Miyakogusa Predicted Gene

Lj1g3v1019010.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1019010.1 tr|G7J7I6|G7J7I6_MEDTR Neuroblastoma-amplified
sequence OS=Medicago truncatula GN=MTR_3g091940 PE=4
,83.84,0,seg,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
Sec39,Secretory pathway
Sec39,NODE_33385_length_4131_cov_84.795448.path2.1
         (1383 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g091940.1 | secretory pathway protein Sec39 | HC | chr3:41...  2348   0.0  

>Medtr3g091940.1 | secretory pathway protein Sec39 | HC |
            chr3:41972301-41958493 | 20130731
          Length = 2391

 Score = 2348 bits (6084), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 1134/1384 (81%), Positives = 1226/1384 (88%), Gaps = 4/1384 (0%)

Query: 1    MPINEAARTLAESGKIGALNLLFKRHPYSLSPFMLEILASIPETVPVQTYGQLLPGRSPP 60
            MPINEAA  LAESGKIGALNLLFKRHPYSLSPF+L++LASIPETVP+Q Y QLLPGRS P
Sbjct: 572  MPINEAAVALAESGKIGALNLLFKRHPYSLSPFVLKVLASIPETVPIQMYVQLLPGRSFP 631

Query: 61   SGVAVRQDDWVECKKMVHFIKTSVENHDSQIHVKTEPLVKHFLGYFWPSIDELSNWYANR 120
            SGVAVRQDDWVECKKMV+FI TSV+NHD QI VKTEPLVKHFLG  WPSIDELS WY +R
Sbjct: 632  SGVAVRQDDWVECKKMVNFINTSVKNHDIQIQVKTEPLVKHFLGLLWPSIDELSKWYMDR 691

Query: 121  ARAMDDFSGQLDNCLSLLEFALRKGLSELQQFHQDVLYLHQIIYSDDNDSEMSFNMSLVM 180
            ARAMDDFSGQLDNCLSLLEFALRKG+SELQQFHQDVLYLHQ+IYSDDNDSE  FNMSLVM
Sbjct: 692  ARAMDDFSGQLDNCLSLLEFALRKGISELQQFHQDVLYLHQVIYSDDNDSETGFNMSLVM 751

Query: 181  WVELPDYDKFKFMLKGVKEENVTERLRNRAIPFMCEKFHRASVIGEATSSDSTNQNTEES 240
            W ELPDY+KFKFMLKGVKEENV ERL NRAIPFM EKFHR ++IGE T S  TNQN EES
Sbjct: 752  WGELPDYEKFKFMLKGVKEENVIERLHNRAIPFMREKFHRVTLIGEVTHS--TNQNLEES 809

Query: 241  FLVRWLKETASDNKLNICLVVIEEGCRNFQSNAFFKTDVEAVDCALQCIYLSTITDRWSI 300
            FLVRWLKE A  NKL++CLV+IEEGCRNFQSN +F+T+VEAVDCALQCIYL T+TDRWSI
Sbjct: 810  FLVRWLKEIALQNKLDMCLVIIEEGCRNFQSNVYFETEVEAVDCALQCIYLCTVTDRWSI 869

Query: 301  MSAILSKLPQLHDGTIAEVENLERRLRIAEGHIEAGRLLELYQVPKPLNFFLGAKSDEKG 360
            MSAILSKLPQ+HD  I + E+LE+RLR+AEGHIEAGRLL  YQVPKPLNFF GA+ DEKG
Sbjct: 870  MSAILSKLPQMHDSAI-QAESLEKRLRVAEGHIEAGRLLAFYQVPKPLNFFPGAQLDEKG 928

Query: 361  AKQIIRLILSKFIRRQPGRSDSEWASMWRDIQYLREKAFPFLDLEYTLIEFCRGLLKAGK 420
             KQIIRLILSKFIRRQPGRSDSEWASMWRD+QYLREKAFPFLDLEY LIEFCRGLLKAGK
Sbjct: 929  VKQIIRLILSKFIRRQPGRSDSEWASMWRDMQYLREKAFPFLDLEYILIEFCRGLLKAGK 988

