Miyakogusa Predicted Gene

Lj1g3v1123960.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1123960.1 Non Characterized Hit- tr|A5B7T3|A5B7T3_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,55.56,2e-16,seg,NULL,gene.g30865.t1.1
         (181 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g067740.1 | hypothetical protein | HC | chr5:28631038-2863...   114   6e-26

>Medtr5g067740.1 | hypothetical protein | HC |
           chr5:28631038-28630150 | 20130731
          Length = 150

 Score =  114 bits (284), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 56/94 (59%), Positives = 65/94 (69%)

Query: 75  QNHASCLVARCASSRLVTELERDLKLXXXXXXXXATGIARYKHKCGEGKGAVELLECLER 134
           Q   S  V  CAS  LV E +R+L+          +GI RY+ KCGE +G VELLECLE+
Sbjct: 52  QKGKSEFVVGCASWGLVNEFKRELEEGETNDEKGKSGITRYREKCGEREGVVELLECLEK 111

Query: 135 EAIMGADIGKEPTDYNRRAQIFDRSSAVFQALRE 168
           EAIMG D GKEP DYNRRAQIFD+SS VFQAL+E
Sbjct: 112 EAIMGDDEGKEPNDYNRRAQIFDKSSQVFQALKE 145