270733 | 20130731
Length = 450
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 99/218 (45%), Gaps = 27/218 (12%)
Query: 15 SSNFNIVNYGAKGDGQTDNSQAFVKAWNDMCAATQ--GAPTLLIPKGKSFMLQPVSFKGP 72
+ N ++ ++G GDG T N++AF +A + +Q G TL +P G ++ +P +
Sbjct: 41 TDNISLTDFGGVGDGHTLNTKAFREAIYRINHLSQREGGTTLYVPPG-VYLTEPFNL--- 96
Query: 73 CKSNNVNIELQGTLVAPKSVVAWKW---------------ANNNKGAWIDFSGINGLVIR 117
++++ + L V + + W ++I G+ +VI
Sbjct: 97 --TSHMTLHLAAGAVIKATQDSSNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVIT 154
Query: 118 G-GGTFDGQGATWW---AKYSDDSDRPSALRFHSCKNLALSATNHINSPRNHXXXXXXXX 173
G GT DGQG WW K + RP+ + F + K++ +S +SP +
Sbjct: 155 GENGTIDGQGDVWWNMWRKRTLQFTRPNLVEFVNSKDIIISNVIFKDSPFWNIHPVYCSN 214
Query: 174 XXXXXXHVTAPEESPNTDGIDISGSTNILIKDSTIRTG 211
+ AP +SPNTDGID S+N+ I+DS I TG
Sbjct: 215 VVIRFATILAPRDSPNTDGIDPDSSSNVCIEDSYISTG 252
>Medtr1g099850.1 | pectin lyase superfamily protein | HC |
chr1:45068986-45067030 | 20130731
Length = 475
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 96/215 (44%), Gaps = 16/215 (7%)
Query: 12 NAGSSNFNIVNYGAKGDGQTDNSQAFVKAWNDMCA-ATQGAPTLLIPKGK----SFMLQP 66
N N + ++GA GDG+T N++AF A ++ A G L++P GK SF L
Sbjct: 49 NCRKHNAVLTDFGAVGDGKTLNTKAFNSAITNLSQYANDGGAQLIVPPGKWLTGSFNLTS 108
Query: 67 VSFKGPCKSNNVNIELQGTLVAPK-----SVVAWKWANNNKGAWIDF-SGINGLVIRGG- 119
F + V + Q PK S K A + + + + F + + +VI G
Sbjct: 109 -HFTLFLQKGAVILASQDESEWPKLSFLPSYGREKDAPDGRFSSLIFGTNLTDVVITGNN 167
Query: 120 GTFDGQGATWWAKYSDDS---DRPSALRFHSCKNLALSATNHINSPRNHXXXXXXXXXXX 176
GT DGQG+TWW K+ RP + + +S INSP
Sbjct: 168 GTIDGQGSTWWDKFQKKQLKITRPYMIEIMYSDQIQISNLTLINSPNWFVHPIYSSNIII 227
Query: 177 XXXHVTAPEESPNTDGIDISGSTNILIKDSTIRTG 211
+ AP + PNTDGID TN+LI+D+ I +G
Sbjct: 228 NRLTILAPVDVPNTDGIDPDSCTNVLIEDNYIVSG 262
>Medtr3g449590.1 | polygalacturonase/glycoside hydrolase family
protein | HC | chr3:16895715-16889169 | 20130731
Length = 451
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 92/218 (42%), Gaps = 34/218 (15%)
Query: 18 FNIVNYGAKGDGQTDNSQAFVKA-WNDMCAATQGAPTLLIPKGKSFMLQPVSFKGPCKSN 76
+I ++G GDG+T NS+AF A + +G L +P G +S
Sbjct: 47 ISITDFGGVGDGKTLNSKAFRAAIYRIQHLRRRGGTLLYVPPGVYL----------TESF 96
