Miyakogusa Predicted Gene
- Lj1g3v1075660.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v1075660.1 Non Characterized Hit- tr|I3S5T1|I3S5T1_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,100,0,seg,NULL;
SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL; LEA_2,Late
embryogenesis abundant protein,CUFF.26711.1
(210 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr3g092790.1 | late embryogenesis abundant protein | HC | chr... 290 5e-79
Medtr7g106050.1 | late embryogenesis abundant hydroxyproline-ric... 135 2e-32
Medtr1g057420.1 | late embryogenesis abundant hydroxyproline-ric... 124 6e-29
Medtr4g051880.1 | late embryogenesis abundant protein | HC | chr... 122 2e-28
Medtr2g086790.1 | late embryogenesis abundant protein | HC | chr... 118 3e-27
Medtr7g118270.1 | late embryogenesis abundant protein | HC | chr... 96 3e-20
Medtr8g024250.1 | late embryogenesis abundant protein | HC | chr... 80 2e-15
Medtr2g011350.1 | late embryogenesis abundant protein | HC | chr... 75 4e-14
Medtr7g106080.1 | late embryogenesis abundant hydroxyproline-ric... 72 3e-13
Medtr7g106000.1 | harpin-induced-like protein | HC | chr7:430499... 65 6e-11
Medtr4g119428.1 | late embryogenesis abundant protein | HC | chr... 62 4e-10
Medtr1g057400.1 | harpin-induced-like protein | HC | chr1:252381... 61 9e-10
Medtr7g106030.1 | late embryogenesis abundant protein | HC | chr... 57 1e-08
Medtr3g063310.1 | late embryogenesis abundant hydroxyproline-ric... 55 4e-08
Medtr7g106010.1 | harpin-induced-like protein | HC | chr7:430554... 54 1e-07
Medtr1g105570.1 | late embryogenesis abundant hydroxyproline-ric... 53 2e-07
Medtr7g105870.1 | harpin-induced-like protein | HC | chr7:429903... 53 2e-07
Medtr1g057270.1 | late embryogenesis abundant protein | HC | chr... 53 2e-07
Medtr2g100060.1 | late embryogenesis abundant protein, putative ... 53 2e-07
Medtr5g076170.1 | late embryogenesis abundant hydroxyproline-ric... 52 6e-07
Medtr7g106100.1 | late embryogenesis abundant protein | HC | chr... 51 8e-07
Medtr3g104460.1 | chaperonin CPN60-like protein | HC | chr3:4810... 51 1e-06
>Medtr3g092790.1 | late embryogenesis abundant protein | HC |
chr3:42421617-42422666 | 20130731
Length = 211
