Miyakogusa Predicted Gene
- Lj1g3v1112820.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v1112820.2 Non Characterized Hit- tr|G7K644|G7K644_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,45.24,0.000000000001,no description,NULL; seg,NULL; C2
domain (Calcium/lipid-binding domain, CaLB),C2
calcium/lipid-bindi,CUFF.26842.2
(316 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr3g093560.1 | calcium-dependent lipid-binding (CaLB domain) ... 355 2e-98
Medtr5g068530.1 | C2 domain protein | HC | chr5:29013902-2901043... 268 4e-72
Medtr5g068530.2 | C2 domain protein | HC | chr5:29013902-2901048... 254 6e-68
Medtr5g069320.1 | Pmr5/Cas1p GDSL/SGNH-like acyl-esterase family... 198 6e-51
Medtr5g068540.1 | RNA recognition motif, a.k.a. RRM, RBD protein... 67 2e-11
Medtr7g115480.1 | calcium-dependent lipid-binding (CaLB domain) ... 55 6e-08
Medtr6g045643.1 | C2 domain protein | HC | chr6:16538562-1653728... 55 8e-08
Medtr1g073210.1 | calcium-dependent lipid-binding (CaLB domain) ... 55 1e-07
Medtr3g070165.1 | C2 domain protein | HC | chr3:31429391-3143093... 55 1e-07
Medtr1g080360.1 | calcium-dependent lipid-binding (CaLB domain) ... 54 3e-07
Medtr1g045780.1 | calcium-dependent lipid-binding (CaLB domain) ... 53 4e-07
>Medtr3g093560.1 | calcium-dependent lipid-binding (CaLB domain)
family protein, putative | HC | chr3:42749804-42751253 |
20130731
Length = 310
Score = 355 bits (912), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 190/311 (61%), Positives = 213/311 (68%), Gaps = 16/311 (5%)
Query: 1 MGITWIEVCLISAHGLQHSTSLWKRQWYAVGWIDHDSKYCTKVDDSGNANPVWKTKFAIP 60
MGI W+E CLISAHGLQHSTSLWKR WYAVGWID +SKYCTK+DDSGNANPVW+T FA+P
Sbjct: 1 MGIIWVEFCLISAHGLQHSTSLWKRHWYAVGWIDDNSKYCTKIDDSGNANPVWRTNFAVP 60
Query: 61 VDDSEQNIQDLALNVEVYGIDPVFFTEKLHGSATIVLKEFLVKQAENFE----RQGEVGS 116
VDDS N+QDL LNVEVY IDP+FF EKLHGS T+ LK FL KQ +N E +Q V S
Sbjct: 61 VDDSMPNLQDLTLNVEVYSIDPIFFKEKLHGSTTVGLKNFLDKQMKNSEMSMPKQDGVRS 120
Query: 117 YQLRKRNSSKPRGFIDILIHISEGKIDPNSHTGSKEGIMLLDHGDNTKLSEEGELRQAYP 176
YQL KR SSKP+GFIDILIHIS+ + +P SHTGSKEG LLD+GDNT + E LRQAYP
Sbjct: 121 YQLWKRKSSKPKGFIDILIHISDDEKEPGSHTGSKEGKGLLDYGDNTHRTAEEGLRQAYP 180
Query: 177 QKQPQASIHELESHVQTNIQDSCSEPFNSTIYYDPYVGE--------PSYLPGRTKTRTA 228
QKQP SIH+ E H TN+ DS S PF TIY D Y+GE PSY P RT T
Sbjct: 181 QKQPPDSIHQAEDHKNTNVLDSYSVPFTPTIYSDQYLGEPSYHAAAGPSYQPHRTVTPPP 240
Query: 229 XXXXXXSNVGYIPTFLPINDFLHPSFPDMPLSSRAAPSQRVPPXXXXXXXXXXXXXXXXX 288
SNVGYIPTFLP + L PSF ++P S P Q VPP
Sbjct: 241 ---SPPSNVGYIPTFLPRSYGLPPSFTNIP-PSMEEPGQTVPPDVVLEISTEALAAGTAI 296
Query: 289 FGDDFLLGYDV 299
FGDDFL G+DV
Sbjct: 297 FGDDFLSGFDV 307
>Medtr5g068530.1 | C2 domain protein | HC | chr5:29013902-29010432 |