Query: 77 NVNIELQGTLVAPKSVVAWKWANN----------------NKGAWIDF---SGINGLVIR 117
N+ + L A + A + N G +I F G+ ++I
Sbjct: 97 NLTSHMTLYLAAGAVIKATQRLRNWPLIAPLPSYGRGRELPGGRYISFIHGDGVRDVIIT 156
Query: 118 G-GGTFDGQGATWWAKYSDDS---DRPSALRFHSCKNLALSATNHINSPRNHXXXXXXXX 173
G GT DGQG WW + + RP+ + F + +N+ +S NSP +
Sbjct: 157 GENGTIDGQGDVWWNMWRQRTLQFTRPNLVEFLNSRNIIISNVIFKNSPFWNIHPVYCSN 216
Query: 174 XXXXXXHVTAPEESPNTDGIDISGSTNILIKDSTIRTG 211
+ AP +SPNTDGID S+N+ I+DS I TG
Sbjct: 217 VVVRYVTILAPRDSPNTDGIDPDSSSNVCIEDSYISTG 254
>Medtr1g100060.1 | pectin lyase superfamily protein | HC |
chr1:45084624-45082095 | 20130731
Length = 516
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 89/207 (42%), Gaps = 16/207 (7%)
Query: 20 IVNYGAKGDGQTDNSQAFVKAWNDMCA-ATQGAPTLLIPKGK----SFMLQPVSFKGPCK 74
+ ++G GDG+T N++AF A ++ A G L++P GK SF L F +
Sbjct: 95 LTDFGGVGDGKTLNTKAFNSAITNLSQYANDGGAQLIVPPGKWLTGSFNLTS-HFTLFLQ 153
Query: 75 SNNVNIELQGTLVAPKSVVAWKWANNNKGAWIDFSG-------INGLVIRGGGTFDGQGA 127
+ V + Q P+ + + FS I+ ++ GT DGQG+
Sbjct: 154 KDAVILASQYESDWPQLPALPSYGRGREKPGGRFSSLIFGTNLIDVIITGNNGTIDGQGS 213
Query: 128 TWWAKYSDDS---DRPSALRFHSCKNLALSATNHINSPRNHXXXXXXXXXXXXXXHVTAP 184
TWW K+ RP + + +S +NSP + AP
Sbjct: 214 TWWDKFQKKQLKITRPYMIEIMYSDQIQISNLTLVNSPSWFVHPVYSSNIIINGLTILAP 273
Query: 185 EESPNTDGIDISGSTNILIKDSTIRTG 211
+ PNTDGID STN+LI+D+ I +G
Sbjct: 274 VDVPNTDGIDPDSSTNVLIEDNYIVSG 300
>Medtr5g097860.1 | polygalacturonase | HC | chr5:42842979-42844751 |
20130731
Length = 343
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 93/202 (46%), Gaps = 18/202 (8%)
Query: 18 FNIVNYGAKGDGQTDNSQAFVKAWNDMCAATQGAPTLLIPKGKSFMLQPVSFKGPCKSNN 77
F+I ++G G D + AF AW C +T A ++IP+G + + V KGPCK+
Sbjct: 25 FDIKSFG--GASNADITMAFTNAWKAACGSTT-ASKVIIPRG-IYKIHAVDVKGPCKAP- 79
Query: 78 VNIELQGTLVAPKSVVAWKWANNNKGAWIDFSGINGLVIRGGGTFDGQGATWWAKYSDDS 137
+ +++ GT+ A ++ N+ W+ F ++ + G G FDG G T W + +D
Sbjct: 80 IEVQVDGTIQASQNP---DELNDASYQWVKFGYVDYFTLSGKGVFDGNGETAWTQ--NDC 134
Query: 138 DRPSALRFHSCKN----LALSATNHI---NSPRNHXXXXXXXXXXXXXXHVTAPEESPNT 190
+ S + S L LS I +S H +TAP S NT
Sbjct: 135 GKNSTCKRRSMNFGFNFLKLSIVQDIISKDSKNFHVNVLGCTNFTFDGLTITAPATSKNT 194
Query: 191 DGIDISGST-NILIKDSTIRTG 211