Score = 290 bits (743), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 153/212 (72%), Positives = 174/212 (82%), Gaps = 3/212 (1%)
Query: 1 MSQITIKSPKHCATKQGFKIERNYKKLYFAFSASFTTXXXXXXXXXXXXHPSKPQFSLKE 60
MSQITIKSPKHCATKQ +IERNYKK++FAFS FTT PSKPQFSL+E
Sbjct: 1 MSQITIKSPKHCATKQ-VRIERNYKKIFFAFSTFFTTILLLILLIYFILKPSKPQFSLQE 59
Query: 61 VDIYQFNLSGPMLNSSIQLTLLSKNPNQKVSIYYDEFQVYATYKGQRITGDSSVPPFYQG 120
+DIYQ NLSGP+LNSSIQLTLLSKNPNQKVSIYYDEFQVYATYK Q+IT DS VPPFYQG
Sbjct: 60 LDIYQLNLSGPILNSSIQLTLLSKNPNQKVSIYYDEFQVYATYKNQQITSDSFVPPFYQG 119
Query: 121 NEESNLLTASLIGNGLPVAPSLGYEVGRDQINGRLVLNLRVIGKLRWKIGTWVSGHYRFN 180
+ESN L++SLIGNGLPVAPS+GYE+ RDQ++GRL L+L+ GKLRWKIGTWVSG YRFN
Sbjct: 120 TQESNFLSSSLIGNGLPVAPSIGYELSRDQVSGRLGLSLKANGKLRWKIGTWVSGRYRFN 179
Query: 181 VNCVSVMAF--GPSMLGAPLISAQGAQCSTTV 210
VNC S++AF GP++ PL S GA CSTT+
Sbjct: 180 VNCDSIVAFGIGPTLNVPPLNSKLGALCSTTI 211
>Medtr7g106050.1 | late embryogenesis abundant hydroxyproline-rich
glycoprotein | HC | chr7:43077352-43076086 | 20130731
Length = 210
Score = 135 bits (341), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 67/189 (35%), Positives = 109/189 (57%), Gaps = 2/189 (1%)
Query: 8 SPKHCATKQGFKIERNYKKLYFAFSASFTTXXXXXXXXXXXXHPSKPQFSLKEVDIYQFN 67
S K C +G K +R ++K+++ PSKP F L++V +Y FN
Sbjct: 2 SVKECNHHKGKKHKR-FRKIFWGIIIFLFIVLVTILIIWAVLKPSKPSFILQDVTVYAFN 60
Query: 68 LSGP-MLNSSIQLTLLSKNPNQKVSIYYDEFQVYATYKGQRITGDSSVPPFYQGNEESNL 126
+ P L S+ Q+T+ S+NPN K+ IYYD Y TY+ Q+IT +++PP YQG++E ++
Sbjct: 61 ATVPNFLTSNFQVTVSSRNPNDKIGIYYDRLDSYVTYRSQQITYRTAIPPSYQGHKEVDV 120
Query: 127 LTASLIGNGLPVAPSLGYEVGRDQINGRLVLNLRVIGKLRWKIGTWVSGHYRFNVNCVSV 186
+ + G +PVAP + +DQ NG +++ ++ G++RWK+G ++SGHY V C +
Sbjct: 121 WSPFVYGTNVPVAPYNSVALSQDQDNGNVLVVVKFDGRVRWKVGAFISGHYHIFVRCPAF 180
Query: 187 MAFGPSMLG 195
+ FGP G
Sbjct: 181 ITFGPRSNG 189
>Medtr1g057420.1 | late embryogenesis abundant hydroxyproline-rich
glycoprotein | HC | chr1:25248100-25246887 | 20130731
Length = 209
Score = 124 bits (311), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 107/192 (55%), Gaps = 2/192 (1%)
Query: 8 SPKHCATKQGFKIERNYKKLYFAFSASFTTXXXXXXXXXXXXHPSKPQFSLKEVDIYQFN 67
S K C +G K ++++++A P+KP F L +V +Y FN
Sbjct: 2 SVKECDHHKGRK-RILFQRIFWAIMVFLFLVLLTILLIWAILRPTKPTFILLDVTLYAFN 60
