Miyakogusa Predicted Gene

Lj1g3v1079500.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1079500.1 Non Characterized Hit- tr|E1ZE57|E1ZE57_CHLVA
Putative uncharacterized protein OS=Chlorella
variabil,35.44,2e-17,seg,NULL,CUFF.26770.1
         (299 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g092810.1 | hypothetical protein | HC | chr3:42432715-4243...   386   e-107

>Medtr3g092810.1 | hypothetical protein | HC |
           chr3:42432715-42431012 | 20130731
          Length = 293

 Score =  386 bits (991), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 203/289 (70%), Positives = 226/289 (78%), Gaps = 8/289 (2%)

Query: 16  QPITNL--PSLPDLYLTTLSVCFLFTSSRSHHS---TSCPFPSLPLNRRRFLKIPAMSHS 70
           QP+TNL  PSLPDL LT LSVCFLFTSSRSH++   T+CPF S PL  RRFLKIPAMS++
Sbjct: 6   QPLTNLNLPSLPDLLLTALSVCFLFTSSRSHNTPTTTNCPFLSFPLKPRRFLKIPAMSNN 65

Query: 71  TTXXXXXXXXXXXXXXXXXXRHSFASPQSLSDWLKPRLPTDSFATWGVKPGTKNVHNLWL 130
            +                  R +F SPQSLS+WLKPRLP+DSFATWGVKPGTKNVHNLWL
Sbjct: 66  ISTSSLSSSSSSNPNRNN--RRNFVSPQSLSEWLKPRLPSDSFATWGVKPGTKNVHNLWL 123

Query: 131 EIAEGETSLEDSTPPIXXXXXXXXXXXGKDGKFLVESHQELSDGNVRKRGRPLSEKMKPN 190
           E+++GETSL+DS PP+           GKDGK LVESHQELSDG VR+RGRPLSEKMKPN
Sbjct: 124 ELSQGETSLDDSEPPVRTVQVVTVRVVGKDGKILVESHQELSDGKVRERGRPLSEKMKPN 183

Query: 191 EDPESAAVRAIREELGSLIGGGAE-GDIVTIDPNSYEMREEERCSGSYPGLPGCYVLHTL 249
           EDPESAAVR I+EELGS+I G  E  DIV IDPNSYEMR EER SGSYPGLPGCYVLH L
Sbjct: 184 EDPESAAVRGIKEELGSVINGETEICDIVMIDPNSYEMRVEERNSGSYPGLPGCYVLHIL 243

Query: 250 NATVEGLPEGDFCTYEHDEYSCLDDKKVANQAVGVRKHHWTWVSADSLE 298
           +ATVEGLPEGDFCTYE DEY   DDKKVA+QAV V+KH W WVSADS++
Sbjct: 244 SATVEGLPEGDFCTYEVDEYDDSDDKKVAHQAVSVKKHFWKWVSADSIQ 292