Miyakogusa Predicted Gene

Lj1g3v1049420.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1049420.1 Non Characterized Hit- tr|I1LTI8|I1LTI8_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.11238
PE,87.84,0,4-HYDROXY-3-METHYLBUT-2-EN-1-YL DIPHOSPHATE SYNTHASE,NULL;
coiled-coil,NULL; ispG_gcpE: 4-hydroxy-3-,CUFF.26714.1
         (648 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g094160.1 | 4-hydroxy-3-methylbut-2-enyl diphosphate synth...  1124   0.0  
Medtr2g094160.2 | 4-hydroxy-3-methylbut-2-enyl diphosphate synth...  1124   0.0  

>Medtr2g094160.1 | 4-hydroxy-3-methylbut-2-enyl diphosphate synthase
           | HC | chr2:40157717-40163066 | 20130731
          Length = 740

 Score = 1124 bits (2908), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 547/632 (86%), Positives = 578/632 (91%), Gaps = 27/632 (4%)

Query: 1   MATGAVPASFTNVKTWNSNLGFAKSIDFVRVADLKSIKSARTKVSIIRNSNPGQDIAELQ 60
           M  G VPASF++++T +S LGF KSIDFVRV+DL+ +KS+R KVSIIRNSNP QDIAELQ
Sbjct: 1   MVAGTVPASFSSLRTCDSGLGFGKSIDFVRVSDLQRMKSSRRKVSIIRNSNPSQDIAELQ 60

Query: 61  PASEGSPLLVPRKKYCESIQKTVRRKTNTVMVGNVAIGSEHPIRIQTMTTTDTKDVAGTV 120
           PAS+GS LLVPR+KYCES+ KTVRRKT TV VG+V IGS+HPIRIQTMTTTDTKDVAGTV
Sbjct: 61  PASKGSQLLVPRQKYCESLHKTVRRKTRTVNVGDVTIGSDHPIRIQTMTTTDTKDVAGTV 120

Query: 121 EQVMRIADKGADIVRITVQGKKEADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC 180
           EQVM+IADKGADIVRITVQGKKEADACFEIKNSLVQKNYNIPLVADIHFAP+VALRVAEC
Sbjct: 121 EQVMKIADKGADIVRITVQGKKEADACFEIKNSLVQKNYNIPLVADIHFAPTVALRVAEC 180

Query: 181 FDKIRVNPGNFADRRAQFEQLEYTEDDYQKELEHIEQVFSPLVEKCKKYGRAMRIGTNHG 240
           FDKIRVNPGNFADRRAQFE LEYTEDDYQKELEHIEQVF+PLVEKCKKYGRAMRIGTNHG
Sbjct: 181 FDKIRVNPGNFADRRAQFEILEYTEDDYQKELEHIEQVFTPLVEKCKKYGRAMRIGTNHG 240

Query: 241 SLSDRIMSYYGDSPRGMVESAFKFARICRKFDYQNFVFSMKASNPVIMVQAYRLLVAEMY 300
           SLSDRIMSYYGDSPRGMVESAF+FARICRK DY NFVFSMKASNPV+MVQAYRLLVAEMY
Sbjct: 241 SLSDRIMSYYGDSPRGMVESAFEFARICRKLDYHNFVFSMKASNPVVMVQAYRLLVAEMY 300

Query: 301 VQGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEEEIDPCRRLA 360
           VQGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEEEIDPC RLA
Sbjct: 301 VQGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEEEIDPCTRLA 360

Query: 361 NLGMRAAELQKGVAPFEEKHRHYFDFQRRSGQLPVQKEGEEVDFRGALHRDGSVLMSVTL 420
           NLG RAAELQKGVAPFEEKHRHYFDFQRRSGQLP+QKEGEEVD+RG LHRDGSVLMSV+L
Sbjct: 361 NLGTRAAELQKGVAPFEEKHRHYFDFQRRSGQLPLQKEGEEVDYRGTLHRDGSVLMSVSL 420

Query: 421 DQLKTPELLYKSLSAKLIVGMPFKVFYSILLNECLRILSNRLFAYLALYTQDLATVDSIL 480
           +QLKTPELLYKSLSAKLIVGMPFK                           DLATVDSIL
Sbjct: 421 EQLKTPELLYKSLSAKLIVGMPFK---------------------------DLATVDSIL 453

Query: 481 LRELPPVEDADSRLALKRLIDISMGVITPLSEQLTKPLPNALVLVNLKELSTGVYKLLPQ 540
           LRELPPV+D D+RLALKRL DISMGVITPLSEQLTKPLPNA+VLVNLKELSTG +KLLPQ
Sbjct: 454 LRELPPVDDVDARLALKRLNDISMGVITPLSEQLTKPLPNAIVLVNLKELSTGAHKLLPQ 513

Query: 541 GTRLVVSVRGDEPYEELEILKGVDATMLLHDLSYAEDKVSRVHAARRLFEYLSDNSLNFP 600
           GTRLVVSVRGDEPYEELEILK VDATMLLHDL Y ED++SRVHAARRLFEYLSDNSL+FP
Sbjct: 514 GTRLVVSVRGDEPYEELEILKDVDATMLLHDLPYTEDRISRVHAARRLFEYLSDNSLDFP 573