Query: 68 LSGP-MLNSSIQLTLLSKNPNQKVSIYYDEFQVYATYKGQRITGDSSVPPFYQGNEESNL 126
S P L S+ Q+TL S+NPN + +YYD Y TY+ Q+IT +++PP YQG+ E ++
Sbjct: 61 ASQPNFLTSNFQVTLSSRNPNDNIGVYYDRLDTYMTYRSQQITLRTAIPPSYQGHNEYDV 120
Query: 127 LTASLIGNGLPVAPSLGYEVGRDQINGRLVLNLRVIGKLRWKIGTWVSGHYRFNVNCVSV 186
+ + GN +PVAP + +D+ NG + + +RV G++R+K+G ++SG Y +V C +
Sbjct: 121 WSPFVYGNDIPVAPFNSVSLSQDENNGNIFVTVRVDGRVRFKVGAFISGRYHIHVRCPAY 180
Query: 187 MAFGPSMLGAPL 198
++ G + G +
Sbjct: 181 ISLGNNGKGVDM 192
>Medtr4g051880.1 | late embryogenesis abundant protein | HC |
chr4:18769379-18770350 | 20130731
Length = 219
Score = 122 bits (307), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 56/148 (37%), Positives = 96/148 (64%), Gaps = 9/148 (6%)
Query: 51 PSKPQFSLKEVDIYQFNLSGP---------MLNSSIQLTLLSKNPNQKVSIYYDEFQVYA 101
P+KP+F +++ IY FN+S P L ++Q+TL + NPN+++ IYY + VYA
Sbjct: 45 PTKPRFMIQDATIYTFNISSPNSNPFPIPNTLTLTMQVTLTTHNPNKRIGIYYQKLHVYA 104
Query: 102 TYKGQRITGDSSVPPFYQGNEESNLLTASLIGNGLPVAPSLGYEVGRDQINGRLVLNLRV 161
+YK Q+I+ +S+P YQG+++ + + + G G+PV+P + +DQ NG +++NL+V
Sbjct: 105 SYKSQQISLPTSIPDTYQGHKDFTIWSPFIYGVGVPVSPFTLSNLQQDQNNGMVLVNLKV 164
Query: 162 IGKLRWKIGTWVSGHYRFNVNCVSVMAF 189
G+++WK+G W+SG Y VNC + + F
Sbjct: 165 NGRVKWKVGRWISGRYHIFVNCPAYVRF 192
>Medtr2g086790.1 | late embryogenesis abundant protein | HC |
chr2:36569865-36568623 | 20130731
Length = 221
Score = 118 bits (296), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 57/146 (39%), Positives = 93/146 (63%), Gaps = 12/146 (8%)
Query: 50 HPSKPQFSLKEVDIYQFNLSG---------PMLNS---SIQLTLLSKNPNQKVSIYYDEF 97
P+KP+F L++ ++ FNLS P N+ +IQ+TL S NPN K+ IYY +
Sbjct: 42 RPTKPRFILQDATVFAFNLSSTGETPSSTTPTPNTITLTIQVTLSSFNPNSKIGIYYHKL 101
Query: 98 QVYATYKGQRITGDSSVPPFYQGNEESNLLTASLIGNGLPVAPSLGYEVGRDQINGRLVL 157
YA+Y+GQ+I+ + +P YQG+ + + + L G +PV+P L + +DQ +G +++
Sbjct: 102 DAYASYRGQQISLATELPQTYQGHRDVAVWSPILYGAAVPVSPYLSEILRQDQTSGGVLV 161
Query: 158 NLRVIGKLRWKIGTWVSGHYRFNVNC 183
N++V G+++WK+GTWVSG Y +VNC
Sbjct: 162 NVKVNGRVKWKVGTWVSGRYHIDVNC 187
>Medtr7g118270.1 | late embryogenesis abundant protein | HC |
chr7:49087219-49088602 | 20130731
Length = 229
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 52/151 (34%), Positives = 82/151 (54%), Gaps = 2/151 (1%)
