Miyakogusa Predicted Gene
- Lj1g3v1077820.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v1077820.1 Non Characterized Hit- tr|I1JRC0|I1JRC0_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.45854 PE,69.2,0,Ran
BP2/NZF zinc finger-like,NULL; OS03G0712200 PROTEIN,NULL; ZINC FINGER
PROTEIN,NULL;
ZF_RANBP2_1,,NODE_34375_length_3045_cov_30.137274.path1.1
(914 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr7g113360.1 | zinc finger (Ran-binding) family protein | HC ... 896 0.0
Medtr1g032260.1 | zinc finger (Ran-binding) family protein | HC ... 223 8e-58
Medtr6g069400.1 | zinc finger (Ran-binding) family protein | HC ... 190 7e-48
Medtr7g087047.1 | zinc finger (Ran-binding) family protein | HC ... 160 6e-39
Medtr7g087047.2 | zinc finger (Ran-binding) family protein | HC ... 133 1e-30
Medtr2g075450.1 | hypothetical protein | LC | chr2:31562549-3155... 61 4e-09
Medtr2g075470.1 | plant/T3F20-21 protein, putative | HC | chr2:3... 57 8e-08
>Medtr7g113360.1 | zinc finger (Ran-binding) family protein | HC |
chr7:46680792-46676183 | 20130731
Length = 886
Score = 896 bits (2315), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 459/662 (69%), Positives = 513/662 (77%), Gaps = 29/662 (4%)
Query: 20 NPKSPFFLKPYSTIPDTTSNQNNPKPSSLSARLSFVFDQIDVIEKERSQKHDTLQRIRAW 79
NPK+PFF + + TS NPKPSSLSARLSFVFDQID IEKERSQKH+TLQRIRAW
Sbjct: 17 NPKTPFFHSHHFS----TSQNPNPKPSSLSARLSFVFDQIDAIEKERSQKHETLQRIRAW 72
Query: 80 RESKTAQNDVVVTREQPVPPEPTTPAAYEVIS------------PAEVTKKEVELVHPWP 127
R+SK N + EQPV P +P S P E+ KKEVE VHPWP
Sbjct: 73 RDSKNTHNQIP---EQPVSESPPSPPTTTSSSLNEESDTNINSKPVELVKKEVEFVHPWP 129
Query: 128 EWIQLMERLVHQNYFDHKRTDEDKMVQDLGFEPPKVVDDAGLDFTKDLKSVLEACLNFGR 187
EWIQLMERLVHQNYFDH+R DEDKMVQDLGF+ ++V D GLDFTKD KSV ACLNFG+
Sbjct: 130 EWIQLMERLVHQNYFDHRRKDEDKMVQDLGFDSSEIVHDEGLDFTKDFKSVHAACLNFGK 189
Query: 188 DRFDILRSLSRQDIQILVGFGCPTVDKRVVFSSKVLRKHVHLDEGDVCSSCILRNTCEKA 247
DRFD+LRSLSRQDIQ+LVGFGCP VD++VVFS K+LRK VHLDEGDVCSSC LRN C+ A
Sbjct: 190 DRFDLLRSLSRQDIQVLVGFGCPNVDRKVVFSGKLLRKLVHLDEGDVCSSCSLRNNCDSA 249
Query: 248 YLLTNKEDEARTIDVMRLLLTFGFDPING-SVVNKSLLKQKSVRTVVRKLLHEVVKLSSV 306
YLLTNKEDEARTID+MR+LLT GFDPING SV+NK LLKQKSV+ VVRKLLHEVVKLSSV
