Miyakogusa Predicted Gene

Lj1g3v1032200.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1032200.1 tr|A8JIG5|A8JIG5_CHLRE Predicted protein
OS=Chlamydomonas reinhardtii GN=CHLREDRAFT_180727 PE=4
SV=1,40.41,4e-18,Rhodanese,Rhodanese-like domain; Rhodanese Homology
Domain,Rhodanese-like domain; RHODANESE_3,Rhodan,CUFF.26677.1
         (235 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g092040.1 | rhodanese/cell cycle control phosphatase super...   308   4e-84
Medtr3g092040.2 | rhodanese/cell cycle control phosphatase super...   176   2e-44
Medtr4g015860.1 | rhodanese/cell cycle control phosphatase super...    50   2e-06

>Medtr3g092040.1 | rhodanese/cell cycle control phosphatase
           superfamily protein | HC | chr3:42011518-42013354 |
           20130731
          Length = 232

 Score =  308 bits (788), Expect = 4e-84,   Method: Compositional matrix adjust.
 Identities = 151/211 (71%), Positives = 168/211 (79%), Gaps = 2/211 (0%)

Query: 25  EGTREPNSWGVRERSCKTTTGQRLHSQKIARGLTIQSXXXXXXXXPAEEDWKIKRELLLQ 84
           EGTR+ NSW VR RS K T+ +       ARG+T+QS        PAEE+WK+KRELLLQ
Sbjct: 24  EGTRDQNSWCVRVRSYKPTSQK--SQLNFARGITVQSAATKPAKSPAEEEWKVKRELLLQ 81

Query: 85  KRVRSVDAKEAFRLQKENNFVILDVRPEAEFKEAHPPDAINVQIYRLIKEWTAWDXXXXX 144
           KRV+SV+ KEA RLQKENNFVILDVRPEAEFKE HPPDAINVQ+YRLIKEWTAWD     
Sbjct: 82  KRVKSVEPKEALRLQKENNFVILDVRPEAEFKEGHPPDAINVQVYRLIKEWTAWDIARRA 141

Query: 145 XXXXXXXXXXTEENPEFIQSVEAKLNKNAKIIVACSSGGTMKPTQNLPEGQQSRSLIAAY 204
                     TEENPEFI+SV  +L+KNAKIIVACS+GGTMKPTQNLP+GQQSRSLIAAY
Sbjct: 142 AFAFFGIFSGTEENPEFIKSVGEQLDKNAKIIVACSAGGTMKPTQNLPQGQQSRSLIAAY 201

Query: 205 LLVLNGYTNVFHLEGGLYSWFKEDLPSVSEE 235
           LLVLNGY NVFHLEGGLY WFKEDLP+V+EE
Sbjct: 202 LLVLNGYNNVFHLEGGLYKWFKEDLPAVAEE 232


>Medtr3g092040.2 | rhodanese/cell cycle control phosphatase
           superfamily protein | HC | chr3:42011518-42012609 |
           20130731
          Length = 191

 Score =  176 bits (446), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 89/139 (64%), Positives = 100/139 (71%), Gaps = 2/139 (1%)

Query: 25  EGTREPNSWGVRERSCKTTTGQRLHSQKIARGLTIQSXXXXXXXXPAEEDWKIKRELLLQ 84
           EGTR+ NSW VR RS K T+ +       ARG+T+QS        PAEE+WK+KRELLLQ
Sbjct: 24  EGTRDQNSWCVRVRSYKPTSQK--SQLNFARGITVQSAATKPAKSPAEEEWKVKRELLLQ 81

Query: 85  KRVRSVDAKEAFRLQKENNFVILDVRPEAEFKEAHPPDAINVQIYRLIKEWTAWDXXXXX 144
           KRV+SV+ KEA RLQKENNFVILDVRPEAEFKE HPPDAINVQ+YRLIKEWTAWD     
Sbjct: 82  KRVKSVEPKEALRLQKENNFVILDVRPEAEFKEGHPPDAINVQVYRLIKEWTAWDIARRA 141

Query: 145 XXXXXXXXXXTEENPEFIQ 163
                     TEENPEFI+
Sbjct: 142 AFAFFGIFSGTEENPEFIK 160


>Medtr4g015860.1 | rhodanese/cell cycle control phosphatase
           superfamily protein | HC | chr4:4822257-4824344 |
           20130731
          Length = 224

 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/164 (26%), Positives = 69/164 (42%), Gaps = 29/164 (17%)

Query: 79  RELLLQKRVRSVDAKEAFRLQKENNFVILDVRPEAEFKEAHPPDAINVQIY--------- 129
           R+L+    +R++  K+A  +     FV+LDVRP  E ++AH   +++V ++         
Sbjct: 50  RQLIESGTIRTILPKDASTVMNSEGFVLLDVRPNWEREKAHVKGSLHVPMFVEDKDNGPL 109

Query: 130 RLIKEWTAWDXXXXXXXXXXXXXXXTEENPEFIQSVEAKL-NKNAKIIVACSSGGTMKPT 188
            L+K+W  +                T  N EF+  VE  +  K  K++VAC         
Sbjct: 110 TLLKKWVHFG-----YIGAWTGQYLTTFNSEFLSQVENVVPGKGTKVLVAC--------- 155

Query: 189 QNLPEGQQSRSLIAAYLLVLNGYTNVFHLEGGLYSWFKEDLPSV 232
                G+  RS+ A   L   GY N+  L GG      +D   V
Sbjct: 156 -----GEGLRSMTATSKLYNGGYRNLGWLVGGFSRSKDDDFSDV 194