Query: 51 PSKPQFSLKEVDIYQFNL-SGPMLNSSIQLTLLSKNPNQKVSIYYDEFQVYATYKGQRIT 109
P KP F++ IY FN S P+L++++Q +L KNPN++VS YYD F + +Y+ Q IT
Sbjct: 70 PHKPHFTVVGAAIYGFNTTSPPLLSATLQFNILIKNPNKRVSAYYDRFSAFVSYRNQAIT 129
Query: 110 GDSSVPPFYQGNEESNLLTASLIGNGLPVAPSLGYEVGRDQINGRLVLNLRVIGKLRWKI 169
+PP + L+ + G +PV+ + + D+ G + L L +G+LRWK
Sbjct: 130 PQVMLPPLFLEKHSQVSLSPVIGGTAVPVSVEVSNGLMMDEAYGVVGLKLVFLGRLRWKA 189
Query: 170 GTWVSGHYRFNVNCVSVMAFGPSMLG-APLI 199
GT S HY F C ++ ++G PL+
Sbjct: 190 GTIRSAHYGFYGKCDVLIGLKKGVVGQVPLL 220
>Medtr8g024250.1 | late embryogenesis abundant protein | HC |
chr8:8894604-8893236 | 20130731
Length = 281
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 78/154 (50%), Gaps = 2/154 (1%)
Query: 50 HPSKPQFSLKEVDIYQFN-LSGPMLNSSIQLTLLSKNPNQKVSIYYDEFQVYATYKGQRI 108
HPSKP ++ IY N S P ++ S+Q T+ +NPN++VSIY+D + +Y+ I
Sbjct: 121 HPSKPHITVTSAAIYSLNATSPPDMSISMQFTIFIRNPNKRVSIYFDRLSTFVSYRNHPI 180
Query: 109 TGDSSVPPFYQGNEESNLLTASLIGNGLPVAPSLGYEVGRDQINGRLVLNLRVIGKLRWK 168
T +P Y E+ ++ L G +PV+ + + D+ G + + L G+LRWK
Sbjct: 181 TPHHMLPSLYLEKHETVSVSPVLGGVPVPVSVDVLNGLVLDENYGVVGVKLIFQGRLRWK 240
Query: 169 IGTWVSGHYRFNVNCVSVMAFGPSMLGA-PLISA 201
G S HY C ++ ++G PLI A
Sbjct: 241 TGEIKSAHYNMYAKCDLLLGLKKGLVGQIPLIGA 274
>Medtr2g011350.1 | late embryogenesis abundant protein | HC |
chr2:2751617-2750551 | 20130731
Length = 202
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 77/138 (55%), Gaps = 2/138 (1%)
Query: 51 PSKPQFSLKEVDIYQFNLSGP-MLNSSIQLTLLSKNPNQKVSIYYDEFQVYATYKGQRIT 109
P Q+S+++ I+ FNL+ L ++ T+ SKNPN KVS+YYD +V Y+ Q +
Sbjct: 48 PKNLQYSVEDASIHNFNLTDANHLYANFDFTIRSKNPNSKVSLYYDSIEVSVRYEDQTLA 107
Query: 110 GDSSVPPFYQGNEESNLLTASLIGNGLPVAPSLGYEVGRDQINGRLVLNLRVIGKLRWKI 169
+ +V PF+Q ++ + A L + + S+ ++ ++ +G + L++ + ++R+K+
Sbjct: 108 TN-AVQPFFQPHKNVTRMHARLTAQTVALYDSVPKDLKLERSSGDIALDVFIRARIRFKV 166
Query: 170 GTWVSGHYRFNVNCVSVM 187
G + H ++C V+
Sbjct: 167 GLLKTRHRTLRISCSPVL 184
>Medtr7g106080.1 | late embryogenesis abundant hydroxyproline-rich
glycoprotein | HC | chr7:43091539-43090038 | 20130731
Length = 111
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 53/80 (66%)
Query: 112 SSVPPFYQGNEESNLLTASLIGNGLPVAPSLGYEVGRDQINGRLVLNLRVIGKLRWKIGT 171
