Miyakogusa Predicted Gene
- Lj1g3v0986640.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v0986640.1 Non Characterized Hit- tr|Q9LXF5|Q9LXF5_ARATH
Putative uncharacterized protein F8M21_160 OS=Arabidop,34.29,2e-18,no
description,NULL; K homology RNA-binding domain,K Homology domain;
KH_TYPE_1,K Homology domain, t,CUFF.26634.1
(542 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr3g091800.1 | RNA-binding KH domain protein | HC | chr3:4179... 711 0.0
Medtr3g110650.2 | RNA-binding KH domain protein | HC | chr3:5171... 197 2e-50
Medtr3g110650.1 | RNA-binding KH domain protein | HC | chr3:5171... 197 2e-50
Medtr4g093650.1 | RNA-binding KH domain protein | HC | chr4:3709... 184 2e-46
Medtr4g008080.1 | RNA-binding KH domain protein | HC | chr4:1379... 168 2e-41
Medtr2g019090.1 | RNA-binding KH domain protein | HC | chr2:6163... 155 8e-38
Medtr6g012630.4 | RNA-binding KH domain protein | HC | chr6:3864... 140 2e-33
Medtr6g012630.1 | RNA-binding KH domain protein | HC | chr6:3864... 140 2e-33
Medtr6g012630.5 | RNA-binding KH domain protein | HC | chr6:3864... 140 2e-33
Medtr6g012630.2 | RNA-binding KH domain protein | HC | chr6:3864... 140 2e-33
Medtr5g031720.1 | RNA-binding KH domain protein | HC | chr5:1360... 135 8e-32
Medtr2g019090.2 | RNA-binding KH domain protein | HC | chr2:6163... 134 3e-31
Medtr2g009650.1 | RNA-binding KH domain protein | HC | chr2:2001... 129 9e-30
Medtr7g011080.2 | RNA-binding KH domain protein | HC | chr7:2893... 124 2e-28
Medtr7g011080.1 | RNA-binding KH domain protein | HC | chr7:2893... 124 2e-28
Medtr6g012630.3 | RNA-binding KH domain protein | HC | chr6:3864... 116 6e-26
Medtr7g115340.1 | poly(rC)-binding-like protein | HC | chr7:4764... 93 7e-19
Medtr7g115340.2 | poly(rC)-binding-like protein | HC | chr7:4764... 93 8e-19
Medtr4g127380.1 | poly(rC)-binding-like protein | HC | chr4:5286... 87 4e-17
Medtr1g070380.1 | poly(rC)-binding-like protein | HC | chr1:3114... 78 2e-14
Medtr1g070380.3 | poly(rC)-binding-like protein | HC | chr1:3114... 74 5e-13
Medtr1g070380.2 | poly(rC)-binding-like protein | HC | chr1:3114... 74 5e-13
Medtr2g038020.1 | poly(rC)-binding-like protein | HC | chr2:1650... 70 4e-12
Medtr7g080630.5 | poly(rC)-binding-like protein | HC | chr7:3070... 66 7e-11
Medtr7g080630.3 | poly(rC)-binding-like protein | HC | chr7:3070... 66 8e-11
Medtr7g080630.4 | poly(rC)-binding-like protein | HC | chr7:3070... 66 8e-11
Medtr7g080630.1 | poly(rC)-binding-like protein | HC | chr7:3070... 66 8e-11
Medtr7g080630.2 | poly(rC)-binding-like protein | HC | chr7:3070... 66 8e-11
Medtr5g049770.1 | RNA-binding KH domain protein | HC | chr5:2176... 65 2e-10
>Medtr3g091800.1 | RNA-binding KH domain protein | HC |
chr3:41793839-41789438 | 20130731
Length = 646
Score = 711 bits (1834), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/554 (67%), Positives = 430/554 (77%), Gaps = 25/554 (4%)
Query: 3 GDEERIIEISDTRRQDPDRRMPSFSPAQEALLMIHERILXXXXXXXXXXXXXXXXXXXXX 62
GDEERIIEISDTRR+DPD RMP FSPAQEALL+IHER+L
Sbjct: 104 GDEERIIEISDTRRRDPDGRMPQFSPAQEALLLIHERLLENDPGFEDEEDYGGGRGGGGK 163
Query: 63 XXXXXXXXXXXXXXXMHVGCLMGKGGKIIEQMRMETKTQIRILPRDHNLPRCVSMSEEIV 122
MHVG L+GKGGKIIEQMR+ETKTQIRILPRD LPRCVSMSEEIV
Sbjct: 164 RVSSRLVVSK-----MHVGSLLGKGGKIIEQMRIETKTQIRILPRDSYLPRCVSMSEEIV 218
Query: 123 QVTGDVNAVKNALEVISSRLRESQX--------XXXXXXXXXXXSPERFFSPDDDYIP-- 172
QVTGD++ VKNA VISSRLRESQ SPERFF PDDDY+P
Sbjct: 219 QVTGDIHNVKNAFLVISSRLRESQHRDRSGERGGGGGQFHGRGHSPERFFPPDDDYLPHV 278
Query: 173 ----RRSSMDRPGFGSRIATTNTRNNSHSSLGYAMEQGAPPVADDAQPLYGEDIVFRILC 228
RR S++R GFGSRIATTN+RNN+H+S+ Y+M+QGA PVA D QP Y ED++FRILC
Sbjct: 279 SSGSRRPSVERSGFGSRIATTNSRNNNHASISYSMDQGAAPVAHDEQPFY-EDLIFRILC 337
Query: 229 PVEKVDRIIGESDGIVEFLQNEVGVDVRVINPVGGSNEQIVIVTSEEGPDDVLFPAQEAL 288
PV++VDRI+GES GI+E LQ+ VGVDV++ + VGGS+EQ+VI+TSEEGP+D +FPAQEAL
Sbjct: 338 PVDRVDRIVGESGGILELLQDRVGVDVQISDRVGGSDEQMVIITSEEGPNDTMFPAQEAL 397
Query: 289 LHIQTRIVDLVLDKDNFITTRLVVPSSYIECLDGKDASLSEIRRLTGANIQILPREELPS 348
LHIQT IVDL D+ ITTRL+VPSS IECLDGK+ASLSEI R TGA++QILPREELP
Sbjct: 398 LHIQTHIVDL---SDSIITTRLIVPSSDIECLDGKNASLSEIERSTGASVQILPREELPP 454
Query: 349 CVAKTDELVQIVGEIKAARDAVVEVTSRLRSYLYRDFFQRDIVPPSASLPGFEASSSNNI 408
C+A TDELVQIVGEI+AAR+ +++VT++LRSY+YRD Q D VPPSA LP EASSSN++
Sbjct: 455 CIANTDELVQIVGEIEAARNVILDVTAKLRSYVYRDILQWDTVPPSAPLPSVEASSSNSM 514
Query: 409 SLVAETSSIYQNVQSMAAALPSKESGGSSFEAGKQKESDRGDDVLGSLNRLAVPLVTRST 468
+ VAET++ QN+QS+A AL SKESGGS+ E GKQKESDR DD+ LNR V LVTRS
Sbjct: 515 ATVAETATANQNMQSVAVALASKESGGST-EMGKQKESDRRDDLPTGLNR-TVSLVTRSI 572
Query: 469 LEVVIPEYAVPKLTAKSRSKLAQISELSGANVTLVEDRPDVTQKIIQISGTPEQAERAQS 528
LEVVIPEYAVPKL AKS+SKLAQISELSGANV LVEDRPD +KIIQISGTPEQAER QS
Sbjct: 573 LEVVIPEYAVPKLLAKSKSKLAQISELSGANVKLVEDRPDEKEKIIQISGTPEQAERGQS 632
Query: 529 LLQGFILSTQEDGP 542
LLQGFILSTQEDGP
Sbjct: 633 LLQGFILSTQEDGP 646
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 100/181 (55%), Gaps = 20/181 (11%)