Sbjct: 250 YLLTNKEDEARTIDIMRMLLTLGFDPINGSSVLNKPLLKQKSVKAVVRKLLHEVVKLSSV 309
Query: 307 PIDPNLSXXXXXXXXXXXXXXXXXXXRRVGRDDIEMKKGDWLCPKCDFMNFAKNNACLQC 366
PIDPNL RRVGRDD+EMK+GDWLCPKCDFMNFAKNN CLQC
Sbjct: 310 PIDPNLPPPVIKKPPPKVKQPPPTPKRRVGRDDVEMKRGDWLCPKCDFMNFAKNNVCLQC 369
Query: 367 DAKRPKRQLLPGEWECPQCNFLNYRRNVVCFHCECKRPPDEFLENKMQDRNHSPKPKFDK 426
DAKRPKRQLLPGEWEC +CNFLNYRRNVVCFHCECKRPPDEFLENK QDR +S P F+K
Sbjct: 370 DAKRPKRQLLPGEWECTECNFLNYRRNVVCFHCECKRPPDEFLENKTQDRKYSSGPNFNK 429
Query: 427 MGSRQEVSNAWNFDFDDNESDGADVAAFEYADAHAIDEDFPSDNNARRGNYKGREDDFEK 486
MGSRQEVSNAWNFDFDDNESDGADVA FEYAD+H ID+DF SDNNARR G EDDF K
Sbjct: 430 MGSRQEVSNAWNFDFDDNESDGADVANFEYADSHGIDKDFFSDNNARR---VGWEDDFAK 486
Query: 487 NGRLQGSHDGEYAN--PDHSRPRIGXXXXXXXXXXXSYELETQ--NSSTRMEPSKNNISE 542
N + GSHD EY N P SRPR G SYELET+ S +RME +K N SE
Sbjct: 487 NRSVPGSHDDEYVNAGPGPSRPRTGFDDFEDEDDIDSYELETETGTSVSRMEATKTNFSE 546
Query: 543 TEDYLESEDSDDTYDKILT--RDKTATGRSRQNRSIRKNTSYTGSKGDKLDFDSDEELSV 600
TED L+ EDS+D DK+ + KTA+GR+ + RS+RKNTS++ SK D+LD+DSDE+ S+
Sbjct: 547 TEDSLDWEDSEDIDDKMHAHNKSKTASGRTERTRSVRKNTSFSRSKEDELDYDSDEQRSL 606
Query: 601 LSNFKSSHVSAAGQKRKDRGPTKKLSFGSESDVDVGAGLYSDEDDDLNESYASRKNKGNK 660
LS FKSSHV AA Q+RK RGPTKKLSFGS+SD D AGLYSDEDDDLNE+Y+SR+NKGN+
Sbjct: 607 LSKFKSSHVFAADQRRKGRGPTKKLSFGSDSDEDGSAGLYSDEDDDLNEAYSSRQNKGNR 666
Query: 661 FD 662
D
Sbjct: 667 HD 668
Score = 89.0 bits (219), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/60 (71%), Positives = 51/60 (85%)
Query: 855 FDDFDGSSRQSYRNGRGSQGNDRPKRRFEDREHGTRHFDKYSKDEKGAGEFRNSRRVIER 914
FDDFDGSSR+SY N RGS+GNDR +++F+DREHG F+KYS DEKG +FRNSRRVIER
Sbjct: 827 FDDFDGSSRKSYGNDRGSRGNDRSRQKFDDREHGRGQFNKYSMDEKGGSDFRNSRRVIER 886
>Medtr1g032260.1 | zinc finger (Ran-binding) family protein | HC |
chr1:11448862-11445087 | 20130731
Length = 506
Score = 223 bits (567), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 134/374 (35%), Positives = 190/374 (50%), Gaps = 81/374 (21%)
Query: 121 ELVHPWPEWIQLMERLVHQNYFDHKRTDEDKMVQDLGFEPPKVVDDAGLDFTKDLKSVLE 180
++ HPWPEW+ LME L+ + +F + FE P + K+ +
Sbjct: 59 QISHPWPEWVYLMEYLIKKGHFH---------AEGNPFENPPLG-------AKESNLIRT 102
Query: 181 ACLNFGRDRFDILRSLSRQDIQILVGFGCPTVDKRVVFSSKVLRKHVHLDEGDVCSSCIL 240
ACLNFGRD ILR LSR+DI ++V FGCP++D++VV S K LR + +DEG+VCSSC L