+++PP YQG++E ++ + + G +PVAP + +DQ NG +++ ++ G++RWK+G
Sbjct: 7 TAIPPSYQGHKEVDVWSPFVYGTNVPVAPYNSVALSQDQDNGNVLVVVKFDGRVRWKVGA 66
Query: 172 WVSGHYRFNVNCVSVMAFGP 191
++SGHY V C + + FGP
Sbjct: 67 FISGHYHIFVRCPAFITFGP 86
>Medtr7g106000.1 | harpin-induced-like protein | HC |
chr7:43049967-43048978 | 20130731
Length = 227
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 72/138 (52%), Gaps = 4/138 (2%)
Query: 50 HPSKPQFSLKEVDIYQFNLSGPMLNSSIQLTLLSKNPNQKVSIYYDEFQVYATYKGQRIT 109
P +F + E ++ +F+ S LN ++ L ++NPN+K++IYYD+ + A Y+G R
Sbjct: 65 QPRGFKFYVDEANLTEFDYSNNTLNYNMVLNFTARNPNKKLNIYYDKVEARAFYEGSRFA 124
Query: 110 GDSSVP---PFYQGNEESNLLTASLIGNGLPVAPSLGY-EVGRDQINGRLVLNLRVIGKL 165
+ F Q + SN ++A G + V S E +D+ + + +R+ ++
Sbjct: 125 NVDVITHMNSFRQYKKSSNPMSAVFSGQHVFVLDSDQVSEFNKDKSDEVYDIYVRLYFRI 184
Query: 166 RWKIGTWVSGHYRFNVNC 183
R+++G +SG Y+ V C
Sbjct: 185 RFRLGDLISGDYKPKVKC 202
>Medtr4g119428.1 | late embryogenesis abundant protein | HC |
chr4:49493793-49494536 | 20130731
Length = 247
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 82/151 (54%), Gaps = 7/151 (4%)
Query: 51 PSKPQFSLKEVDIYQFNLSGP-MLNSSIQLTLLSKNPNQKVSIYYDEFQVYATYKGQRIT 109
P+ +F++ E + QFN + L+ + + L +NPN++VS+YY++ + + YK R
Sbjct: 79 PNALKFTVMEASLTQFNFTNNNTLHYDLSVNLTIRNPNRRVSVYYNDIETLSFYKDFRF- 137
Query: 110 GDSSVPPFYQGNEESNLLTASLIGNG-LPVAPSLGYEVGRDQINGRLVLNLRVIGKLRWK 168
G ++ F+Q ++ ++LL G +P++ S E ++ NG +NL+V+ +R+
Sbjct: 138 GSQTLGKFFQPHKNTSLLNPVFKGQQVIPLSSSQISEFNKETNNGVYGINLKVLLNVRFA 197
Query: 169 IGTWVSGHYRFNVNCVSVMAF----GPSMLG 195
+G +G+ + N +C + F G S LG
Sbjct: 198 LGLIKTGNLKQNHHCDLKVPFKSHNGTSSLG 228
>Medtr1g057400.1 | harpin-induced-like protein | HC |
chr1:25238191-25237296 | 20130731
Length = 209
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 79/156 (50%), Gaps = 9/156 (5%)
Query: 50 HPSKPQFSLKEVDIYQFNLSGPM--LNSSIQLTLLSKNPNQKVSIYYDEFQVYATYKGQR 107
P +FS+KE + +FN S L+ ++ L ++NPN+K++IYYD + +A+Y+G R
Sbjct: 44 QPRTFKFSVKEAKLTKFNYSDDTNTLHYNLVLNFTARNPNKKLNIYYDVIEGHASYEGTR 103
Query: 108 ITGDSSVP---PFYQGNEESNLLTASLIGNGLPVAPSLGY-EVGRDQINGRLVLNLRVIG 163
+ F Q + +N ++ G + V RD+ +G +N+++
Sbjct: 104 FASTKVITWLNSFRQYTKSTNPMSGVFSGQRVVVFDRDQVSNFERDEKDGVFHINVKLNF 163