Query: 224 FRILCPVEKVDRIIGESDGIVEFLQNEVGVDVRVINPVGGSNEQIVIV--TSEEGPDDVL 281
+R+LC + +IG+S I++ ++ G + V PV G E+I+ + T PD +
Sbjct: 65 YRLLCHDLRAGGVIGKSGSIIKSIRQHTGAWINVHEPVAGDEERIIEISDTRRRDPDGRM 124
Query: 282 ---FPAQEALLHIQTRIVDL---VLDKDNF----------ITTRLVVPSSYIECLDGKDA 325
PAQEALL I R+++ D++++ +++RLVV ++ L GK
Sbjct: 125 PQFSPAQEALLLIHERLLENDPGFEDEEDYGGGRGGGGKRVSSRLVVSKMHVGSLLGKGG 184
Query: 326 SLSEIRRL-TGANIQILPREE-LPSCVAKTDELVQIVGEIKAARDAVVEVTSRLRSYLYR 383
+ E R+ T I+ILPR+ LP CV+ ++E+VQ+ G+I ++A + ++SRLR +R
Sbjct: 185 KIIEQMRIETKTQIRILPRDSYLPRCVSMSEEIVQVTGDIHNVKNAFLVISSRLRESQHR 244
Query: 384 D 384
D
Sbjct: 245 D 245
>Medtr3g110650.2 | RNA-binding KH domain protein | HC |
chr3:51710144-51714718 | 20130731
Length = 662
Score = 197 bits (501), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 151/509 (29%), Positives = 253/509 (49%), Gaps = 67/509 (13%)
Query: 79 HVGCLMGKGGKIIEQMRMETKTQIRILPRDHNLPRCVSMSEEIVQVTGDVNAVKNALEVI 138
VGC++GKGG +I++M E+ QIRILP++ +P C S S+E+VQ+TG V V+ AL+ +
Sbjct: 175 QVGCILGKGGSVIKRMSAESGAQIRILPKEE-IPACASDSDELVQITGGVEVVRRALQSV 233
Query: 139 SSRLRESQXXXXXXXXXXXXSPERFFSPDDDYIPRRSSMDRPGFGSRIATT-NTRNNSHS 197
+L E+ P + P + + G G+ AT N HS
Sbjct: 234 FQQLVENSPRDHESLPTNLTGPSSHSY--GQFPPNKRTFA--GQGASFATGPNEIPVFHS 289
Query: 198 S-LGYAMEQGAPPVADDAQPLYGEDIVFRILCPVEKVDRIIGESDGIVEFLQNEVGVDVR 256
+ + +GA + +P E + FR+LCP E V +IG+ I++ LQ E +++
Sbjct: 290 APMIPKFHEGA--ILGRMRPPP-EILTFRLLCPSESVGNLIGKGGSIIKMLQQETASEIK 346
Query: 257 VINPVGGSNEQIVIVTSEEGPDDVLFPAQEALLHIQTRIVDLVLD-KDNFITTRLVVPSS 315
VI + GS + I+I++ PDD + P QEA+ +Q RI +LD K++ + R++V S
Sbjct: 347 VIEAIPGSEDCIIIISGPAHPDDRISPVQEAIFRVQNRISRAMLDSKEHSMLARVIVSSK 406
Query: 316 YIECLDGKDAS-LSEIRRLTGANIQILPREELPSCVAKTDELVQIVGEIKAARDAVVEVT 374
+I CL GK S ++E+R L+GA+I++L +++ P CV++ DE++Q+ G I+A DA++++T
Sbjct: 407 HIGCLLGKGGSIIAEMRNLSGAHIRMLGKDKGPKCVSEDDEVIQVSGVIEAVHDALLQIT 466
Query: 375 SRLRSYLYRDFFQRDIVPPSASLPGFEASSSNNISLVAETSSIYQNVQSMAAALPSKESG 434
+RLR+ +RD F PSA+ P +N + + + S + + P S
Sbjct: 467 TRLRNNFFRDAF------PSANFP-------SNSAFLDQHSPFPPYLGRRGLSPPGMYSD 513
Query: 435 GSSFEAGKQKESDRGDDVLGSLNRLAV-PLVT-------RSTLE----VVIPEYA----- 477
D + ++ R + PL++ + LE + +PE+A
Sbjct: 514 LGPRHPHADFPLDDHPPFMNNMYRSGIPPLISERKPWGPKGILEGGGHMGLPEFAGGPRR 573
Query: 478 -----------VPKLTAKSRSKLAQISELSGAN--------------VTLVEDRPDVTQK 512
+ T + A ++E+ G N V + + P +
Sbjct: 574 ISGFAGGSQPIITSTTVEVVVPRALVAEIYGENGECLKQILQISDANVIITDPIPGAVET 633
Query: 513 IIQISGTPEQAERAQSLLQGFILSTQEDG 541
I ISGTPEQ AQSL+Q F++S +E G
Sbjct: 634 KIIISGTPEQTNAAQSLIQAFVMSERESG 662
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 102/234 (43%), Gaps = 34/234 (14%)
Query: 302 KDNFITTRLVVPSSYIECLDGKDASLSEIRRLT---GANIQILPREELPSCVAKTDELVQ 358
K + RL++ S+ + C+ GK S+ I+R++ GA I+ILP+EE+P+C + +DELVQ
Sbjct: 161 KKGYFGLRLLILSNQVGCILGKGGSV--IKRMSAESGAQIRILPKEEIPACASDSDELVQ 218
Query: 359 IVGEIKAARDAVVEVTSRLRSYLYRDFFQRDIVPPSASLPGFEASSSNNISLVAETSSIY 418
I G ++ R A+ V +L RD SLP +L +S Y
Sbjct: 219 ITGGVEVVRRALQSVFQQLVENSPRDH---------ESLP---------TNLTGPSSHSY 260
Query: 419 Q----NVQSMAAALPSKESGGSS---FEAGKQKESDRGDDVLGSLNRLAVPLVTRSTLEV 471
N ++ A S +G + F + +LG + P T +
Sbjct: 261 GQFPPNKRTFAGQGASFATGPNEIPVFHSAPMIPKFHEGAILGRMR----PPPEILTFRL 316
Query: 472 VIPEYAVPKLTAKSRSKLAQISELSGANVTLVEDRPDVTQKIIQISGTPEQAER 525
+ P +V L K S + + + + + + ++E P II ISG +R
Sbjct: 317 LCPSESVGNLIGKGGSIIKMLQQETASEIKVIEAIPGSEDCIIIISGPAHPDDR 370
>Medtr3g110650.1 | RNA-binding KH domain protein | HC |
chr3:51710144-51714718 | 20130731
Length = 662
Score = 197 bits (501), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 151/509 (29%), Positives = 253/509 (49%), Gaps = 67/509 (13%)
Query: 79 HVGCLMGKGGKIIEQMRMETKTQIRILPRDHNLPRCVSMSEEIVQVTGDVNAVKNALEVI 138
VGC++GKGG +I++M E+ QIRILP++ +P C S S+E+VQ+TG V V+ AL+ +
Sbjct: 175 QVGCILGKGGSVIKRMSAESGAQIRILPKEE-IPACASDSDELVQITGGVEVVRRALQSV 233
Query: 139 SSRLRESQXXXXXXXXXXXXSPERFFSPDDDYIPRRSSMDRPGFGSRIATT-NTRNNSHS 197
+L E+ P + P + + G G+ AT N HS
Sbjct: 234 FQQLVENSPRDHESLPTNLTGPSSHSY--GQFPPNKRTFA--GQGASFATGPNEIPVFHS 289
Query: 198 S-LGYAMEQGAPPVADDAQPLYGEDIVFRILCPVEKVDRIIGESDGIVEFLQNEVGVDVR 256
+ + +GA + +P E + FR+LCP E V +IG+ I++ LQ E +++
Sbjct: 290 APMIPKFHEGA--ILGRMRPPP-EILTFRLLCPSESVGNLIGKGGSIIKMLQQETASEIK 346
Query: 257 VINPVGGSNEQIVIVTSEEGPDDVLFPAQEALLHIQTRIVDLVLD-KDNFITTRLVVPSS 315
VI + GS + I+I++ PDD + P QEA+ +Q RI +LD K++ + R++V S
Sbjct: 347 VIEAIPGSEDCIIIISGPAHPDDRISPVQEAIFRVQNRISRAMLDSKEHSMLARVIVSSK 406
Query: 316 YIECLDGKDAS-LSEIRRLTGANIQILPREELPSCVAKTDELVQIVGEIKAARDAVVEVT 374
+I CL GK S ++E+R L+GA+I++L +++ P CV++ DE++Q+ G I+A DA++++T
Sbjct: 407 HIGCLLGKGGSIIAEMRNLSGAHIRMLGKDKGPKCVSEDDEVIQVSGVIEAVHDALLQIT 466
Query: 375 SRLRSYLYRDFFQRDIVPPSASLPGFEASSSNNISLVAETSSIYQNVQSMAAALPSKESG 434
+RLR+ +RD F PSA+ P +N + + + S + + P S
Sbjct: 467 TRLRNNFFRDAF------PSANFP-------SNSAFLDQHSPFPPYLGRRGLSPPGMYSD 513
Query: 435 GSSFEAGKQKESDRGDDVLGSLNRLAV-PLVT-------RSTLE----VVIPEYA----- 477