Sbjct: 103 ACLNFGRDHAHILRFLSRKDIGVIVTFGCPSLDRKVVNSGKRLRAYAGIDEGNVCSSCNL 162
Query: 241 RNTCEKAYLLTNKEDEARTIDVMRLLLTFGFDPINGSVVNKSLLKQKSVRTVVRKLLHEV 300
R CE+A++ +++ RT+DVMR++LT+G DPI GSV NK L K V+ VR+LL ++
Sbjct: 163 RGDCERAFVKAREDEGGRTVDVMRIILTYGLDPIIGSVDNKPSL-NKMVKESVRRLLKKI 221
Query: 301 VKLSSVPIDPNLSXXXXXXXXXXXXXXXXXXXRRVGRDDIEMKKGDWLCP---------- 350
V+ + + N S + G+ D+ +K+GDWLCP
Sbjct: 222 VECGT---EENPSTFPDITEDAVEEVHPNPLDK--GKKDVPLKQGDWLCPKCNFHNFARN 276
Query: 351 ----------------------------------KCDFMNFAKNNACLQCDAKRPKRQLL 376
KC+F+NFAKN CLQC R++
Sbjct: 277 IKCLHCDNFCEEKIKQLKEDNNHLPLKKGDWICDKCNFLNFAKNTRCLQCKEGPSNRRIN 336
Query: 377 PGEWECPQCNFLNYRRNVVCFHCECKRPPDEFLEN-----KMQDRNHSPKPKFDKMGSRQ 431
PGEWEC CN++N+RRN+VC C+ +RP N + +DRNH K SR
Sbjct: 337 PGEWECESCNYINFRRNMVCLKCDHRRPKVSNASNSSPQSQGEDRNHYEK-------SRP 389
Query: 432 EVSNAWNFDFDDNE 445
+ W FD N+
Sbjct: 390 TFAGYW---FDGNK 400
>Medtr6g069400.1 | zinc finger (Ran-binding) family protein | HC |
chr6:24975567-24969959 | 20130731
Length = 470
Score = 190 bits (482), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 105/313 (33%), Positives = 166/313 (53%), Gaps = 31/313 (9%)
Query: 102 TTPAAYEVISPAEVTKKEVELVHPWPEWIQLMERLVHQNYFDHKRTDEDKMVQDLGFEPP 161
T+ +A+ + A + VHPWPEWI ++RL + Y K D++ + D+
Sbjct: 44 TSFSAFSTSTAAAEEESLSSTVHPWPEWISFVDRLRAKGYLS-KSADDNSVYSDINL--- 99
Query: 162 KVVDDAGLDFTKDLKSVLEACLNFGRDRFDILRSLSRQDIQILVGFGCPTVDKRVVFSSK 221
+ +A L+F RDR+D+ + LS +DIQ +V GCP ++ V S+K
Sbjct: 100 ----------------LKDASLSFARDRYDVFKLLSSEDIQAVVEDGCPNFLRKAVNSAK 143
Query: 222 VLRKHVHLDEGDVCSSCILRNTCEKAY-LLTNKEDEARTIDVMRLLLTFGFDPINGSVVN 280
LR H+ LDEGDVCS+C LR +C++AY +L E +ART+D++R+LL + DP+ S
Sbjct: 144 RLRAHLRLDEGDVCSACNLRGSCDRAYVILKESEADARTVDIVRILLFYAIDPLVLSGGE 203
Query: 281 KSLLKQKSVRTVVRKLLHEVVKLSSVPIDPNLSXXXXXXXXXXXXXXXXXXXRRVGR--- 337
K ++ + + RKLL ++++LS P +
Sbjct: 204 KPPGRE-VIESSARKLLSQLIELSEWSPPPPPLPAYSKSTSQKDVSKVKPLSFKAAEMLS 262
Query: 338 DDIEMKKGDWLCPKCDFMNFAKNNACLQCDAKRPKR------QLLPGEWECPQCNFLNYR 391
++EMKKGDW+C KC+FMNF++N CL C+ PK ++ G+W C +CNF+N+
Sbjct: 263 KNVEMKKGDWVCQKCNFMNFSRNRKCLNCEEDGPKSDDPRTFEMKEGDWICTECNFMNFS 322
Query: 392 RNVVCFHCECKRP 404
RN+ C C+ + P