Query: 164 KLRWKIGTWVSGHYRFNVNC---VSVMAFGPSMLGA 196
+R+++G ++ H + N+ C V +A G ++ A
Sbjct: 164 DMRFRLGDYIGPHTKGNIKCRLDVPFVANGTKVMKA 199
>Medtr7g106030.1 | late embryogenesis abundant protein | HC |
chr7:43062629-43061934 | 20130731
Length = 231
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 69/138 (50%), Gaps = 4/138 (2%)
Query: 50 HPSKPQFSLKEVDIYQFNLSGPMLNSSIQLTLLSKNPNQKVSIYYDEFQVYATYKGQRIT 109
P +F + + ++ QF+ + L+ + L + NPN+K+SIYYD+ + A Y+G R
Sbjct: 66 QPRAFKFYVTKAELTQFDYTNNTLHYDMVLNFTAHNPNKKLSIYYDKVEARAFYEGSRFA 125
Query: 110 GDSSVP---PFYQGNEESNLLTASLIGNGLPVAPSLGY-EVGRDQINGRLVLNLRVIGKL 165
+ F Q + S+ ++ +G L V + E +D+ G + +++ ++
Sbjct: 126 NVDVITHMNSFRQNKKTSDPMSGVFLGQKLLVLDNDQVSEFSKDKSVGVYGIYVKLYFRI 185
Query: 166 RWKIGTWVSGHYRFNVNC 183
R+K+G +S Y+ V C
Sbjct: 186 RFKLGDSISRTYKPKVKC 203
>Medtr3g063310.1 | late embryogenesis abundant hydroxyproline-rich
glycoprotein | HC | chr3:28678557-28679754 | 20130731
Length = 252
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 64/134 (47%), Gaps = 1/134 (0%)
Query: 51 PSKPQFSLKEVDIYQFNLSGP-MLNSSIQLTLLSKNPNQKVSIYYDEFQVYATYKGQRIT 109
P P++S+ + I QFNLS L + +T+ ++NPN+K+ IYY + + +
Sbjct: 93 PKLPKYSVDRLRITQFNLSDDNSLFVTFNVTVTARNPNKKIGIYYVSGSHISAWYKETGL 152
Query: 110 GDSSVPPFYQGNEESNLLTASLIGNGLPVAPSLGYEVGRDQINGRLVLNLRVIGKLRWKI 169
+ S+P FYQG+ + +L L G + Q G + L+++V +R K+
Sbjct: 153 CEGSLPKFYQGHRNTTVLNLPLTGQTQDATGLFNTLQQQLQEAGNIPLDIKVNQNVRVKL 212
Query: 170 GTWVSGHYRFNVNC 183
G +F V C
Sbjct: 213 GKLKIFRVKFRVRC 226
>Medtr7g106010.1 | harpin-induced-like protein | HC |
chr7:43055402-43054683 | 20130731
Length = 227
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 68/138 (49%), Gaps = 4/138 (2%)
Query: 50 HPSKPQFSLKEVDIYQFNLSGPMLNSSIQLTLLSKNPNQKVSIYYDEFQVYATYKGQRIT 109
P +F + + ++ QF+ + L ++ L S NPN+K+ IYYD+ + A Y+G R +
Sbjct: 62 QPRAFKFYVTKAELTQFDHTNNTLYYNMVLNFTSHNPNKKLGIYYDKVEAQAFYEGSRFS 121
Query: 110 GDSSVP---PFYQGNEESNLLTASLIGNGLPVAPSLGY-EVGRDQINGRLVLNLRVIGKL 165
+ F Q + SN +T G L + + E +D+ G + +++ ++
Sbjct: 122 NVDVITHMNSFRQDKKNSNPMTGVFSGQKLLMLDNDQISEFNKDKNVGVYDIYVKLYFRI 181
Query: 166 RWKIGTWVSGHYRFNVNC 183
R+K+G +S ++ V C
Sbjct: 182 RFKLGDSISRKFKPKVKC 199
>Medtr1g105570.1 | late embryogenesis abundant hydroxyproline-rich