20130731
Length = 358
Score = 268 bits (686), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 149/304 (49%), Positives = 188/304 (61%), Gaps = 16/304 (5%)
Query: 5 WIEVCLISAHGLQHSTSLWKRQWYAVGWIDHDSKYCTKVDDSGNANPVWKTKFAIPVDDS 64
W+E+C+ISA G++ S SLWKRQWYA+GW+D +KY TKVD S N NP+W+TKF+I VD+S
Sbjct: 44 WVEICIISARGVRASHSLWKRQWYAIGWVDPTNKYITKVDASTNTNPLWRTKFSIQVDNS 103
Query: 65 EQNIQDLALNVEVYGIDPVFFTEKLHGSATIVLKEFLVKQAENFE--RQG--EVGSYQLR 120
+ N DLALNVEVY DP FFTEKLHGSAT++LKEFL K N E RQG EVGSYQLR
Sbjct: 104 DPNFHDLALNVEVYSRDPFFFTEKLHGSATVLLKEFLAKGLLNDEGLRQGSEEVGSYQLR 163
Query: 121 KRNSSKPRGFIDILIHISEGKIDPNSHTGSKEGIMLLDHGDNTKLSEEGELRQAYPQKQP 180
K+ S KP GF+D+ + +SE +PNSH+G+ GI LLD+G+ +G Q Y Q+
Sbjct: 164 KKKSGKPSGFVDVSVRVSEDNEEPNSHSGNGGGIELLDNGN------KGRFGQGYHQQMD 217
Query: 181 QASIHELESHVQTNIQDSCSEPFNSTIYYDPYVGEPSYLPGRT----KTRTAXXXXXXSN 236
AS + QTN+ S P+ T Y +PYVG PSY P + + SN
Sbjct: 218 PASFNGPHKQAQTNVPYSHPVPY-PTNYSNPYVGGPSY-PAASGPSYQPPRTPPPPPTSN 275
Query: 237 VGYIPTFLPINDFLHPSFPDMPLSSRAAPSQRVPPXXXXXXXXXXXXXXXXXFGDDFLLG 296
VGY P F N+ L S+ +MP SS AP QR PP FGD+F+ G
Sbjct: 276 VGYPPNFHQSNNGLASSYFNMPSSSGTAPRQRGPPGFAMGAGAGALAAGAVMFGDNFMSG 335
Query: 297 YDVP 300
+DVP
Sbjct: 336 FDVP 339
>Medtr5g068530.2 | C2 domain protein | HC | chr5:29013902-29010483 |
20130731
Length = 334
Score = 254 bits (650), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 142/279 (50%), Positives = 178/279 (63%), Gaps = 16/279 (5%)
Query: 1 MGITWIEVCLISAHGLQHSTSLWKRQWYAVGWIDHDSKYCTKVDDSGNANPVWKTKFAIP 60
M W+E+C+ISA G++ S SLWKRQWYA+GW+D +KY TKVD S N NP+W+TKF+I
Sbjct: 40 MVKIWVEICIISARGVRASHSLWKRQWYAIGWVDPTNKYITKVDASTNTNPLWRTKFSIQ 99
Query: 61 VDDSEQNIQDLALNVEVYGIDPVFFTEKLHGSATIVLKEFLVKQAENFE--RQG--EVGS 116
VD+S+ N DLALNVEVY DP FFTEKLHGSAT++LKEFL K N E RQG EVGS
Sbjct: 100 VDNSDPNFHDLALNVEVYSRDPFFFTEKLHGSATVLLKEFLAKGLLNDEGLRQGSEEVGS 159
Query: 117 YQLRKRNSSKPRGFIDILIHISEGKIDPNSHTGSKEGIMLLDHGDNTKLSEEGELRQAYP 176
YQLRK+ S KP GF+D+ + +SE +PNSH+G+ GI LLD+G+ +G Q Y
Sbjct: 160 YQLRKKKSGKPSGFVDVSVRVSEDNEEPNSHSGNGGGIELLDNGN------KGRFGQGYH 213
Query: 177 QKQPQASIHELESHVQTNIQDSCSEPFNSTIYYDPYVGEPSYLPGRT----KTRTAXXXX 232
Q+ AS + QTN+ S P+ T Y +PYVG PSY P + +
Sbjct: 214 QQMDPASFNGPHKQAQTNVPYSHPVPY-PTNYSNPYVGGPSY-PAASGPSYQPPRTPPPP 271
Query: 233 XXSNVGYIPTFLPINDFLHPSFPDMPLSSRAAPSQRVPP 271
SNVGY P F N+ L S+ +MP SS AP QR PP
Sbjct: 272 PTSNVGYPPNFHQSNNGLASSYFNMPSSSGTAPRQRGPP 310
>Medtr5g069320.1 | Pmr5/Cas1p GDSL/SGNH-like acyl-esterase family
protein | HC | chr5:29366510-29362347 | 20130731
Length = 386
Score = 198 bits (503), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 95/149 (63%), Positives = 116/149 (77%), Gaps = 4/149 (2%)