D + ++ R + PL++ + LE + +PE+A
Sbjct: 514 LGPRHPHADFPLDDHPPFMNNMYRSGIPPLISERKPWGPKGILEGGGHMGLPEFAGGPRR 573
Query: 478 -----------VPKLTAKSRSKLAQISELSGAN--------------VTLVEDRPDVTQK 512
+ T + A ++E+ G N V + + P +
Sbjct: 574 ISGFAGGSQPIITSTTVEVVVPRALVAEIYGENGECLKQILQISDANVIITDPIPGAVET 633
Query: 513 IIQISGTPEQAERAQSLLQGFILSTQEDG 541
I ISGTPEQ AQSL+Q F++S +E G
Sbjct: 634 KIIISGTPEQTNAAQSLIQAFVMSERESG 662
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 102/234 (43%), Gaps = 34/234 (14%)
Query: 302 KDNFITTRLVVPSSYIECLDGKDASLSEIRRLT---GANIQILPREELPSCVAKTDELVQ 358
K + RL++ S+ + C+ GK S+ I+R++ GA I+ILP+EE+P+C + +DELVQ
Sbjct: 161 KKGYFGLRLLILSNQVGCILGKGGSV--IKRMSAESGAQIRILPKEEIPACASDSDELVQ 218
Query: 359 IVGEIKAARDAVVEVTSRLRSYLYRDFFQRDIVPPSASLPGFEASSSNNISLVAETSSIY 418
I G ++ R A+ V +L RD SLP +L +S Y
Sbjct: 219 ITGGVEVVRRALQSVFQQLVENSPRDH---------ESLP---------TNLTGPSSHSY 260
Query: 419 Q----NVQSMAAALPSKESGGSS---FEAGKQKESDRGDDVLGSLNRLAVPLVTRSTLEV 471
N ++ A S +G + F + +LG + P T +
Sbjct: 261 GQFPPNKRTFAGQGASFATGPNEIPVFHSAPMIPKFHEGAILGRMR----PPPEILTFRL 316
Query: 472 VIPEYAVPKLTAKSRSKLAQISELSGANVTLVEDRPDVTQKIIQISGTPEQAER 525
+ P +V L K S + + + + + + ++E P II ISG +R
Sbjct: 317 LCPSESVGNLIGKGGSIIKMLQQETASEIKVIEAIPGSEDCIIIISGPAHPDDR 370
>Medtr4g093650.1 | RNA-binding KH domain protein | HC |
chr4:37099130-37092340 | 20130731
Length = 616
Score = 184 bits (467), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 145/506 (28%), Positives = 250/506 (49%), Gaps = 62/506 (12%)
Query: 79 HVGCLMGKGGKIIEQMRMETKTQIRILPRDHNLPRCVSMSEEIVQVTGDVNAVKNALEVI 138
G ++GKGG ++ ++R +T +IR+L + LP C S+EI+++ G ++VK AL +
Sbjct: 122 QAGGVIGKGGMVVAKIRADTGCRIRVL--NDKLPACTKPSDEIIEIQGIASSVKKALVAV 179
Query: 139 SSRLRESQXXXXXXXXXXXXSPERFFSPDDDYIPRRSSMD-----RPGFGSRIATTNTRN 193
+ RL++ P F + +P D R S I+T++ R+
Sbjct: 180 AGRLQDCPPLDRTKMMGTR--PYEAFQNETSAVPHEGLTDLNMDFRLQRSSAISTSSIRS 237
Query: 194 NSHSSLGYAMEQGAPPVADDAQPLYGEDIVFRILCPVEKVDRIIGESDGIVEFLQNEVGV 253
N S + + V+ +++ FRILC +++ ++G+ IV+ LQNE G
Sbjct: 238 NGVPSKSHPLSVEDNRVSSLDPEALKQEVTFRILCSGDRIGAVLGKGGSIVKALQNETGA 297
Query: 254 DVRVINPVGGSNEQIVIVTSEEGPDDVLFPAQEALLHIQTR--------IVDLVLDKDNF 305
++ V PV ++++ +T+ E P+ PAQEA++ + R +VD +K++
Sbjct: 298 NISVGPPVVECEDRLITITALENPESRFSPAQEAVVLVFCRSIECCIEKVVDWRSNKESS 357
Query: 306 ITTRLVVPSSYIECLDGKDASL-SEIRRLTGANIQILPREELPSCVAKTDELVQIVGEIK 364
+T +LVVPS+ + L GK ++ SE+R+ T +I+I E+P C + D++VQI GE+
Sbjct: 358 VTAQLVVPSNQVGVLLGKGGAIVSEMRKATWTSIRITRNGEVPKCASFNDQVVQISGELP 417
Query: 365 AARDAVVEVTSRLRSYL------------YRDFFQRDIVPPSASLPGFEASSSNNISLVA 412
RDA+ T RLR ++ YR RD +P L G SN+
Sbjct: 418 NVRDALYNATRRLRDHIFLIAQNSGGTGPYRR--PRDSIP--LGLGGQSVVGSNH----- 468
Query: 413 ETSSIYQNVQSMAAALPSKESGGSSF------------------EAGKQKESDRGDDVLG 454
SI+ QSM S+ SG S+ +AG++ GD L
Sbjct: 469 -GPSIHSLSQSMDHLTLSRNSGRSASSGVWAPKVVGGKNSRYTDDAGRRLNPREGDLELA 527
Query: 455 SLNRLAV---PLVTRSTLEVVIPEYAVPKLTAKSRSKLAQISELSGANVTLVEDRPDVTQ 511
S + + ++T +T+E+++P + + ++ S L Q+ ++SGA V E RP +
Sbjct: 528 SGSNTVIGNAAIITNTTVEIMLPNDIIGSVYGENGSNLDQLRQISGAKVVFHEPRPGTSD 587
Query: 512 KI-IQISGTPEQAERAQSLLQGFILS 536
+ I +SGTP++ + AQSLLQ +IL+
Sbjct: 588 RAKIVLSGTPDETQAAQSLLQAYILN 613
Score = 79.3 bits (194), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 90/166 (54%), Gaps = 10/166 (6%)
Query: 222 IVFRILCPVEKVDRIIGESDGIVEFLQNEVGVDVRVIN-PVGGSNEQIVIVTSEEGPDDV 280
+VFR+LC ++ IG+S +++ LQ G +R+ + PV IV++ + G DV
Sbjct: 20 VVFRLLCHASRIGAFIGKSGSVIKSLQQLTGARIRIDDAPVDCPERVIVVIVNLNGDGDV 79
Query: 281 LFPAQEALLHIQTRIVDLVLDK-------DNFITTRLVVPSSYIECLDGKDAS-LSEIRR 332
QEALL + RI+D+ + D ++ RL+V + + GK +++IR
Sbjct: 80 SLNPQEALLKVFERILDVAAAESDGNGVGDRVVSCRLLVNAGQAGGVIGKGGMVVAKIRA 139
Query: 333 LTGANIQILPREELPSCVAKTDELVQIVGEIKAARDAVVEVTSRLR 378
TG I++L ++LP+C +DE+++I G + + A+V V RL+
Sbjct: 140 DTGCRIRVL-NDKLPACTKPSDEIIEIQGIASSVKKALVAVAGRLQ 184
>Medtr4g008080.1 | RNA-binding KH domain protein | HC |
chr4:1379696-1384039 | 20130731
Length = 605
Score = 168 bits (425), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 108/363 (29%), Positives = 190/363 (52%), Gaps = 57/363 (15%)
Query: 80 VGCLMGKGGKIIEQMRMETKTQIRILPRDHN-LPRCVSMSEEIVQVTGDVNAVKNALEVI 138
VGC++G+GGKI+E++R E+ Q+RILP+DH+ +P +E +Q+TG+ NAVK AL +
Sbjct: 110 VGCVLGRGGKIVEKIRQESGAQVRILPKDHSPIP---PPGDEFIQITGNFNAVKKALLAV 166
Query: 139 SSRLRE----SQXXXXXXXXXXXXSPERFFSPDDDYIPRRSSMDRPGFGSRIATTNTRNN 194
SS L++ S P+R P D
Sbjct: 167 SSCLQDNVGNSGGFKSSGGAQVEPYPQRGPHPPD-------------------------- 200
Query: 195 SHSSLGYAMEQGAPPVADDAQPLY----GEDIVFRILCPVEKVDRIIGESDGIVEFLQNE 250
H S GY+ + P +++A+P + E++V+++LC +KV +IG+ +V LQNE
Sbjct: 201 -HHSRGYS----SFPGSENARPAHRMFVEEEVVYKMLCQQDKVGSLIGKGGSVVRALQNE 255
Query: 251 VGVDVRVINPVGGSNEQIVIVTSEEGPDDVLFPAQEALLHIQTRIVDLVLDKDNFITTRL 310
G +++++ S+E++V++++ E D PAQ+A++ + R+ ++ + N + RL
Sbjct: 256 TGASIQIVDAGPDSDERVVVISALENSDQKHSPAQDAVIRVHGRLTEIGFEHSNAVVARL 315
Query: 311 VVPSSYIECLDGKDAS-LSEIRRLTGANIQILPREELPSCVAKTDELVQIVGEIKAARDA 369