glycoprotein | HC | chr1:47563825-47564910 | 20130731
Length = 231
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 61/134 (45%), Gaps = 2/134 (1%)
Query: 51 PSKPQFSLKEVDIYQFNLSGPMLNSSIQLTLLSKNPNQKVSIYYDEFQVYATYKGQRITG 110
P +P+F ++E + N+ I + ++N NQ + +YY+ + Y+ + G
Sbjct: 75 PHRPRFFMREFTLTGLAQQTGFGNAQIAYKVDARNSNQNIGVYYEAMEGSLYYRNN-VIG 133
Query: 111 DSSVP-PFYQGNEESNLLTASLIGNGLPVAPSLGYEVGRDQINGRLVLNLRVIGKLRWKI 169
+P P YQG + + + G L V E+ D +G ++ L + +++KI
Sbjct: 134 SMHIPFPSYQGPKNTTKVNGVFNGATLTVNSQGWSEIQNDGADGTVMFILELTTVIKFKI 193
Query: 170 GTWVSGHYRFNVNC 183
+W S +R + C
Sbjct: 194 SSWESQRHRMHATC 207
>Medtr7g105870.1 | harpin-induced-like protein | HC |
chr7:42990385-42989209 | 20130731
Length = 228
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 58/102 (56%), Gaps = 4/102 (3%)
Query: 84 KNPNQKVSIYYDEFQVYATYKGQRITGDSSV-PPFYQGNEESNLLTASLIGNGLPVAPS- 141
+NPN+++ IYYD + A Y R+ DS + PFYQG++ ++ L S G + V S
Sbjct: 102 RNPNRRLGIYYDSIEARALYHDARV--DSIILDPFYQGHKTTHFLNPSFKGQKVVVLSSD 159
Query: 142 LGYEVGRDQINGRLVLNLRVIGKLRWKIGTWVSGHYRFNVNC 183
E+ +++ +G +++++ K+R+K+G + + + + C
Sbjct: 160 QSLELNKEKDSGVYEIDVKMYLKVRFKLGVFKTRKMKPKITC 201
>Medtr1g057270.1 | late embryogenesis abundant protein | HC |
chr1:25170569-25169254 | 20130731
Length = 248
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 76/156 (48%), Gaps = 12/156 (7%)
Query: 51 PSKPQFSLKEVDIYQFNLSGP-MLNSSIQLTLLSKNPNQKVSIYYDEFQVYATYKGQRIT 109
P+ +F++ + + QFN + L+ + L + +NPN++V IYYD + A YK +
Sbjct: 81 PNVVKFTVNDATLTQFNFNETNTLHYDLALNVTVRNPNRRVGIYYDTIETMAFYKDVQF- 139
Query: 110 GDSSVPPFYQGNEESNLLTASLIGNGLPVA-PSLGYEVGRDQINGRLVLNLRVIGKLRWK 168
+ ++ F+Q ++ ++ L + + E +++I+G ++ +++ ++R+K
Sbjct: 140 ANQTLGRFFQHHKNTSFLNPVFKDKQVVILNEDQNKEFDKEKIDGVYGIDFKMLIEMRFK 199
Query: 169 IGTWVSGHYRFNVNCVSVMAFGPSMLGAPLISAQGA 204
G + GH + V C L PL S G+
Sbjct: 200 FGWFKIGHAKPKVRC---------DLKVPLKSHNGS 226
>Medtr2g100060.1 | late embryogenesis abundant protein, putative |
HC | chr2:42954573-42953147 | 20130731
Length = 260
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 67/144 (46%), Gaps = 5/144 (3%)
Query: 51 PSKPQFSLKEVDIYQFNL-SGPMLNSSIQLTLLSKNPNQKVSIYYDEFQVYATYKGQRIT 109
P +P F++ + + NL S LNS + + +KNPN+ ++ Y + I