DGI I ST ++ + ++ I TG
Sbjct: 195 DGIHIGRSTDDVKVLNTNISTG 216
>Medtr1g100050.1 | pectin lyase superfamily protein | HC |
chr1:45079785-45077811 | 20130731
Length = 473
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 90/207 (43%), Gaps = 16/207 (7%)
Query: 20 IVNYGAKGDGQTDNSQAFVKAWNDMCA-ATQGAPTLLIPKGK----SFMLQPVSFKGPCK 74
+ ++GA GDG+T N++AF A ++ A G L++P GK SF L F +
Sbjct: 52 LTDFGAVGDGKTLNTKAFNAAITNLSQYANDGGAQLIVPPGKWLTGSFNLTS-HFTLFLQ 110
Query: 75 SNNVNIELQGTLVAPKSVVAWKWANNNKGAWIDFSGI------NGLVIRG-GGTFDGQGA 127
+ V + Q P+ +V + FS + ++I G GT DGQG+
Sbjct: 111 KDAVILGSQDESEWPQLLVLPSYGRGRDAPAGRFSSLIFGTNLTDVIITGDNGTIDGQGS 170
Query: 128 TWWAKYSDDS---DRPSALRFHSCKNLALSATNHINSPRNHXXXXXXXXXXXXXXHVTAP 184
WW K+ RP + + +S INSP + AP
Sbjct: 171 YWWDKFHKKQLTLTRPYMIEIMYSDQIQISNLTLINSPTWFVHPIYSSNIIINGLTILAP 230
Query: 185 EESPNTDGIDISGSTNILIKDSTIRTG 211
+SPNTDGI+ TN+ I+D+ I +G
Sbjct: 231 VDSPNTDGINPDSCTNVRIEDNFIVSG 257
>Medtr7g088550.1 | pectin lyase superfamily protein | HC |
chr7:34506744-34504347 | 20130731
Length = 476
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 87/207 (42%), Gaps = 16/207 (7%)
Query: 20 IVNYGAKGDGQTDNSQAFVKAWNDMCA-ATQGAPTLLIPKGK----SFMLQPVSFKGPCK 74
+ ++G GDG+T N++AF A + A G L++P GK SF L F +
Sbjct: 52 LTDFGGVGDGKTSNTKAFNTAITKLSQYANDGGAQLIVPPGKWLTGSFNLTS-HFTLFLQ 110
Query: 75 SNNVNIELQGTLVAPKSVVAWKWANNNKGAWIDFSGI------NGLVIRGG-GTFDGQGA 127
V + Q P+ + FS + ++I G GT DGQG+
Sbjct: 111 KGAVILGSQDESQWPQLPPLPSYGRGRDAPGPRFSSLIFGTHLTDVIITGNNGTIDGQGS 170
Query: 128 TWWAKYSDDS---DRPSALRFHSCKNLALSATNHINSPRNHXXXXXXXXXXXXXXHVTAP 184
WW K+ + RP + + +S INSP + AP
Sbjct: 171 YWWDKFHNKQLKITRPYMIEILYSDQIQISNLTLINSPSWFVHPTYSSNIIIKGLTILAP 230
Query: 185 EESPNTDGIDISGSTNILIKDSTIRTG 211
+SPNTDGID STN+ I+D+ I +G
Sbjct: 231 VDSPNTDGIDPDSSTNVRIEDNYIVSG 257
>Medtr1g100040.1 | pectin lyase superfamily protein | HC |
chr1:45076650-45074575 | 20130731
Length = 481
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 90/207 (43%), Gaps = 16/207 (7%)
Query: 20 IVNYGAKGDGQTDNSQAFVKAWNDMCA-ATQGAPTLLIPKGK----SFMLQPVSFKGPCK 74
+ ++G GDG+T N++AF A ++ A G L++P GK SF L F +