Sbjct: 323 RNITCLECKTEGP 335
Score = 83.6 bits (205), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 46/67 (68%), Gaps = 2/67 (2%)
Query: 334 RVGRDDIEMKKGDWLCPKCDFMNFAKNNACLQCDAKRPKRQLLPGEWECPQCNFLNYRRN 393
R+ ++++MKKGDW CP+C FMNFA N C +C RPK+ PG+W CP+C+F+N+
Sbjct: 340 RLDTNEVQMKKGDWTCPQCGFMNFASNVKCFKCPEPRPKKH--PGDWSCPKCDFMNFASK 397
Query: 394 VVCFHCE 400
CF C+
Sbjct: 398 DKCFRCQ 404
Score = 82.4 bits (202), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 47/74 (63%), Gaps = 9/74 (12%)
Query: 340 IEMKKGDWLCPKCDFMNFAKNNACLQCDAKRPKR---------QLLPGEWECPQCNFLNY 390
EMK+GDW+C +C+FMNF++N CL+C + PKR Q+ G+W CPQC F+N+
Sbjct: 304 FEMKEGDWICTECNFMNFSRNITCLECKTEGPKRVNRLDTNEVQMKKGDWTCPQCGFMNF 363
Query: 391 RRNVVCFHCECKRP 404
NV CF C RP
Sbjct: 364 ASNVKCFKCPEPRP 377
Score = 71.2 bits (173), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 35/70 (50%), Gaps = 12/70 (17%)
Query: 345 GDWLCPKCDFMNFAKNNACLQCDAKRPKRQLLPGE------------WECPQCNFLNYRR 392
GDW CPKCDFMNFA + C +C P PGE W CP+C+F NY R
Sbjct: 382 GDWSCPKCDFMNFASKDKCFRCQESNPNPNKYPGEWPNPNSKKYPGDWSCPKCDFYNYAR 441
Query: 393 NVVCFHCECK 402
N C C K
Sbjct: 442 NTTCLKCNAK 451
>Medtr7g087047.1 | zinc finger (Ran-binding) family protein | HC |
chr7:33870448-33877120 | 20130731
Length = 1090
Score = 160 bits (405), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 95/284 (33%), Positives = 137/284 (48%), Gaps = 49/284 (17%)
Query: 124 HPWPEWIQLMERLVHQNYFDHKRTDEDKMVQDLGFEPPKVVDDAGLDFTKDLKSVLEACL 183
HPWPE+ + + + G+ P DA + ++ + ACL
Sbjct: 78 HPWPEFSRFLSH-----------------ISSAGYTSPS---DAFSPTVELSQAEVSACL 117
Query: 184 NFGRDRFDILRSLSRQDIQILVGFGCPTVDKRVVFSSK---VLRKHVHLDEGDVCSSCIL 240
+F RDR ++LR LS +D+ ++V G P +FS V + L GD S L
Sbjct: 118 SFARDRPNLLRLLSIRDVAVVVQHGTP-----FMFSDSQDSVSKMKSFLSNGD---STAL 169
Query: 241 RNTCEKAYLLTNKEDEARTIDVMRLLLTFGFDPINGSVVNKSLLKQKSVRTVVRKLLHEV 300
D+A +D+M+ +L++ + S +N +L + V + VR L E+
Sbjct: 170 ------------DSDKANMVDLMKFMLSYASSCLVSSEMN-NLYNRNLVESSVRNLFGEL 216
Query: 301 VKLSSVPIDPNLSXXXXXXXXXXXXXXXXXXXRRVGRDDIEMKKGDWLCPKCDFMNFAKN 360
KLS PN + +IEMK+GDW+CP+C+FMNFA+N
Sbjct: 217 FKLSYSTPGPNSFDSVQNQMPGGRFEHTMPPGQ-----NIEMKRGDWICPRCNFMNFARN 271
Query: 361 NACLQCDAKRPKRQLLPGEWECPQCNFLNYRRNVVCFHCECKRP 404