+V S + CL GK +SE+RR+TGANI+I +E++ ++ +E+VQ++G +++ +DA
Sbjct: 316 LVRSPQVGCLLGKGGHVISEMRRVTGANIRIFSKEQI-KYISHNEEVVQVIGTLQSVQDA 374
Query: 370 VVEVTSRLRSYLYRDFFQRDIVPPSASLPGFEASSSNNISLVAETSSIYQNVQSMAAALP 429
+ +TSR+R I+P + P F A +Y+ M LP
Sbjct: 375 LFHITSRIR---------ETIIPMKNTPPNFGAPPPVPPFPDTPPPPLYRPRNHM---LP 422
Query: 430 SKE 432
S
Sbjct: 423 SGH 425
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 84/165 (50%), Gaps = 17/165 (10%)
Query: 221 DIVFRILCPVEKVDRIIGESDGIVEFLQNEVGVDVRVINPVGGSNEQIVIVTSEEGPDDV 280
D VFRILCP K D ++ S V+ L ++ DV S+E+IV++ S
Sbjct: 17 DTVFRILCPAAKSDSLLSLSGDGVKILIDDFAGDVT------SSDERIVVIISAA---AE 67
Query: 281 LFPAQEALLHIQTRIVD------LVLDKDNFITTRLVVPSSYIECLDGKDASLSE-IRRL 333
AQ AL+ + RIV+ ++ + RL+ PS + C+ G+ + E IR+
Sbjct: 68 ESAAQLALIRVFERIVEKDNNEENNKKSNSSVGCRLLAPSYQVGCVLGRGGKIVEKIRQE 127
Query: 334 TGANIQILPREELPSCVAKTDELVQIVGEIKAARDAVVEVTSRLR 378
+GA ++ILP++ P DE +QI G A + A++ V+S L+
Sbjct: 128 SGAQVRILPKDHSP-IPPPGDEFIQITGNFNAVKKALLAVSSCLQ 171
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 42/71 (59%)
Query: 465 TRSTLEVVIPEYAVPKLTAKSRSKLAQISELSGANVTLVEDRPDVTQKIIQISGTPEQAE 524
S +E+ IP + + ++ S L QI ++SGANV + + P T+ ++ +SGT +Q
Sbjct: 529 NNSPVEITIPHMYLIHVYGENNSTLNQIRQISGANVVIHDPIPGATEGLVIVSGTQDQIH 588
Query: 525 RAQSLLQGFIL 535
AQ L+QGFI
Sbjct: 589 SAQCLIQGFIF 599
>Medtr2g019090.1 | RNA-binding KH domain protein | HC |
chr2:6163835-6158039 | 20130731
Length = 631
Score = 155 bits (393), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 137/489 (28%), Positives = 233/489 (47%), Gaps = 50/489 (10%)
Query: 83 LMGKGGKIIEQMRMETKTQIRILPRDHNLP-RCVSMSEEIVQVTGDVNAVKNALEVISSR 141
L+GK G I+Q+R++T+T I+++P+D P +M + + G+ AVK AL +S+
Sbjct: 159 LIGKAGATIKQLRVKTRTNIKVVPKDAADPEHSCAMEFDNFVLVGESEAVKRALFAVSTI 218
Query: 142 LRE-SQXXXXXXXXXXXXSPERFFSPDD-------DYIPRRSSMDRPGFGSRIATTNTRN 193
+ + S +P P + P + +P ++ T
Sbjct: 219 MYKFSPKEDIPLDTTVPETPHSIIIPSELPIYPPGGLYPASDPIVQPRSFPQLIGATTMQ 278
Query: 194 NSHSSLGYAMEQGAPPVADDAQPLYG-------EDIVFRILCPVEKVDRIIGESDGIVEF 246
+ H GYA P+ P+ E+++ R+LCP +K+ ++IG+ G ++
Sbjct: 279 DLHG--GYADTGNTWPLYSSPLPVVSSLGASQSEELIVRMLCPSDKIGQLIGKGGGTIKR 336
Query: 247 LQNEVGVDVRVINPVGGSNEQIVIVTSEEGPDDVLFPAQEALLHIQTRIVDLVLDKDNFI 306
++ G + V + +E ++ +T+ E D+ A EA+L +Q +I D + D +
Sbjct: 337 MRQASGARIEVDDSKARHDECLITITATESTSDLKSVAVEAVLLLQEKIND---EDDAPV 393
Query: 307 TTRLVVPSSYIECLDGKDASL-SEIRRLTGANIQILPREELPSCVAKTDELVQIVGEIKA 365
+ RL+VPS I C+ G+ ++ +EIR+ T A+IQI R P DELV++VGE+
Sbjct: 394 SIRLLVPSKVIGCIIGRSGAIINEIRKRTKADIQI-SRSNKPKYADDNDELVEVVGEVDC 452
Query: 366 ARDAVVEVTSRLRSYLYRDF---FQRDIVPPSASLPGFEASSSNNISLVAETSSIYQNVQ 422
RDA++++ RLR + ++ R I S ASSS V + ++
Sbjct: 453 VRDALIQIVLRLREDVLKNKDIDHNRHIGSES-----LYASSS-----VLSAPPMLSSIP 502
Query: 423 SMAAALPSKESGGSSFEAGKQKE-SDRG-------DDVLGSLNRLAVPLVTR------ST 468
+ A AL + GS G S G D+ GS++ A L ST
Sbjct: 503 ATAPALAYDQRTGSGTGLGMHSSRSHYGYDSYSMEDNGYGSMSSYATNLYEGHRLPPLST 562
Query: 469 LEVVIPEYAVPKLTAKSRSKLAQISELSGANVTLVEDRPDVTQKIIQISGTPEQAERAQS 528
LE+V+P AV K+ K + LA I ++SGA V + E + ++ ISGT E+ A++
Sbjct: 563 LEMVVPANAVGKVMGKGGANLANIRKISGATVEISESKSYRGDRVALISGTSEEKRAAEN 622
Query: 529 LLQGFILST 537
L+Q FI++T
Sbjct: 623 LIQAFIMAT 631
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 102/206 (49%), Gaps = 35/206 (16%)
Query: 219 GEDIVFRILCPVEKVDRIIGESDGIVEFLQNEVGVDVRVINPVGGSNEQIVIV------- 271
GE I +RILCP E + +IG++ ++ ++ E V+V++P G+ +++ +
Sbjct: 39 GELIAYRILCPNEVIGSVIGKNGKVINSIRQESRAKVKVVDPFPGAKHRVITIFCHVKNK 98
Query: 272 --------TSEEGPDDVLFPAQEALLHIQTRIVDLV-------LDKDNFITTRLVVPSSY 316
E P L AQ+AL+ + + I + + + N +++VPSS
Sbjct: 99 EEIEIEDEFDNEKP---LCAAQDALIKVHSAISNSIETAGDSEKKRKNKDECQILVPSSQ 155
Query: 317 IECLDGK-DASLSEIRRLTGANIQILPREEL---PSCVAKTDELVQIVGEIKAARDAVVE 372
L GK A++ ++R T NI+++P++ SC + D V +VGE +A + A+
Sbjct: 156 SAILIGKAGATIKQLRVKTRTNIKVVPKDAADPEHSCAMEFDNFV-LVGESEAVKRALFA 214
Query: 373 VTSRLRSYLYRDFFQRDIVPPSASLP 398
V+ + +Y+ F ++ +P ++P
Sbjct: 215 VS----TIMYK-FSPKEDIPLDTTVP 235
>Medtr6g012630.4 | RNA-binding KH domain protein | HC |
chr6:3864952-3867538 | 20130731
Length = 538
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 122/414 (29%), Positives = 204/414 (49%), Gaps = 53/414 (12%)
Query: 1 MPGDEERIIEISDTRRQ-----DPDRRMPSFSPAQEALLMIHERILXXXXXXXXXXXXXX 55
+PG +ER++ + + + D D+ + SPA++AL IH+R++
Sbjct: 86 VPGCDERVVTVYSSSDETNTVDDGDKLV---SPAEDALFKIHDRVVAEDLHSDQEEEGGP 142
Query: 56 XXXXXXXXXXXXXXXXXXXXXXMHVGCLMGKGGKIIEQMRMETKTQIRILPRDHNLPRCV 115
+GC++GKGG+I++ +R ET QIRIL DH +P C
Sbjct: 143 QVNAKLLVPSD------------QIGCVLGKGGQIVQNLRSETGAQIRILKDDH-VPACA 189
Query: 116 SMSEEIVQVTGDVNAVKNALEVISSRLRESQXXXXXXXXXXXXSPERFFSPDDDYIPRRS 175
S+E+VQ++GD VK AL I+SRL + S P
Sbjct: 190 LRSDELVQISGDAAVVKKALHQIASRLHHNPSRTQHLLGSAVPS----------VYPSGG 239
Query: 176 SMDRPGFGSRIATTNTRNNSHSSLGYAMEQG-APPVADDAQPL----YGEDIVFRILCPV 230
S+ P G I + GY + G PP + + P ++ R++CP
Sbjct: 240 SLMGPTAGPPIVGMAPLVGPYG--GYKSDTGDWPPRSMYSAPRDEISSSKEFSVRLVCPT 297