Sbjct: 58 LTDFGGVGDGKTLNTKAFNSAITNLSQYANDGGAQLIVPPGKWLTGSFNLTS-HFTLFLQ 116
Query: 75 SNNVNIELQGTLVAPKSVVAWKWANNNKGAWIDFSGI------NGLVIRGG-GTFDGQGA 127
++V + Q P+ V + + + FS + ++I G GT DGQG+
Sbjct: 117 KDSVILASQDESEWPQFPVLPSYGSGRNASDGRFSSLVFGTNLTDVIITGNNGTIDGQGS 176
Query: 128 TWWAKYSDDS---DRPSALRFHSCKNLALSATNHINSPRNHXXXXXXXXXXXXXXHVTAP 184
WW K+ RP + + +S INSP + AP
Sbjct: 177 YWWDKFHKGQMKITRPYMIEIMYSDQIQISNLTLINSPSWFVHPVYSSNIIINGLTILAP 236
Query: 185 EESPNTDGIDISGSTNILIKDSTIRTG 211
+ PNTDGID TN+ I+D+ I +G
Sbjct: 237 VDIPNTDGIDPDSCTNVRIEDNYIVSG 263
>Medtr2g100040.1 | polygalacturonase | LC | chr2:42942787-42944494 |
20130731
Length = 365
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 84/197 (42%), Gaps = 14/197 (7%)
Query: 1 MLLILYARVTPNAGSSNFNIVNYGAKGDGQTDNSQAFVKAWNDMCAATQGAPTLLIPKGK 60
+L+L + + S ++ + G+ ++A + W + CA+T + +LIPKG
Sbjct: 8 FVLLLLMASSSRSQSVVLDVTKHATISVGEI--TEALIATWKEACASTSSSK-ILIPKG- 63
Query: 61 SFMLQPVSFKGPCKSNNVNIELQGTLVAPKSVVAWKWANNNKGAWIDFSGINGLVIRGGG 120
++ L+ V+ +GPC + + I++ GT+ AP + + K WI F + + G G
Sbjct: 64 TYKLKQVNLRGPCNAP-IEIQVDGTIEAPADLTQL----DGKYQWIIFGYFDFFTLSGVG 118
Query: 121 TFDGQGATWWAKYSDDSDRPSALR-----FHSCKNLALSATNHINSPRNHXXXXXXXXXX 175
TFDG G W + ++ + F+ N + +S H
Sbjct: 119 TFDGLGEVAWKQNGCGKNKNCNMLSMNFGFYFLNNSIIKGITSKDSKYFHVNVFGCKNLT 178
Query: 176 XXXXHVTAPEESPNTDG 192
TAP SPN DG
Sbjct: 179 FMDFSATAPATSPNRDG 195
>Medtr7g078680.1 | polygalacturonase/glycoside hydrolase family
protein | HC | chr7:29762570-29765948 | 20130731
Length = 483
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 94/222 (42%), Gaps = 30/222 (13%)
Query: 12 NAGSSNFNIVNYGAKGDGQTDNSQAFVKAWNDMCA-ATQGAPTLLIPKGK----SFMLQP 66
N + + ++ ++G GDG T N++AF A + + +QG L +P GK SF L
Sbjct: 49 NCRAHSASLTDFGGVGDGNTSNTKAFQSAISHLSQYGSQGGSQLYVPAGKWLTGSFSLT- 107
Query: 67 VSFKGPCKSNNVNIELQGTLVAPKSVVAWK----WANNNKG---------AWIDFSGING 113
+ ++ L+A + + W + +G + I + +
Sbjct: 108 -------SHFTLYLDRDAVLLASQDITEWPVLEPLPSYGRGRDAPAGRFRSLIFGTNLTD 160
Query: 114 LVIRGG-GTFDGQGATWWAKYSDDS---DRPSALRFHSCKNLALSATNHINSPRNHXXXX 169
+++ GG GT DGQGA WW ++ RP + ++ +S +NSP +
Sbjct: 161 VIVTGGNGTIDGQGAFWWQQFHRKKLKYTRPYLIELMFSDSIQISNLTLLNSPSWNVHPV 220