Query: 5 WIEVCLISAHGLQHSTSLWKRQWYAVGWIDHDSKYCTKVDDSGNANPVWKTKFAIPVDDS 64
W+E+CLISA G++ S SLWKRQWYA+GW+D +KY TKVD S N NP+W+TKF+I VD+S
Sbjct: 5 WVEICLISARGVRASHSLWKRQWYAIGWVDPTNKYITKVDASTNTNPLWRTKFSIQVDNS 64
Query: 65 EQNIQDLALNVEVYGIDPVFFTEKLHGSATIVLKEFLVKQAENFE--RQG--EVGSYQLR 120
+ N DLALNVEVY DP FFTEKLHGSAT++LKEFL K N E RQG EVGSYQLR
Sbjct: 65 DPNFHDLALNVEVYSRDPFFFTEKLHGSATVLLKEFLAKGLLNDEGLRQGSEEVGSYQLR 124
Query: 121 KRNSSKPRGFIDILIHISEGKIDPNSHTG 149
K+ S KP GF+D+ + +SE K +PNSH+
Sbjct: 125 KKKSGKPSGFVDVSVRVSEDKEEPNSHSA 153
>Medtr5g068540.1 | RNA recognition motif, a.k.a. RRM, RBD protein |
LC | chr5:29018170-29014149 | 20130731
Length = 369
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/111 (40%), Positives = 54/111 (48%), Gaps = 2/111 (1%)
Query: 206 TIYYDPYVGEPSYLPGRTKTRTAXXXXXXSNVGYIPTFLPINDFLHPSFPDMPLSSRAAP 265
T Y +PYVG P+Y P + RT SNVGY+P F ND L PS+ +MP SS AP
Sbjct: 261 TNYSNPYVGGPNY-PAASGPRTPPPPPPPSNVGYVPNFHRSNDGLTPSYFNMPSSSGTAP 319
Query: 266 SQRVPPXXXXXXXXXXXXXXXXXFGDDFLLGYDVPEGIGDDSLDIETDHSF 316
QR PP F+ G+ VP G G+ SL I TD F
Sbjct: 320 RQRGPP-GFAIGAGAGAFVQLVLLCLVFISGFYVPSGFGNPSLTIGTDPLF 369
>Medtr7g115480.1 | calcium-dependent lipid-binding (CaLB domain)
family protein | HC | chr7:47725743-47724574 | 20130731
Length = 389
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 66/134 (49%), Gaps = 7/134 (5%)
Query: 6 IEVCLISAHGLQHSTSLWKRQWYAVGWIDHDSKYCTKVDDSGNANPVWKTKFAIPVDDSE 65
+E+ +ISA L K YAV W+ + K T++D G+ NP W KF VD+
Sbjct: 13 LEINIISAQDLSGVAKSVKA--YAVAWLHPERKLATQIDQVGHTNPTWNEKFVFRVDNEF 70
Query: 66 QNIQDLALNVEVYGIDPVFFTEKLHGSATIVLKEFL--VKQAENFERQGEVGSYQLRKRN 123
N + + +E+Y + + + L G+ +++ L V + N + + Q+R R
Sbjct: 71 LNSESSVIMIEIY--NSAWLRDILIGTVVVLVNNLLPTVTLSGNRKPKLRFVGLQIR-RP 127
Query: 124 SSKPRGFIDILIHI 137
S +P+G ++I + +
Sbjct: 128 SGRPQGILNIGVTL 141
>Medtr6g045643.1 | C2 domain protein | HC | chr6:16538562-16537288 |
20130731
Length = 301
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 66/138 (47%), Gaps = 15/138 (10%)
Query: 7 EVCLISAHGLQHSTSLWKR---QWYAVGWIDHDSKYCTKVDDSGNANPVWKTKFAIPVDD 63
EV L SA+ L++ W+ + Y V WID +K+ TKVD++G+ W IP+
Sbjct: 8 EVKLSSAYNLKNVN--WRNGSNKPYGVVWIDPKNKFSTKVDENGDTEANWDQTLIIPL-- 63
Query: 64 SEQNIQDLALNVEVYGIDPVFFTEKLHGSATIVLKEFL--VKQAENFERQGEVGSYQLRK 121
Q I+DL L +++ T+ L GSA + L E L V E R K
Sbjct: 64 PPQPIEDLTLYIDIVHAGSEPDTKPLIGSARLKLVEVLDDVGIGERASRS------LTLK 117
Query: 122 RNSSKPRGFIDILIHISE 139
R S +P G +D+ + I E
Sbjct: 118 RPSGRPHGKVDVKVIIRE 135
>Medtr1g073210.1 | calcium-dependent lipid-binding (CaLB domain)
family protein | HC | chr1:32485698-32483650 | 20130731
Length = 682