Query: 231 EKVDRIIGESDGIVEFLQNEVGVDVRVINPVGGSNEQIVIVTSEEGPDDVLFPAQEALLH 290
+ +IG+ GI+ ++ + G ++V + G ++ ++ ++++E ++ P EA +
Sbjct: 298 GNLGGVIGKGGGIINQIRQDSGATIKVDSSAKG-DDCLITISTKEFFEETFSPTVEAAVL 356
Query: 291 IQTRIVDLVLDKDNFI---TTRLVVPSSYIECLDGKDASL-SEIRRLTGANIQILPREEL 346
+Q R + ++D+ I TTRL+V SS I CL GK S+ +E+RRLT +NI+IL +E L
Sbjct: 357 LQPRCSEKS-ERDSGIISFTTRLLVSSSRIGCLIGKGGSIITEMRRLTKSNIRILSKENL 415
Query: 347 PSCVAKTDELVQIVGEIKAARDAVVEVTSRLRSYLYRDFFQRDIVPPSASLPGF 400
P + DE+VQI G++ A+DA+V+V +RLR+ L F R+ ++PGF
Sbjct: 416 PKIASDDDEMVQISGDLDVAKDALVQVLTRLRANL----FDRE-----GAVPGF 460
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/173 (35%), Positives = 96/173 (55%), Gaps = 14/173 (8%)
Query: 220 EDIVFRILCPVEKVDRIIGESDGIVEFLQNEVGVDVRVINPVGGSNEQIVIVTSE----- 274
ED VFR LCP K+ IIG IV+ L+ E +R+ V G +E++V V S
Sbjct: 45 EDTVFRYLCPGRKIGSIIGRGGEIVKQLRVETKAKIRIGETVPGCDERVVTVYSSSDETN 104
Query: 275 --EGPDDVLFPAQEALLHIQTRIV--DLVLDKDN----FITTRLVVPSSYIECLDGKDAS 326
+ D ++ PA++AL I R+V DL D++ + +L+VPS I C+ GK
Sbjct: 105 TVDDGDKLVSPAEDALFKIHDRVVAEDLHSDQEEEGGPQVNAKLLVPSDQIGCVLGKGGQ 164
Query: 327 LSE-IRRLTGANIQILPREELPSCVAKTDELVQIVGEIKAARDAVVEVTSRLR 378
+ + +R TGA I+IL + +P+C ++DELVQI G+ + A+ ++ SRL
Sbjct: 165 IVQNLRSETGAQIRILKDDHVPACALRSDELVQISGDAAVVKKALHQIASRLH 217
>Medtr6g012630.1 | RNA-binding KH domain protein | HC |
chr6:3864952-3868465 | 20130731
Length = 553
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 122/414 (29%), Positives = 204/414 (49%), Gaps = 53/414 (12%)
Query: 1 MPGDEERIIEISDTRRQ-----DPDRRMPSFSPAQEALLMIHERILXXXXXXXXXXXXXX 55
+PG +ER++ + + + D D+ + SPA++AL IH+R++
Sbjct: 86 VPGCDERVVTVYSSSDETNTVDDGDKLV---SPAEDALFKIHDRVVAEDLHSDQEEEGGP 142
Query: 56 XXXXXXXXXXXXXXXXXXXXXXMHVGCLMGKGGKIIEQMRMETKTQIRILPRDHNLPRCV 115
+GC++GKGG+I++ +R ET QIRIL DH +P C
Sbjct: 143 QVNAKLLVPSD------------QIGCVLGKGGQIVQNLRSETGAQIRILKDDH-VPACA 189
Query: 116 SMSEEIVQVTGDVNAVKNALEVISSRLRESQXXXXXXXXXXXXSPERFFSPDDDYIPRRS 175
S+E+VQ++GD VK AL I+SRL + S P
Sbjct: 190 LRSDELVQISGDAAVVKKALHQIASRLHHNPSRTQHLLGSAVPS----------VYPSGG 239
Query: 176 SMDRPGFGSRIATTNTRNNSHSSLGYAMEQG-APPVADDAQPL----YGEDIVFRILCPV 230
S+ P G I + GY + G PP + + P ++ R++CP
Sbjct: 240 SLMGPTAGPPIVGMAPLVGPYG--GYKSDTGDWPPRSMYSAPRDEISSSKEFSVRLVCPT 297
Query: 231 EKVDRIIGESDGIVEFLQNEVGVDVRVINPVGGSNEQIVIVTSEEGPDDVLFPAQEALLH 290
+ +IG+ GI+ ++ + G ++V + G ++ ++ ++++E ++ P EA +
Sbjct: 298 GNLGGVIGKGGGIINQIRQDSGATIKVDSSAKG-DDCLITISTKEFFEETFSPTVEAAVL 356
Query: 291 IQTRIVDLVLDKDNFI---TTRLVVPSSYIECLDGKDASL-SEIRRLTGANIQILPREEL 346
+Q R + ++D+ I TTRL+V SS I CL GK S+ +E+RRLT +NI+IL +E L
Sbjct: 357 LQPRCSEKS-ERDSGIISFTTRLLVSSSRIGCLIGKGGSIITEMRRLTKSNIRILSKENL 415
Query: 347 PSCVAKTDELVQIVGEIKAARDAVVEVTSRLRSYLYRDFFQRDIVPPSASLPGF 400
P + DE+VQI G++ A+DA+V+V +RLR+ L F R+ ++PGF
Sbjct: 416 PKIASDDDEMVQISGDLDVAKDALVQVLTRLRANL----FDRE-----GAVPGF 460
Score = 99.4 bits (246), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 62/173 (35%), Positives = 96/173 (55%), Gaps = 14/173 (8%)
Query: 220 EDIVFRILCPVEKVDRIIGESDGIVEFLQNEVGVDVRVINPVGGSNEQIVIVTSE----- 274
ED VFR LCP K+ IIG IV+ L+ E +R+ V G +E++V V S
Sbjct: 45 EDTVFRYLCPGRKIGSIIGRGGEIVKQLRVETKAKIRIGETVPGCDERVVTVYSSSDETN 104
Query: 275 --EGPDDVLFPAQEALLHIQTRIV--DLVLDKDN----FITTRLVVPSSYIECLDGKDAS 326
+ D ++ PA++AL I R+V DL D++ + +L+VPS I C+ GK
Sbjct: 105 TVDDGDKLVSPAEDALFKIHDRVVAEDLHSDQEEEGGPQVNAKLLVPSDQIGCVLGKGGQ 164
Query: 327 LSE-IRRLTGANIQILPREELPSCVAKTDELVQIVGEIKAARDAVVEVTSRLR 378
+ + +R TGA I+IL + +P+C ++DELVQI G+ + A+ ++ SRL
Sbjct: 165 IVQNLRSETGAQIRILKDDHVPACALRSDELVQISGDAAVVKKALHQIASRLH 217
>Medtr6g012630.5 | RNA-binding KH domain protein | HC |
chr6:3864952-3868465 | 20130731
Length = 553
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 122/414 (29%), Positives = 204/414 (49%), Gaps = 53/414 (12%)
Query: 1 MPGDEERIIEISDTRRQ-----DPDRRMPSFSPAQEALLMIHERILXXXXXXXXXXXXXX 55
+PG +ER++ + + + D D+ + SPA++AL IH+R++
Sbjct: 86 VPGCDERVVTVYSSSDETNTVDDGDKLV---SPAEDALFKIHDRVVAEDLHSDQEEEGGP 142
Query: 56 XXXXXXXXXXXXXXXXXXXXXXMHVGCLMGKGGKIIEQMRMETKTQIRILPRDHNLPRCV 115
+GC++GKGG+I++ +R ET QIRIL DH +P C
Sbjct: 143 QVNAKLLVPSD------------QIGCVLGKGGQIVQNLRSETGAQIRILKDDH-VPACA 189
Query: 116 SMSEEIVQVTGDVNAVKNALEVISSRLRESQXXXXXXXXXXXXSPERFFSPDDDYIPRRS 175
S+E+VQ++GD VK AL I+SRL + S P
Sbjct: 190 LRSDELVQISGDAAVVKKALHQIASRLHHNPSRTQHLLGSAVPS----------VYPSGG 239
Query: 176 SMDRPGFGSRIATTNTRNNSHSSLGYAMEQG-APPVADDAQPL----YGEDIVFRILCPV 230
S+ P G I + GY + G PP + + P ++ R++CP
Sbjct: 240 SLMGPTAGPPIVGMAPLVGPYG--GYKSDTGDWPPRSMYSAPRDEISSSKEFSVRLVCPT 297
Query: 231 EKVDRIIGESDGIVEFLQNEVGVDVRVINPVGGSNEQIVIVTSEEGPDDVLFPAQEALLH 290
+ +IG+ GI+ ++ + G ++V + G ++ ++ ++++E ++ P EA +
Sbjct: 298 GNLGGVIGKGGGIINQIRQDSGATIKVDSSAKG-DDCLITISTKEFFEETFSPTVEAAVL 356
Query: 291 IQTRIVDLVLDKDNFI---TTRLVVPSSYIECLDGKDASL-SEIRRLTGANIQILPREEL 346
+Q R + ++D+ I TTRL+V SS I CL GK S+ +E+RRLT +NI+IL +E L
Sbjct: 357 LQPRCSEKS-ERDSGIISFTTRLLVSSSRIGCLIGKGGSIITEMRRLTKSNIRILSKENL 415