Query: 170 XXXXXXXXXXHVTAPEESPNTDGIDISGSTNILIKDSTIRTG 211
+ AP SPNTDGI+ TN I+D I +G
Sbjct: 221 YSSNIIIQGITIIAPISSPNTDGINPDSCTNTKIEDCYIVSG 262
>Medtr8g028725.1 | polygalacturonase/glycoside hydrolase family
protein | HC | chr8:11065754-11061041 | 20130731
Length = 479
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 93/222 (41%), Gaps = 30/222 (13%)
Query: 12 NAGSSNFNIVNYGAKGDGQTDNSQAFVKAWNDMCA-ATQGAPTLLIPKGK----SFMLQP 66
N + + ++ ++G GDG+T N++AF A + + A++G L +P GK SF L
Sbjct: 49 NCRAHSVSLKDFGGVGDGKTSNTKAFKSAISHLSQNASEGGSQLYVPAGKWLTGSFSL-- 106
Query: 67 VSFKGPCKSNNVNIELQGTLVAPKSVVAW-------------KWANNNKGAWIDFSGING 113
+ + L+A + + W A + I + +
Sbjct: 107 ------ISHFTLYLHKDAVLLASQDINEWPVIKPLPSYGRGRDAAAGRHTSLIFGTNLTD 160
Query: 114 LVIRG-GGTFDGQGATWWAKYSDDS---DRPSALRFHSCKNLALSATNHINSPRNHXXXX 169
+++ G GT DGQG+ WW ++ + RP + N+ +S ++SP +
Sbjct: 161 VIVTGDNGTIDGQGSFWWQQFHNKKLKYTRPYLIELMFSDNIQISNLTLLDSPSWNIHPV 220
Query: 170 XXXXXXXXXXHVTAPEESPNTDGIDISGSTNILIKDSTIRTG 211
+ AP SPNTDGI+ TN I+D I +G
Sbjct: 221 YSSNIIIKGITIIAPIRSPNTDGINPDSCTNTKIEDCYIVSG 262
>Medtr8g098840.1 | polygalacturonase/glycoside hydrolase family
protein | HC | chr8:41331762-41334923 | 20130731
Length = 470
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 95/221 (42%), Gaps = 18/221 (8%)
Query: 6 YARVTPNAGSSNFNIVNYGAKGDGQTDNSQAFVKAWNDMCA-ATQGAPTLLIPKGK---- 60
Y V+ A S++ + +GA GDG T N++AF A + + ++ G L +P G+
Sbjct: 34 YCAVSCRAYSAS--VTEFGAAGDGNTLNTKAFQSAIDHLSQYSSNGGSQLYVPPGRWLTG 91
Query: 61 SFMLQPVSFKGPCKSNNVNIELQGTLVAP--KSVVAWKWANNNKG----AWIDFSGINGL 114
SF L F + V + Q P + ++ + +G + I + + +
Sbjct: 92 SFNLTS-HFTLFLHKDAVILGSQDESEWPVIDPLPSYGRGRDTQGGRYSSLIFGTNLTDV 150
Query: 115 VIRGG-GTFDGQGATWWAKYSDDS---DRPSALRFHSCKNLALSATNHINSPRNHXXXXX 170
VI G GT DGQG WW K+ RP + N+ +S +NSP +
Sbjct: 151 VITGNNGTLDGQGELWWQKFHKGKLTYTRPYLIEIMYSDNIQISNLTLVNSPSWNVHPVY 210
Query: 171 XXXXXXXXXHVTAPEESPNTDGIDISGSTNILIKDSTIRTG 211
+ AP SPNTDGI+ TN I+D I +G
Sbjct: 211 SSNIIVQGITILAPVNSPNTDGINPDSCTNTRIEDCYIVSG 251
>Medtr1g086030.1 | polygalacturonase/glycoside hydrolase family
protein | HC | chr1:38488435-38484789 | 20130731
Length = 510