Sbjct: 89 PHRPSFTVTSLKLSYLNLTSSSTLNSKFNVNITAKNPNKHITFVYQPTTITILSNNINI- 147
Query: 110 GDSSVPPFYQGNEESNLLTASLIGNGLPVAPSLGYEVGRD--QINGRLVLNLRVIGKLRW 167
G+ ++P F G + + LL +S+ GL + E+ ++ NG L L +++ K++
Sbjct: 148 GEGTIPSFKHGKKNTTLLKSSISSTGLALESEASTELKKNMKSKNG-LALKVKLDTKVKA 206
Query: 168 KIGTWVSGHYRFNVNCVSVMAFGP 191
K+G + + V C V P
Sbjct: 207 KMGKMKTPNVGIRVTCDGVRVHVP 230
>Medtr5g076170.1 | late embryogenesis abundant hydroxyproline-rich
glycoprotein, putative | HC | chr5:32436731-32437833 |
20130731
Length = 263
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 67/140 (47%), Gaps = 3/140 (2%)
Query: 50 HPSKPQFSLKEVDIYQFNLSGP-MLNSSIQLTLLSKNPNQKVSI-YYDEFQVYATYKGQR 107
P P++S+ E+ + QF+LS L + LT+ ++NPN+K+ I Y ++ A Y +
Sbjct: 103 RPKIPKYSVDELRVTQFDLSNNNSLAVTFNLTITARNPNKKIGIDYRGGSRISAWYIDTK 162
Query: 108 ITGDSSVPPFYQGNEESNLLTASLIGNGLPVAPSLGYEVGRDQINGRLVLNLRVIGKLRW 167
+ + S+P FYQG++ +L+ L G + Q G + L L V +R
Sbjct: 163 LC-EGSLPKFYQGHKNVTVLSIPLTGQTQNATGLSSSLQQQFQSEGSVPLKLNVKQPVRI 221
Query: 168 KIGTWVSGHYRFNVNCVSVM 187
K+G F V C V+
Sbjct: 222 KLGKLKLPKINFRVRCTIVV 241
>Medtr7g106100.1 | late embryogenesis abundant protein | HC |
chr7:43100020-43099253 | 20130731
Length = 255
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 57/135 (42%), Gaps = 3/135 (2%)
Query: 51 PSKPQFSLKEVDIYQFNLSGPMLNSSIQLTLLSKNPNQKVSIYYDEFQVYATYKGQR--I 108
P P+FS+ + FNL+G LN+ +TL+ NPN+K+ I YD Y +
Sbjct: 97 PRIPEFSVNSASLTSFNLTGSGLNAKWDITLIVSNPNKKLDITYDAVAASVFYGDDEYGV 156
Query: 109 TGDSSVPPFYQGNEESNLLTASLIGNGLPVAPSLGYEVGRDQINGRLVLNLRVIGKLRWK 168
+ + PF+Q +L V S+ + + ++ G + + V+ L
Sbjct: 157 LAYTRLAPFHQPTHSKTMLRVQFEVLDYFVDNSVSFGITDGRVRGFVQFGV-VVNTLIKM 215
Query: 169 IGTWVSGHYRFNVNC 183
G + YR V C
Sbjct: 216 DGLFHPSEYRLKVTC 230
>Medtr3g104460.1 | chaperonin CPN60-like protein | HC |
chr3:48106262-48107534 | 20130731
Length = 260
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 44/87 (50%), Gaps = 6/87 (6%)
Query: 50 HPSKPQFSLKEVDIYQFNLSGPM-----LNSSIQLTLLSKNPNQKVSIYYDEFQVYATYK 104
HP +PQFS+ + I + NL P L + LTL++KNPN + +Y+ F V A
Sbjct: 87 HPHQPQFSITNLRIAKMNLKTPADSPSHLTTLFNLTLIAKNPNNHLVFFYEPFTVTAFSD 146
Query: 105 GQRITGDSSVPPFYQGNEESNLLTASL 131
+I G+ S+P F G L + L
Sbjct: 147 SVQI-GNGSLPAFDSGKNNQTSLRSVL 172