Query: 347 PSCVAKTDELVQIVGEIKAARDAVVEVTSRLRSYLYRDFFQRDIVPPSASLPGF 400
P + DE+VQI G++ A+DA+V+V +RLR+ L F R+ ++PGF
Sbjct: 416 PKIASDDDEMVQISGDLDVAKDALVQVLTRLRANL----FDRE-----GAVPGF 460
Score = 99.4 bits (246), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 62/173 (35%), Positives = 96/173 (55%), Gaps = 14/173 (8%)
Query: 220 EDIVFRILCPVEKVDRIIGESDGIVEFLQNEVGVDVRVINPVGGSNEQIVIVTSE----- 274
ED VFR LCP K+ IIG IV+ L+ E +R+ V G +E++V V S
Sbjct: 45 EDTVFRYLCPGRKIGSIIGRGGEIVKQLRVETKAKIRIGETVPGCDERVVTVYSSSDETN 104
Query: 275 --EGPDDVLFPAQEALLHIQTRIV--DLVLDKDN----FITTRLVVPSSYIECLDGKDAS 326
+ D ++ PA++AL I R+V DL D++ + +L+VPS I C+ GK
Sbjct: 105 TVDDGDKLVSPAEDALFKIHDRVVAEDLHSDQEEEGGPQVNAKLLVPSDQIGCVLGKGGQ 164
Query: 327 LSE-IRRLTGANIQILPREELPSCVAKTDELVQIVGEIKAARDAVVEVTSRLR 378
+ + +R TGA I+IL + +P+C ++DELVQI G+ + A+ ++ SRL
Sbjct: 165 IVQNLRSETGAQIRILKDDHVPACALRSDELVQISGDAAVVKKALHQIASRLH 217
>Medtr6g012630.2 | RNA-binding KH domain protein | HC |
chr6:3864952-3868465 | 20130731
Length = 553
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 122/414 (29%), Positives = 204/414 (49%), Gaps = 53/414 (12%)
Query: 1 MPGDEERIIEISDTRRQ-----DPDRRMPSFSPAQEALLMIHERILXXXXXXXXXXXXXX 55
+PG +ER++ + + + D D+ + SPA++AL IH+R++
Sbjct: 86 VPGCDERVVTVYSSSDETNTVDDGDKLV---SPAEDALFKIHDRVVAEDLHSDQEEEGGP 142
Query: 56 XXXXXXXXXXXXXXXXXXXXXXMHVGCLMGKGGKIIEQMRMETKTQIRILPRDHNLPRCV 115
+GC++GKGG+I++ +R ET QIRIL DH +P C
Sbjct: 143 QVNAKLLVPSD------------QIGCVLGKGGQIVQNLRSETGAQIRILKDDH-VPACA 189
Query: 116 SMSEEIVQVTGDVNAVKNALEVISSRLRESQXXXXXXXXXXXXSPERFFSPDDDYIPRRS 175
S+E+VQ++GD VK AL I+SRL + S P
Sbjct: 190 LRSDELVQISGDAAVVKKALHQIASRLHHNPSRTQHLLGSAVPS----------VYPSGG 239
Query: 176 SMDRPGFGSRIATTNTRNNSHSSLGYAMEQG-APPVADDAQPL----YGEDIVFRILCPV 230
S+ P G I + GY + G PP + + P ++ R++CP
Sbjct: 240 SLMGPTAGPPIVGMAPLVGPYG--GYKSDTGDWPPRSMYSAPRDEISSSKEFSVRLVCPT 297
Query: 231 EKVDRIIGESDGIVEFLQNEVGVDVRVINPVGGSNEQIVIVTSEEGPDDVLFPAQEALLH 290
+ +IG+ GI+ ++ + G ++V + G ++ ++ ++++E ++ P EA +
Sbjct: 298 GNLGGVIGKGGGIINQIRQDSGATIKVDSSAKG-DDCLITISTKEFFEETFSPTVEAAVL 356
Query: 291 IQTRIVDLVLDKDNFI---TTRLVVPSSYIECLDGKDASL-SEIRRLTGANIQILPREEL 346
+Q R + ++D+ I TTRL+V SS I CL GK S+ +E+RRLT +NI+IL +E L
Sbjct: 357 LQPRCSEKS-ERDSGIISFTTRLLVSSSRIGCLIGKGGSIITEMRRLTKSNIRILSKENL 415
Query: 347 PSCVAKTDELVQIVGEIKAARDAVVEVTSRLRSYLYRDFFQRDIVPPSASLPGF 400
P + DE+VQI G++ A+DA+V+V +RLR+ L F R+ ++PGF
Sbjct: 416 PKIASDDDEMVQISGDLDVAKDALVQVLTRLRANL----FDRE-----GAVPGF 460
Score = 99.4 bits (246), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 62/173 (35%), Positives = 96/173 (55%), Gaps = 14/173 (8%)
Query: 220 EDIVFRILCPVEKVDRIIGESDGIVEFLQNEVGVDVRVINPVGGSNEQIVIVTSE----- 274
ED VFR LCP K+ IIG IV+ L+ E +R+ V G +E++V V S
Sbjct: 45 EDTVFRYLCPGRKIGSIIGRGGEIVKQLRVETKAKIRIGETVPGCDERVVTVYSSSDETN 104
Query: 275 --EGPDDVLFPAQEALLHIQTRIV--DLVLDKDN----FITTRLVVPSSYIECLDGKDAS 326
+ D ++ PA++AL I R+V DL D++ + +L+VPS I C+ GK
Sbjct: 105 TVDDGDKLVSPAEDALFKIHDRVVAEDLHSDQEEEGGPQVNAKLLVPSDQIGCVLGKGGQ 164
Query: 327 LSE-IRRLTGANIQILPREELPSCVAKTDELVQIVGEIKAARDAVVEVTSRLR 378
+ + +R TGA I+IL + +P+C ++DELVQI G+ + A+ ++ SRL
Sbjct: 165 IVQNLRSETGAQIRILKDDHVPACALRSDELVQISGDAAVVKKALHQIASRLH 217
>Medtr5g031720.1 | RNA-binding KH domain protein | HC |
chr5:13608841-13602499 | 20130731
Length = 596
Score = 135 bits (341), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 135/492 (27%), Positives = 230/492 (46%), Gaps = 75/492 (15%)
Query: 80 VGCLMGKGGKIIEQMRMETKTQIRILPRDHNLPRCVSMSEEIVQVTGDVNAVKNALEVIS 139
VG ++GKGGK I +R + + IR+ P P C + EE++ +TG+ AVK AL +S
Sbjct: 145 VGAIVGKGGKNISNIRNNSGSNIRVCP----APHCAAKDEELILITGESLAVKKALIYVS 200
Query: 140 SRLRE----------SQXXXXXXXXXXXXSPERFFSPDDDYIPRRSSMDRPGFGSRIATT 189
L++ + + E F + ++P SM+ G A+
Sbjct: 201 YCLQDCPPMGKVSLNTPPTINSSDRSTSYTHEDLFPHLNSWLP---SME--GLSINDASK 255
Query: 190 NTRN-NSHSSLGYAMEQGAPPVADDAQPLYGEDIVFRILCPVEKVDRIIGESDGIVEFLQ 248
T N N +SSL +G+ G +VFR+LC +IG+ IV +
Sbjct: 256 QTTNANGNSSLD---SKGS-----------GHAVVFRLLCSNNVAGSVIGKKGSIVRTFE 301
Query: 249 NEVGVDVRVINPVGGSNEQIVIVTSEEGPDDVLFPAQEALLHIQTRIVDLVLDKDNF--- 305
G + P+G E+IV +++ E + PAQ+A++ + TRI + + ++ F
Sbjct: 302 IRTGASIVFAPPLGQYEERIVTISAFENLESSNSPAQDAVILVFTRIAEDHI-RNGFQPA 360
Query: 306 ------ITTRLVVPSSYIECLDGKDAS-LSEIRRLTGANIQILPREELPSCVAKTDELVQ 358
+T RL++ +S + L G + +SE+R+++GA+IQ+L E +P+ + D +VQ
Sbjct: 361 TAVESPVTARLLITTSTLHLLTGNEGQVISELRQVSGADIQLLHGEPIPN-ASDNDVVVQ 419
Query: 359 IVGEIKAARDAVVEVTSRLRSY-LYRDFFQRDIVPPSASL------PGF---EASSSNNI 408
I G + +A+ ++TS +R L + + PS L F + SS
Sbjct: 420 ITGGYRCVENALRKITSIIRDNPLTNELLAEAKIKPSFPLNKDTVRSKFITRKKSSFPFA 479
Query: 409 SLVAETSSIYQNVQSMAAALPSKESGGSSFEAGKQKESDRGDDVLGSLNRLAVPLVTRST 468
+ + + +YQ A E+G S + E RG+ V VT +T
Sbjct: 480 RVPPQNAGVYQ-------AKKVTENGESHTNLIENVEPGRGN---------IVATVTNTT 523
Query: 469 LEVVIPEYAVPKLTAKSRSKLAQISELSGANVTLVEDRPDVTQ--KIIQISGTPEQAERA 526
+E+++ E+ + + L +I ++SGA+VT+ + T K++ ISGTP+Q A