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 87/217 (40%), Gaps = 34/217 (15%)
Query: 19 NIVNYGAKGDGQTDNSQAFVKAWNDM-CAATQGAPTLLIPKGK----SFMLQPVSFKGPC 73
+I +GA GDG T N++AF A + A +G L +P G+ SF L
Sbjct: 83 SITEFGAVGDGITLNTKAFQNAIFYLNSYADKGGAKLFVPAGRWLTGSFDLI-------- 134
Query: 74 KSNNVNIELQGTLVAPKSVVAWKWA---------------NNNKGAWIDFSGINGLVIRG 118
+++ + L V S + W + I + ++I G
Sbjct: 135 --SHLTLWLDKDAVILGSTNSEDWPVVDPLPSYGRGRELPGGRHRSLIYGCNLTDVIITG 192
Query: 119 G-GTFDGQGATWWAKYSD---DSDRPSALRFHSCKNLALSATNHINSPRNHXXXXXXXXX 174
GT DGQG+ WW+K+ + D RP + + + +S +NSP
Sbjct: 193 NNGTIDGQGSIWWSKFRNKTLDHTRPHLVELINSTEVLISNATFLNSPFWTIHPVYCSNV 252
Query: 175 XXXXXHVTAPEESPNTDGIDISGSTNILIKDSTIRTG 211
+ P SPNTDGID S N+ I+D I TG
Sbjct: 253 TVQNVTIIVPFGSPNTDGIDPDSSDNVCIEDCYISTG 289
>Medtr4g120730.1 | polygalacturonase/glycoside hydrolase family
protein | HC | chr4:49981535-49985560 | 20130731
Length = 459
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 97/213 (45%), Gaps = 26/213 (12%)
Query: 19 NIVNYGAKGDGQTDNSQAFVKAWNDMCA-ATQGAPTLLIPKGKSFMLQPVSFKGPCKSNN 77
+I+ +GA GDG+T N+ AF A + + A +G L +P G +++ Q + +++
Sbjct: 41 SILEFGAVGDGKTLNTIAFQNAIFYLKSFADKGGAQLYVPPG-TWLTQSFNL-----TSH 94
Query: 78 VNIELQGTLVAPKSVVAWKW----ANNNKGAWIDFSG------ING-----LVIRGG-GT 121
+ + L+ V S + W + G ++ G ING +VI G GT
Sbjct: 95 LTLFLEKGAVIIGSQDHYNWDVLDPLPSYGRGLEVPGGRYQSLINGYMLQDVVITGNNGT 154
Query: 122 FDGQGATWWAKYSDDS---DRPSALRFHSCKNLALSATNHINSPRNHXXXXXXXXXXXXX 178
DG G+TWW +S S RP + + ++ +S +N+P +
Sbjct: 155 IDGMGSTWWESFSSHSLNYSRPHLVELVASTDVVVSNLTFLNAPAYNIHPVYCRNVHIHN 214
Query: 179 XHVTAPEESPNTDGIDISGSTNILIKDSTIRTG 211
+ AP ESP T GI S ++ I+D TI TG
Sbjct: 215 ISIFAPPESPYTVGIVPDSSDHVCIEDCTIATG 247
>Medtr3g096330.1 | glycoside hydrolase family 28 protein | HC |
chr3:44026955-44022720 | 20130731
Length = 775
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 90/217 (41%), Gaps = 34/217 (15%)
Query: 19 NIVNYGAKGDGQTDNSQAFVKAWNDMCAAT-QGAPTLLIPKGK----SFMLQPVSFKGPC 73
+IV++G GDG+T N+Q+F +A M +G L IP G SF L
Sbjct: 77 SIVDFGGVGDGKTSNTQSFQRAIRYMQRFRGKGGSQLNIPNGTWLTGSFNL--------- 127
Query: 74 KSNNVNIELQGTLVAPKSVVAWKW---------------ANNNKGAWIDFSGINGLVIRG 118
+++ + L V S +W + I +G+ +VI G