CL+C+ RPKRQL GEWECPQC+F NY RNV C C+CKRP
Sbjct: 272 MKCLECEEARPKRQLTGGEWECPQCDFHNYGRNVACLRCDCKRP 315
>Medtr7g087047.2 | zinc finger (Ran-binding) family protein | HC |
chr7:33870448-33876993 | 20130731
Length = 915
Score = 133 bits (334), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 61/145 (42%), Positives = 84/145 (57%), Gaps = 6/145 (4%)
Query: 260 IDVMRLLLTFGFDPINGSVVNKSLLKQKSVRTVVRKLLHEVVKLSSVPIDPNLSXXXXXX 319
+D+M+ +L++ + S +N +L + V + VR L E+ KLS PN
Sbjct: 2 VDLMKFMLSYASSCLVSSEMN-NLYNRNLVESSVRNLFGELFKLSYSTPGPNSFDSVQNQ 60
Query: 320 XXXXXXXXXXXXXRRVGRDDIEMKKGDWLCPKCDFMNFAKNNACLQCDAKRPKRQLLPGE 379
+ +IEMK+GDW+CP+C+FMNFA+N CL+C+ RPKRQL GE
Sbjct: 61 MPGGRFEHTMPPGQ-----NIEMKRGDWICPRCNFMNFARNMKCLECEEARPKRQLTGGE 115
Query: 380 WECPQCNFLNYRRNVVCFHCECKRP 404
WECPQC+F NY RNV C C+CKRP
Sbjct: 116 WECPQCDFHNYGRNVACLRCDCKRP 140
>Medtr2g075450.1 | hypothetical protein | LC |
chr2:31562549-31559979 | 20130731
Length = 282
Score = 61.2 bits (147), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 66/133 (49%), Gaps = 5/133 (3%)
Query: 181 ACLNFGRDRFDILRSLSRQDIQILVGFGCPTVDKRVVFSSKVLRKHVHLDEGDVCSSCIL 240
A + F D I LS ++ + FGCP + + VF +K LRK + + E VCS C+L
Sbjct: 146 AAMKFATDNPQIAEWLSGSALKQVAVFGCPFIGRNGVFPAKRLRKCLEVPENTVCSKCML 205
Query: 241 RNTCEKAYLLTNKEDEARTIDVMRLLLTFGFDPINGSVVNKSLLKQKSVRTVVRKLLHEV 300
R +C+ + D+ DVM++++ + ++ +V L + V LL+E
Sbjct: 206 RESCKFVNENVSGCDKLDLNDVMKVIIPYALHWMDPQLVVSDELNKS-----VNHLLNEF 260
Query: 301 VKLSSVPIDPNLS 313
VKLS P ++S
Sbjct: 261 VKLSQSPETASIS 273
>Medtr2g075470.1 | plant/T3F20-21 protein, putative | HC |
chr2:31567796-31564591 | 20130731
Length = 309
Score = 57.0 bits (136), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 66/131 (50%), Gaps = 13/131 (9%)
Query: 181 ACLNFGRDRFDILRSLSRQDIQILVGFGCPTVDKRVVFSSKVLRKHVHLDEGDVCSSCIL 240
A F D +I + LS ++ ++ FGCP++ + VF +K LRK + E VCS C+L
Sbjct: 186 AAKKFANDNLEIAKWLSGSALKQMLVFGCPSISRNDVFPAKRLRKFFEVPENTVCSKCML 245
Query: 241 RNTC----EKAYLL-TNKEDEARTIDVMRLLLTFGFDPINGSVVNKSLLKQKSVRTVVRK 295
R +C + + TNK D + V+ +++ +V+ L+ V+ V
Sbjct: 246 RESCKFVNQNVWKCDTNKLDLEIAVKVV---ISYALH-----LVHPQLVVSDEVKKSVDH 297
Query: 296 LLHEVVKLSSV 306
LL+E VKLS +
Sbjct: 298 LLNEFVKLSQI 308