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 68/138 (49%), Gaps = 12/138 (8%)
Query: 6 IEVCLISAHGLQHSTSLWKR-QWYAVGWIDHDSKYCTKVDDSGNANPVWKTKFAIPVDDS 64
+E+ +ISA L SL + + YAV W+ D K T+VD G+ NP W KF VD+
Sbjct: 11 LELNVISAQDL---ASLGRNMRTYAVAWVHPDRKLSTRVDTQGHTNPTWNDKFVFRVDEE 67
Query: 65 EQNIQDLALNVEVYGIDPVFFTEKLHGSATIVLKEFLVKQAENFER-QGEVG----SYQL 119
A+ VEVY + +F + G+ +++ + F + +G + Q+
Sbjct: 68 FLYSDTSAIMVEVYALH--WFKDIHVGTVRVLVGNLIPPPTRPFHNDRAPMGMRFVALQV 125
Query: 120 RKRNSSKPRGFIDILIHI 137
R R S +P+G ++I + +
Sbjct: 126 R-RPSGRPQGILNIGVTV 142
>Medtr3g070165.1 | C2 domain protein | HC | chr3:31429391-31430935 |
20130731
Length = 317
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 65/135 (48%), Gaps = 14/135 (10%)
Query: 6 IEVCLISAHGLQHSTSLWKR---QWYAVGWIDHDSKYCTKVDDSGNANPVWKTKFAIPVD 62
+++ +ISA L++ WK + Y V W+D D + TK DDSGN +PVW +F +P+
Sbjct: 14 LDLTIISAKHLKNVN--WKTGDLKPYVVFWLDPDRRLATKSDDSGNTSPVWNERFTLPL- 70
Query: 63 DSEQNIQDLALNVEVYGIDPVFFTEKLHGSATIVLKEFLVKQAENFERQGEVGSYQLRKR 122
+QD L +E++ P + L + + LK+ ++ V R
Sbjct: 71 --SLPLQDSTLTLEIFHSKPSDTPKPLVATLRLPLKDLPDLHHSTIVKKFSV------VR 122
Query: 123 NSSKPRGFIDILIHI 137
S +P+G I + I +
Sbjct: 123 PSGRPQGKIHLKISL 137
>Medtr1g080360.1 | calcium-dependent lipid-binding (CaLB domain)
family protein | HC | chr1:35696313-35697440 | 20130731
Length = 375
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 68/137 (49%), Gaps = 8/137 (5%)
Query: 6 IEVCLISAHGLQHSTSLWKRQWYAVGWIDHDSKYCTKVDDSGNANPVWKTKFAIPVDDSE 65
+E+ +ISA L + K YAV W++ + K T+ D G+ NP W KF VDD
Sbjct: 11 LEINVISAQDLAPVSKSIKA--YAVAWLNPERKLTTQADPHGHNNPTWNEKFVFRVDDDF 68
Query: 66 QNIQDLALNVEVYGIDPVFFTEKLHGSATIVLKEFLVKQAENFERQGEVGSYQLRKRNSS 125
++ + +E+Y + + L G+ + L L + N + + + Q+R R S
Sbjct: 69 LLSEESVIMIEIYA--SAWLRDVLIGTVAVHLNNLLPR---NRKSKIRFVALQVR-RPSG 122
Query: 126 KPRGFIDILIHISEGKI 142
+P+G ++I +++ + +
Sbjct: 123 RPQGILNIGVNVVDATM 139
>Medtr1g045780.1 | calcium-dependent lipid-binding (CaLB domain)
family protein | HC | chr1:17223842-17222463 | 20130731
Length = 459
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 78/177 (44%), Gaps = 12/177 (6%)
Query: 6 IEVCLISAHGLQHSTSLWKRQWYAVGWIDHDSKYCTKVDDSGNANPVWKTKFAIPVDDSE 65
+E+ +ISA L + YAV W+D D K T+VD NP W KF VD+
Sbjct: 11 LELNVISAQDLAEVGRSMRT--YAVAWVDPDRKLSTRVDSQSGTNPAWNDKFVFRVDEDF 68
Query: 66 QNIQDLALNVEVYGIDPVFFTEKLHGSATIVLKEFL----VKQAENFERQGEVGSYQLRK 121
++ + +++Y I +F + G+A ++ + + + N++ QG
Sbjct: 69 LYDENSTITIDIYAIH--WFKDIHVGTAHVLADDIIPPSRPSHSNNYKPQGMQFVGLQVH 126
Query: 122 RNSSKPRGFIDILIHISEGKIDPN---SHTGS-KEGIMLLDHGDNTKLSEEGELRQA 174
R S +P+G +++ + + + + +H + G DH D ELR+A
Sbjct: 127 RPSGRPKGILNVGVAVIDSSMRSMPLYTHNNTPTAGYHQNDHHDQLSHEAMSELRRA 183