Sbjct: 128 -TSDFTLFLHHGAVVLGSQDIKEWPIIEPLPSYGRGRERLGGRHISLIHANGVRNVVITG 186
Query: 119 -GGTFDGQGATWWAKYSDDS---DRPSALRFHSCKNLALSATNHINSPRNHXXXXXXXXX 174
GT DGQG WW + + + R L + +N+ +S NSP
Sbjct: 187 ENGTVDGQGRMWWELWWNRTLVHTRGHLLELMNSENVLVSNLTFRNSPFWTIHPVYCSNV 246
Query: 175 XXXXXHVTAPEESPNTDGIDISGSTNILIKDSTIRTG 211
+ AP +PNTDGID STN+ I+D+ I +G
Sbjct: 247 VIKGMTILAPLNAPNTDGIDPDSSTNVCIEDNYIESG 283
>Medtr1g086030.2 | polygalacturonase/glycoside hydrolase family
protein | HC | chr1:38486723-38484669 | 20130731
Length = 406
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 44/95 (46%), Gaps = 3/95 (3%)
Query: 120 GTFDGQGATWWAKYSD---DSDRPSALRFHSCKNLALSATNHINSPRNHXXXXXXXXXXX 176
GT DGQG+ WW+K+ + D RP + + + +S +NSP
Sbjct: 91 GTIDGQGSIWWSKFRNKTLDHTRPHLVELINSTEVLISNATFLNSPFWTIHPVYCSNVTV 150
Query: 177 XXXHVTAPEESPNTDGIDISGSTNILIKDSTIRTG 211
+ P SPNTDGID S N+ I+D I TG
Sbjct: 151 QNVTIIVPFGSPNTDGIDPDSSDNVCIEDCYISTG 185
>Medtr7g110710.1 | polygalacturonase/glycoside hydrolase family
protein | HC | chr7:45367344-45371719 | 20130731
Length = 466
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 94/218 (43%), Gaps = 18/218 (8%)
Query: 8 RVTPNAGSSNFNIVNYGAKGDGQTDNSQAFVKAWNDMCA-ATQGAPTLLIPKGK----SF 62
+V P++ S I +GA GDG T N++AF A + + + +G L +P G+ SF
Sbjct: 37 KVRPHSVS----ITEFGAVGDGITLNTKAFQNAIFYLNSFSDKGGAKLFVPAGRWLTGSF 92
Query: 63 -MLQPVSF---KGPCKSNNVNIELQGTL-VAPKSVVAWKWANNNKGAWIDFSGINGLVIR 117
++ ++ K + N E + P + + I + ++I
Sbjct: 93 DLISHLTLWLDKDAIILGSTNSEDWPVVDPLPSYGRGRELPGGRHRSLIYGCNLTDVIIT 152
Query: 118 GG-GTFDGQGATWWAKYSD---DSDRPSALRFHSCKNLALSATNHINSPRNHXXXXXXXX 173
G G DGQG+ WW+ + + D RP + + + +S +NSP
Sbjct: 153 GNEGIIDGQGSIWWSMFRNKTLDYTRPHLVELMNSTRVLISNLTFLNSPFWTIHPVYCSQ 212
Query: 174 XXXXXXHVTAPEESPNTDGIDISGSTNILIKDSTIRTG 211
+ AP +SPNTDGID S ++ I+D I TG
Sbjct: 213 VTVQNVTILAPLDSPNTDGIDPDSSDDVCIEDCYISTG 250
>Medtr7g110710.2 | polygalacturonase/glycoside hydrolase family
protein | HC | chr7:45367344-45371719 | 20130731
Length = 466
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 94/218 (43%), Gaps = 18/218 (8%)
Query: 8 RVTPNAGSSNFNIVNYGAKGDGQTDNSQAFVKAWNDMCA-ATQGAPTLLIPKGK----SF 62