Sbjct: 524 VEIIVSEHVFGSVYGEDGGNLDRIRQISGADVTVFDPSSTGTSGGKVV-ISGTPDQTFAA 582
Query: 527 QSLLQGFILSTQ 538
QSLLQ FI + Q
Sbjct: 583 QSLLQAFIQTAQ 594
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 116/250 (46%), Gaps = 36/250 (14%)
Query: 222 IVFRILCPVEKVDRIIGESDGIVEFLQNEVGVDVRVINPVGGSNEQIVIVTSEEGPDDVL 281
I FR++C V +IG S IV L+ E G + + V G+++++++V +
Sbjct: 39 IAFRLVCHSSTVGGLIGSSGSIVSQLRRETGCKIHCEDAVVGTDDRVILVIGSMSDRKGI 98
Query: 282 F---------PAQEALLHIQTRIVDLVLDK--DNFITTRLVVPSSYIECLDGKDA-SLSE 329
AQE ++ + R+ L +K + + +L+ SS + + GK ++S
Sbjct: 99 VLGDREMEVSNAQEGVVRVFDRVWGLESEKGGNGEVYGKLLAHSSQVGAIVGKGGKNISN 158
Query: 330 IRRLTGANIQILPREELPSCVAKTDELVQIVGEIKAARDAVVEVTSRLRSYLYRDFFQRD 389
IR +G+NI++ P P C AK +EL+ I GE A + A++ V SY +D
Sbjct: 159 IRNNSGSNIRVCP---APHCAAKDEELILITGESLAVKKALIYV-----SYCLQD----- 205
Query: 390 IVPP----SASLPGFEASSSNNISLVAETSSIYQNVQSMAAALPSKESGGSSFEAGKQKE 445
PP S + P SS + S E ++ ++ S LPS E G S +A KQ
Sbjct: 206 -CPPMGKVSLNTPPTINSSDRSTSYTHE--DLFPHLNSW---LPSME-GLSINDASKQTT 258
Query: 446 SDRGDDVLGS 455
+ G+ L S
Sbjct: 259 NANGNSSLDS 268
>Medtr2g019090.2 | RNA-binding KH domain protein | HC |
chr2:6163891-6155394 | 20130731
Length = 628
Score = 134 bits (336), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 124/449 (27%), Positives = 209/449 (46%), Gaps = 51/449 (11%)
Query: 83 LMGKGGKIIEQMRMETKTQIRILPRDHNLPR--CVSMSEEIVQVTGDVNAVKNALEVISS 140
L+GK G I+Q+R++T+T I+++P+D P C + V +TG+ AVK AL +S+
Sbjct: 159 LIGKAGATIKQLRVKTRTNIKVVPKDAADPEHSCAMEFDNFVLITGESEAVKRALFAVST 218
Query: 141 RLRE-SQXXXXXXXXXXXXSPERFFSPDD-------DYIPRRSSMDRPGFGSRIATTNTR 192
+ + S +P P + P + +P ++ T
Sbjct: 219 IMYKFSPKEDIPLDTTVPETPHSIIIPSELPIYPPGGLYPASDPIVQPRSFPQLIGATTM 278
Query: 193 NNSHSSLGYAMEQGAPPVADDAQPLYG-------EDIVFRILCPVEKVDRIIGESDGIVE 245
+ H GYA P+ P+ E+++ R+LCP +K+ ++IG+ G ++
Sbjct: 279 QDLHG--GYADTGNTWPLYSSPLPVVSSLGASQSEELIVRMLCPSDKIGQLIGKGGGTIK 336
Query: 246 FLQNEVGVDVRVINPVGGSNEQIVIVTSEEGPDDVLFPAQEALLHIQTRIVDLVLDKDNF 305
++ G + V + +E ++ +T+ E D+ A EA+L +Q +I D + D
Sbjct: 337 RMRQASGARIEVDDSKARHDECLITITATESTSDLKSVAVEAVLLLQEKIND---EDDAP 393
Query: 306 ITTRLVVPSSYIECLDGKDAS-LSEIRRLTGANIQILPREELPSCVAKTDELVQIVGEIK 364
++ RL+VPS I C+ G+ + ++EIR+ T A+IQI R P DELV++VGE+
Sbjct: 394 VSIRLLVPSKVIGCIIGRSGAIINEIRKRTKADIQI-SRSNKPKYADDNDELVEVVGEVD 452
Query: 365 AARDAVVEVTSRLRSYLYRDF---FQRDIVPPSASLPGFEASSSNNISLVAETSSIYQNV 421
RDA++++ RLR + ++ R I S ASSS V + ++
Sbjct: 453 CVRDALIQIVLRLREDVLKNKDIDHNRHIGSES-----LYASSS-----VLSAPPMLSSI 502
Query: 422 QSMAAALPSKESGGSSFEAGKQ-KESDRG-------DDVLGSLNRLAVPLVTR------S 467
+ A AL + GS G S G D+ GS++ A L S
Sbjct: 503 PATAPALAYDQRTGSGTGLGMHSSRSHYGYDSYSMEDNGYGSMSSYATNLYEGHRLPPLS 562
Query: 468 TLEVVIPEYAVPKLTAKSRSKLAQISELS 496
TLE+V+P AV K+ K + LA I ++S
Sbjct: 563 TLEMVVPANAVGKVMGKGGANLANIRKVS 591
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 101/206 (49%), Gaps = 34/206 (16%)
Query: 219 GEDIVFRILCPVEKVDRIIGESDGIVEFLQNEVGVDVRVINPVGGSNEQIVIV------- 271
GE I +RILCP E + +IG++ ++ ++ E V+V++P G+ +++ +
Sbjct: 39 GELIAYRILCPNEVIGSVIGKNGKVINSIRQESRAKVKVVDPFPGAKHRVITIFCHVKNK 98
Query: 272 --------TSEEGPDDVLFPAQEALLHIQTRIVDLV-------LDKDNFITTRLVVPSSY 316
E P L AQ+AL+ + + I + + + N +++VPSS
Sbjct: 99 EEIEIEDEFDNEKP---LCAAQDALIKVHSAISNSIETAGDSEKKRKNKDECQILVPSSQ 155
Query: 317 IECLDGK-DASLSEIRRLTGANIQILPREEL---PSCVAKTDELVQIVGEIKAARDAVVE 372
L GK A++ ++R T NI+++P++ SC + D V I GE +A + A+
Sbjct: 156 SAILIGKAGATIKQLRVKTRTNIKVVPKDAADPEHSCAMEFDNFVLITGESEAVKRALFA 215
Query: 373 VTSRLRSYLYRDFFQRDIVPPSASLP 398
V+ + +Y+ F ++ +P ++P
Sbjct: 216 VS----TIMYK-FSPKEDIPLDTTVP 236
>Medtr2g009650.1 | RNA-binding KH domain protein | HC |
chr2:2001720-2009761 | 20130731
Length = 766
Score = 129 bits (323), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 90/342 (26%), Positives = 169/342 (49%), Gaps = 41/342 (11%)
Query: 79 HVGCLMGKGGKIIEQMRMETKTQIRILPRDHNLPRCVSMSEEIVQVTGDVNAVKNALEVI 138
G ++GKGGK++E+++ +T +I + NLP C+S +E++++ G V++VK AL +
Sbjct: 162 QAGSVIGKGGKVVEKIKKDTGCKIWVC--KDNLPACISSPDEVIEIEGSVSSVKKALVAV 219
Query: 139 SSRLRESQXXXXXXXXXXXXSPERFFSPDDDYIPRRSSMDRPG---FG------------ 183
S L++ + S E +PR + M P G
Sbjct: 220 SRNLQD-RHHADRTKMTGQNSHEVIHHEALVGVPRETLMSVPRETFIGAPRETLTAVPCE 278
Query: 184 --------------SRIATTNTRNNSHSSLGYAMEQGAPPVADDAQPLYGEDIVFRILCP 229
S ++ + +NS+++ +++ V+ + ++I F+I+C
Sbjct: 279 TLTDLHVDHLLQRRSALSILPSSSNSYATGVHSLSAEVNRVSSLEPKAHQQEITFKIICS 338
Query: 230 VEKVDRIIGESDGIVEFLQNEVGVDVRVINPVGGSNEQIVIVTSEEGPDDVLFPAQEALL 289
+++ +IG+ I+ LQ+E G V V V ++++ +T+ E P+ PAQ+A +
Sbjct: 339 NDRIGGVIGKGGNIIRALQSETGATVSVGPSVAECEDRLITITASESPESRYSPAQKATV 398
Query: 290 HIQTRIV--------DLVLDKDNFITTRLVVPSSYIECLDGKDASL-SEIRRLTGANIQI 340
+ +R V D L+ + +T +LVV S+ + CL GK + SE+R+ TGA+I+I
Sbjct: 399 LVFSRSVEAGIEKGIDSGLNTGSSVTAQLVVSSNQVGCLLGKGGVIVSEMRKATGASIRI 458
Query: 341 LPREELPSCVAKTDELVQIVGEIKAARDAVVEVTSRLRSYLY 382
+ +++ C + D++VQI GE +DA+ T RLR L+
Sbjct: 459 VGTDKVSKCASDNDQVVQISGEFSNVQDALYNATGRLRDNLF 500