Query: 421  FALARNYLKGTSSVALASEKAENLVIQAAREYFFSASSLSCSEIWKARECLNLYPSTGNV 480
            F+LARNYLKGTSSV+LASEKAE+LVIQAAREYFFSASSLSCSEIWKA+ECLNL PS+GNV
Sbjct: 989  FSLARNYLKGTSSVSLASEKAESLVIQAAREYFFSASSLSCSEIWKAKECLNLCPSSGNV 1048

Query: 481  KAEADIIDALTVKLPNLGVNILPVQFREIKDPMEIVKMAITNQPGAYFHVDELIEVAKLL 540
            KAEADIIDALTVKLPNLGVNILP+QFR+IKDPMEIVKMAIT+Q GAYFHVDEL+EVA+LL
Sbjct: 1049 KAEADIIDALTVKLPNLGVNILPMQFRQIKDPMEIVKMAITSQTGAYFHVDELVEVARLL 1108

Query: 541  GLRSADDXXXXXXXXXXXXXXSGDIQLAFDLCLVLAKKGHGSIWDLCAAIARGSAVENMD 600
            GLRSADD              SGD+QLAFDLCLVLA+KGHG+IWDLCAAIARG A+ENMD
Sbjct: 1109 GLRSADDISAVEEAIAREAAVSGDLQLAFDLCLVLARKGHGNIWDLCAAIARGPALENMD 1168

Query: 601  VDSRKQLLGFSLSHCDDESIGDLLVAWKDVDMQGQCETLMMATGTNSSKFSVQGSCVNSL 660
            VDSRKQLLGF+LSHCD+ESI +LL AWKD+DM GQCETL+M+TGTN S FSVQGS V SL
Sbjct: 1169 VDSRKQLLGFALSHCDEESISELLHAWKDLDMHGQCETLIMSTGTNPSNFSVQGSTVESL 1228

Query: 661  PKQRFQNTLDGNGCFQEFDNITTDNQDFHLEKIRDMLSIVAKTLAVGDGADWALGLTENG 720
             KQ FQN LD N  FQEFD  +TDNQD HLEKI+D LSIVAKTLAVG+  DWA  LTENG
Sbjct: 1229 QKQSFQNILDRNVSFQEFDANSTDNQDVHLEKIKDTLSIVAKTLAVGNLTDWASVLTENG 1288

Query: 721  KALSFAAFQLPWLIELSRKGEHNKKLSTGKQYLNIRTQAVLTILSWLARNGFSPRDDLIA 780
            K LSFAA QLPWLI+LS K   N+KLSTGKQYLNIRTQAV+TILSWLARNGF+PRD+LIA
Sbjct: 1289 KVLSFAALQLPWLIDLSNKRYLNEKLSTGKQYLNIRTQAVVTILSWLARNGFAPRDNLIA 1348

Query: 781  SLAKSIMEPPVSEEEDIMGCSYLLNLVDAFNGVEVIEEQLKIRKDYQEICSTMNVGMAYS 840
            SLA+S+MEPPV+E+EDI GCSYLLNLVDAFNGVEVIEEQLKIRKDYQEICS MNVGMAYS
Sbjct: 1349 SLARSVMEPPVTEDEDITGCSYLLNLVDAFNGVEVIEEQLKIRKDYQEICSIMNVGMAYS 1408

Query: 841  LLHNSGIGTDPAQXXXXXXXXXXXXHTSPNSDDIDKLGKVQSSFWREWKLKLEEQKRLTE 900
            LLHNSG+GTDP Q            HTSP+S+DIDKLGKVQSSFWREWKLKLEEQKRLTE
Sbjct: 1409 LLHNSGLGTDPVQRKEILKRRFKEKHTSPSSEDIDKLGKVQSSFWREWKLKLEEQKRLTE 1468