+V P++ S I +GA GDG T N++AF A + + + +G L +P G+ SF
Sbjct: 37 KVRPHSVS----ITEFGAVGDGITLNTKAFQNAIFYLNSFSDKGGAKLFVPAGRWLTGSF 92
Query: 63 -MLQPVSF---KGPCKSNNVNIELQGTL-VAPKSVVAWKWANNNKGAWIDFSGINGLVIR 117
++ ++ K + N E + P + + I + ++I
Sbjct: 93 DLISHLTLWLDKDAIILGSTNSEDWPVVDPLPSYGRGRELPGGRHRSLIYGCNLTDVIIT 152
Query: 118 GG-GTFDGQGATWWAKYSD---DSDRPSALRFHSCKNLALSATNHINSPRNHXXXXXXXX 173
G G DGQG+ WW+ + + D RP + + + +S +NSP
Sbjct: 153 GNEGIIDGQGSIWWSMFRNKTLDYTRPHLVELMNSTRVLISNLTFLNSPFWTIHPVYCSQ 212
Query: 174 XXXXXXHVTAPEESPNTDGIDISGSTNILIKDSTIRTG 211
+ AP +SPNTDGID S ++ I+D I TG
Sbjct: 213 VTVQNVTILAPLDSPNTDGIDPDSSDDVCIEDCYISTG 250
>Medtr8g031180.1 | polygalacturonase | LC | chr8:11659557-11657369 |
20130731
Length = 281
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 58/133 (43%), Gaps = 25/133 (18%)
Query: 81 ELQGTLVAPKSVVAWKWANNNKGAWIDFSGINGLVIRGGGTFDGQG--ATWWAKYSDDSD 138
ELQG +VAP K A + WI +NG+ I G G G +TWW
Sbjct: 15 ELQGKVVAPS-----KEALKDDEHWIKIQYVNGVTIDGTGGGGIDGNGSTWWP------- 62
Query: 139 RPSALRFHSCKNLALSATNHINSPRNHXXXXXXXXXXXXXXHVTAPEESPNTDGIDISGS 198
CK + S NSP+ H + +P SPNTDG DIS S
Sbjct: 63 ---------CK--SCSRPRFTNSPKQHITLSDCNGAKFSNIDIQSPSYSPNTDGFDISTS 111
Query: 199 TNILIKDSTIRTG 211
N+ I+DSTI++G
Sbjct: 112 KNVSIEDSTIQSG 124
>Medtr2g435340.1 | polygalacturonase/glycoside hydrolase family
protein | HC | chr2:13610605-13606670 | 20130731
Length = 452
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 85/218 (38%), Gaps = 34/218 (15%)
Query: 19 NIVNYGAKGDGQTDNSQAFVKAWNDMCA-ATQGAPTLLIPKGK----SFMLQPVSFKGPC 73
+I+ +GA GDG+T N+ AF A + + A +G L +P G SF L
Sbjct: 38 SILEFGAVGDGKTLNTIAFQNAIFYLKSFADKGGAQLYVPPGNWLTGSFNL--------- 88
Query: 74 KSNNVNIELQGTLVAPKSVVAWKW---------------ANNNKGAWIDFSGINGLVIRG 118
++++ + L+ V S W + + I+ + + +VI G
Sbjct: 89 -TSHLTLFLEKGAVIIGSQDPSHWNIIEALPSYGRGKDVPDGRYKSLINGNQLEDVVITG 147
Query: 119 G-GTFDGQGATWWAKYSDDS---DRPSALRFHSCKNLALSATNHINSPRNHXXXXXXXXX 174
GT DG G WW Y S RP + S + +S +N+P
Sbjct: 148 NNGTIDGNGMVWWDSYKSHSLNHSRPHLVEIISSDFVVVSNLTFLNAPAYSIHPVYCSNV 207
Query: 175 XXXXXHVTAPEESPNTDGIDISGSTNILIKDSTIRTGI 212
++ P ESP T GI S N+ I+D + G
Sbjct: 208 HIQNISISTPPESPYTAGIVPDSSNNVCIEDCFVSIGF 245