Query: 601 VIHHIQFPNGIHRDDLVIGAGSDAGSLLVDGL 632
           VIHHIQFPNGIHRDDLVIGAGS AG+LLVDGL
Sbjct: 574 VIHHIQFPNGIHRDDLVIGAGSHAGALLVDGL 605


>Medtr2g094160.2 | 4-hydroxy-3-methylbut-2-enyl diphosphate synthase
           | HC | chr2:40157632-40163203 | 20130731
          Length = 740

 Score = 1124 bits (2908), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 547/632 (86%), Positives = 578/632 (91%), Gaps = 27/632 (4%)

Query: 1   MATGAVPASFTNVKTWNSNLGFAKSIDFVRVADLKSIKSARTKVSIIRNSNPGQDIAELQ 60
           M  G VPASF++++T +S LGF KSIDFVRV+DL+ +KS+R KVSIIRNSNP QDIAELQ
Sbjct: 1   MVAGTVPASFSSLRTCDSGLGFGKSIDFVRVSDLQRMKSSRRKVSIIRNSNPSQDIAELQ 60

Query: 61  PASEGSPLLVPRKKYCESIQKTVRRKTNTVMVGNVAIGSEHPIRIQTMTTTDTKDVAGTV 120
           PAS+GS LLVPR+KYCES+ KTVRRKT TV VG+V IGS+HPIRIQTMTTTDTKDVAGTV
Sbjct: 61  PASKGSQLLVPRQKYCESLHKTVRRKTRTVNVGDVTIGSDHPIRIQTMTTTDTKDVAGTV 120

Query: 121 EQVMRIADKGADIVRITVQGKKEADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC 180
           EQVM+IADKGADIVRITVQGKKEADACFEIKNSLVQKNYNIPLVADIHFAP+VALRVAEC
Sbjct: 121 EQVMKIADKGADIVRITVQGKKEADACFEIKNSLVQKNYNIPLVADIHFAPTVALRVAEC 180

Query: 181 FDKIRVNPGNFADRRAQFEQLEYTEDDYQKELEHIEQVFSPLVEKCKKYGRAMRIGTNHG 240
           FDKIRVNPGNFADRRAQFE LEYTEDDYQKELEHIEQVF+PLVEKCKKYGRAMRIGTNHG
Sbjct: 181 FDKIRVNPGNFADRRAQFEILEYTEDDYQKELEHIEQVFTPLVEKCKKYGRAMRIGTNHG 240

Query: 241 SLSDRIMSYYGDSPRGMVESAFKFARICRKFDYQNFVFSMKASNPVIMVQAYRLLVAEMY 300
           SLSDRIMSYYGDSPRGMVESAF+FARICRK DY NFVFSMKASNPV+MVQAYRLLVAEMY
Sbjct: 241 SLSDRIMSYYGDSPRGMVESAFEFARICRKLDYHNFVFSMKASNPVVMVQAYRLLVAEMY 300

Query: 301 VQGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEEEIDPCRRLA 360
           VQGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEEEIDPC RLA
Sbjct: 301 VQGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEEEIDPCTRLA 360

Query: 361 NLGMRAAELQKGVAPFEEKHRHYFDFQRRSGQLPVQKEGEEVDFRGALHRDGSVLMSVTL 420
           NLG RAAELQKGVAPFEEKHRHYFDFQRRSGQLP+QKEGEEVD+RG LHRDGSVLMSV+L
Sbjct: 361 NLGTRAAELQKGVAPFEEKHRHYFDFQRRSGQLPLQKEGEEVDYRGTLHRDGSVLMSVSL 420

Query: 421 DQLKTPELLYKSLSAKLIVGMPFKVFYSILLNECLRILSNRLFAYLALYTQDLATVDSIL 480
           +QLKTPELLYKSLSAKLIVGMPFK                           DLATVDSIL
Sbjct: 421 EQLKTPELLYKSLSAKLIVGMPFK---------------------------DLATVDSIL 453

Query: 481 LRELPPVEDADSRLALKRLIDISMGVITPLSEQLTKPLPNALVLVNLKELSTGVYKLLPQ 540
           LRELPPV+D D+RLALKRL DISMGVITPLSEQLTKPLPNA+VLVNLKELSTG +KLLPQ
Sbjct: 454 LRELPPVDDVDARLALKRLNDISMGVITPLSEQLTKPLPNAIVLVNLKELSTGAHKLLPQ 513

Query: 541 GTRLVVSVRGDEPYEELEILKGVDATMLLHDLSYAEDKVSRVHAARRLFEYLSDNSLNFP 600
           GTRLVVSVRGDEPYEELEILK VDATMLLHDL Y ED++SRVHAARRLFEYLSDNSL+FP
Sbjct: 514 GTRLVVSVRGDEPYEELEILKDVDATMLLHDLPYTEDRISRVHAARRLFEYLSDNSLDFP 573

Query: 601 VIHHIQFPNGIHRDDLVIGAGSDAGSLLVDGL 632
           VIHHIQFPNGIHRDDLVIGAGS AG+LLVDGL
Sbjct: 574 VIHHIQFPNGIHRDDLVIGAGSHAGALLVDGL 605