Query: 901  HSRALQKIIPGVEAERFLSGDSIYIENVVVSLIESVKLEKKHILKDILKLADTYDLNCTE 960
            HSRALQKIIPGVE ERFLS DSIYIENVV+SLIESVKLEK+HILKDIL+LADTYDL+ TE
Sbjct: 1469 HSRALQKIIPGVETERFLSRDSIYIENVVISLIESVKLEKRHILKDILRLADTYDLDSTE 1528

Query: 961  VLLRYLSAVLVFDVWTNDDLTAEVVGYKGEIISNGAKTIETISTIVYPAIDGCNKLRLAY 1020
            VLL +LSAVLV DVWTNDD+TAEV GYK EII NG KTIETIST VYPAIDGCNKLRL+Y
Sbjct: 1529 VLLHFLSAVLVSDVWTNDDITAEVAGYKEEIIGNGVKTIETISTKVYPAIDGCNKLRLSY 1588

Query: 1021 VYGLLSECYLQLETTEDLSPVVQPDHANANLRFAQYYKVIEQECKNVSFINKLNFKNIAG 1080
            VYGLLSECYLQLE T+D+SP+  P+H NAN+RFA YYKV+E+ECKNVSFIN LNFKNIAG
Sbjct: 1589 VYGLLSECYLQLENTKDISPIAHPEHENANIRFAHYYKVVEKECKNVSFINNLNFKNIAG 1648

Query: 1081 LRGLNFESFSDEVYACIEESSLSALSNMVQALVNMYGDSLPEGFMSWQDVYKYYIXXXXX 1140
            L GLNFE F DEVYACIEESSLSALS M+QA VN+YGDSLP+GFMSWQDVYKYYI     
Sbjct: 1649 LHGLNFECFGDEVYACIEESSLSALSKMIQAFVNIYGDSLPKGFMSWQDVYKYYILSSLS 1708

Query: 1141 XXETKATTD-SSRTPEFLQGFISKLEQSYDMCRMYIRFLNQSDALGITKQYFTVIMPLCS 1199
              ETKATTD SSRTPE LQGF+SKLEQSYD C  YIR LNQSDAL I KQY TVI+PL S
Sbjct: 1709 ALETKATTDSSSRTPECLQGFLSKLEQSYDSCGKYIRLLNQSDALAIMKQYLTVIVPLHS 1768

Query: 1200 SYGSLPDNSTWQECLIILLNFWIRLTDDMKEISLEESPGETNSFNPQCLMTCLKVLMKLV 1259
            SYG LPDNS WQECLI+LLNFW+RLTDDMKEISLEE+ GE  SFNPQCL +CLKV MKLV
Sbjct: 1769 SYGFLPDNSAWQECLIVLLNFWMRLTDDMKEISLEENSGEIISFNPQCLTSCLKVFMKLV 1828

Query: 1260 MEDIISPSQGWGSIYAYVNCGLSGDSTVEIYNFCQAMIFSGCGFGAISEVFSFASSETGS 1319
            MEDIISPSQGWGSIY YVNCGLSG  +VEIYNF +AM+FSGCGF AI+EVFS AS ETGS
Sbjct: 1829 MEDIISPSQGWGSIYGYVNCGLSGHCSVEIYNFSKAMVFSGCGFSAIAEVFSVASLETGS 1888

Query: 1320 ASNWGTGSPDLPHLYLDILEAALQELVNGSHESQKLYPILSSLSKLEGDLKVMQCVRHVI 1379
            +S+ GTGS DLP  Y DILEA LQELVNGSHESQ LY ILSSLSK+EGDLKV+QCVRHVI
Sbjct: 1889 SSDVGTGSQDLPRFYSDILEAVLQELVNGSHESQNLYHILSSLSKIEGDLKVLQCVRHVI 1948

Query: 1380 WEKM 1383
            WEKM
Sbjct: 1949 WEKM 1952