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 97/190 (51%), Gaps = 22/190 (11%)
Query: 216 PLYGEDIVFRILCPVEKVDRIIGESDGIVEFLQNEVGVDV-----------RVINPVGGS 264
P+ + FR+LC ++ +IG+S +++ LQ G + RVI +G S
Sbjct: 42 PIPAGHVAFRLLCNSSRIGGVIGKSGTVIKNLQLTTGAKIRIEDSPNESPDRVIMVIGAS 101
Query: 265 N-EQIVIVTSEEGPDDVL--FPAQEALLHIQTRIVDLVLD------KDNFITTRLVVPSS 315
N + V+V S G + + AQEALL + RI+++ + D ++ RLV S+
Sbjct: 102 NIDGKVMVRSHSGDGEAIEVSKAQEALLRVFDRILEVAAEMEGIELGDRTVSCRLVADSA 161
Query: 316 YIECLDGKDASLSE-IRRLTGANIQILPREELPSCVAKTDELVQIVGEIKAARDAVVEVT 374
+ GK + E I++ TG I + ++ LP+C++ DE+++I G + + + A+V V+
Sbjct: 162 QAGSVIGKGGKVVEKIKKDTGCKIWVC-KDNLPACISSPDEVIEIEGSVSSVKKALVAVS 220
Query: 375 SRLRSYLYRD 384
L+ + D
Sbjct: 221 RNLQDRHHAD 230
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 64/102 (62%), Gaps = 2/102 (1%)
Query: 435 GSSFEAGKQKESDRGDDVLGSLNRLAVPLVTRSTLEVVIPEYAVPKLTAKSRSKLAQISE 494
GS EA S +G L S ++ A+ VT +T+E+V+PE + + ++ S LA++ +
Sbjct: 664 GSINEASWGSTSRKGGLELVSGSKSAI--VTNTTIEIVVPEDTLYLVYGENGSNLARLRQ 721
Query: 495 LSGANVTLVEDRPDVTQKIIQISGTPEQAERAQSLLQGFILS 536
+SGA V + E RP + + I +SG+P++ + AQSLLQ FIL+
Sbjct: 722 ISGAKVVIHEPRPGTSDRTIVLSGSPDETQAAQSLLQAFILN 763
>Medtr7g011080.2 | RNA-binding KH domain protein | HC |
chr7:2893165-2900092 | 20130731
Length = 571
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 112/407 (27%), Positives = 194/407 (47%), Gaps = 60/407 (14%)
Query: 1 MPGDEERIIEISDTRRQDPDRRMPS--FSPAQEALLMIHERILXXXXXXXXXXXXXXXXX 58
+PG +ER++ + + D PA +AL+ IH++++
Sbjct: 88 VPGCDERVVTVYSVSDESNDFEDSGEFMCPAMDALVRIHQKVIAEDLRGVEDEDVDMEKV 147
Query: 59 XXXXXXXXXXXXXXXXXXXMHVGCLMGKGGKIIEQMRMETKTQIRILPRDHNLPRCVSMS 118
+GC++GKGG+I++ +R ET QIRIL +D LP C S
Sbjct: 148 DGGDLVTAKLLVASD-----QIGCVIGKGGQIVQNIRSETGAQIRIL-KDDRLPLCALNS 201
Query: 119 EEIVQVTGDVNAVKNALEVISSRLRESQXXXXXXXXXXXXSPERFFSPDDDYIPRRSSMD 178
+E+VQ++G++ VK AL +++RL ++ P R +P
Sbjct: 202 DELVQISGEIAVVKKALIQVAARLHDN--------------PSRTQHLLTSAVP------ 241
Query: 179 RPGFGSRIATTNTRNNSHSSLGYAMEQGAPP-----------VADDAQPLYG-------- 219
A + + SH G A G P V D + +Y
Sbjct: 242 -----GVYAASGSMVGSH---GGAPIMGMAPIGGGYGGYKGDVVDYPRSMYPGSRDEGSV 293
Query: 220 EDIVFRILCPVEKVDRIIGESDGIVEFLQNEVGVDVRVINPVGGSNEQIVIVTSEEGPDD 279
++ R +CP + +IG+ GI+ ++ + G +++V + ++ ++ +++ E +D
Sbjct: 294 KEFSVRFVCPTANIGGVIGKGGGIINQIRQDSGANIKVDSSATEGDDCLIAISARELFED 353
Query: 280 VLFPAQEALLHIQTRIVDLVLDKDNFI---TTRLVVPSSYIECLDGKDASL-SEIRRLTG 335
EA + +Q R + V ++D+ I T+RL+V SS I CL GK S+ +E+RRLT
Sbjct: 354 PFSATIEAAVLLQPRCSEKV-ERDSGILSFTSRLLVSSSRIGCLIGKGGSIITEMRRLTK 412
Query: 336 ANIQILPREELPSCVAKTDELVQIVGEIKAARDAVVEVTSRLRSYLY 382
ANI+IL +E+LP + DE+VQI GE+ A+DA+++V +RLR+ L+
Sbjct: 413 ANIRILSKEDLPKIATEDDEMVQISGELDIAKDALLQVLTRLRANLF 459
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 73/224 (32%), Positives = 116/224 (51%), Gaps = 28/224 (12%)
Query: 183 GSRIATTNTRNNSHSSL--GYAMEQGAPPVADDAQP-----LYGEDIVFRILCPVEKVDR 235
G R + N R++SH+S+ + P D+ P + +D V+R LCPV K+
Sbjct: 3 GQRTSYGNKRSHSHNSVDDNRTNNKRRNPNTDETTPRDTFHITQDDTVYRYLCPVRKIGS 62
Query: 236 IIGESDGIVEFLQNEVGVDVRVINPVGGSNEQIVIV--TSEEGPD-----DVLFPAQEAL 288
IIG IV+ L+ + +R+ V G +E++V V S+E D + + PA +AL
Sbjct: 63 IIGRGGEIVKQLRLDTKAKIRIGETVPGCDERVVTVYSVSDESNDFEDSGEFMCPAMDAL 122
Query: 289 LHIQTRIV--DL-----------VLDKDNFITTRLVVPSSYIECLDGKDASLSE-IRRLT 334
+ I +++ DL +D + +T +L+V S I C+ GK + + IR T
Sbjct: 123 VRIHQKVIAEDLRGVEDEDVDMEKVDGGDLVTAKLLVASDQIGCVIGKGGQIVQNIRSET 182
Query: 335 GANIQILPREELPSCVAKTDELVQIVGEIKAARDAVVEVTSRLR 378
GA I+IL + LP C +DELVQI GEI + A+++V +RL
Sbjct: 183 GAQIRILKDDRLPLCALNSDELVQISGEIAVVKKALIQVAARLH 226
>Medtr7g011080.1 | RNA-binding KH domain protein | HC |
chr7:2893165-2900092 | 20130731
Length = 571
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 112/407 (27%), Positives = 194/407 (47%), Gaps = 60/407 (14%)
Query: 1 MPGDEERIIEISDTRRQDPDRRMPS--FSPAQEALLMIHERILXXXXXXXXXXXXXXXXX 58
+PG +ER++ + + D PA +AL+ IH++++
Sbjct: 88 VPGCDERVVTVYSVSDESNDFEDSGEFMCPAMDALVRIHQKVIAEDLRGVEDEDVDMEKV 147
Query: 59 XXXXXXXXXXXXXXXXXXXMHVGCLMGKGGKIIEQMRMETKTQIRILPRDHNLPRCVSMS 118
+GC++GKGG+I++ +R ET QIRIL +D LP C S
Sbjct: 148 DGGDLVTAKLLVASD-----QIGCVIGKGGQIVQNIRSETGAQIRIL-KDDRLPLCALNS 201
Query: 119 EEIVQVTGDVNAVKNALEVISSRLRESQXXXXXXXXXXXXSPERFFSPDDDYIPRRSSMD 178
+E+VQ++G++ VK AL +++RL ++ P R +P
Sbjct: 202 DELVQISGEIAVVKKALIQVAARLHDN--------------PSRTQHLLTSAVP------ 241
Query: 179 RPGFGSRIATTNTRNNSHSSLGYAMEQGAPP-----------VADDAQPLYG-------- 219
A + + SH G A G P V D + +Y
Sbjct: 242 -----GVYAASGSMVGSH---GGAPIMGMAPIGGGYGGYKGDVVDYPRSMYPGSRDEGSV 293
Query: 220 EDIVFRILCPVEKVDRIIGESDGIVEFLQNEVGVDVRVINPVGGSNEQIVIVTSEEGPDD 279
++ R +CP + +IG+ GI+ ++ + G +++V + ++ ++ +++ E +D
Sbjct: 294 KEFSVRFVCPTANIGGVIGKGGGIINQIRQDSGANIKVDSSATEGDDCLIAISARELFED 353
Query: 280 VLFPAQEALLHIQTRIVDLVLDKDNFI---TTRLVVPSSYIECLDGKDASL-SEIRRLTG 335
EA + +Q R + V ++D+ I T+RL+V SS I CL GK S+ +E+RRLT
Sbjct: 354 PFSATIEAAVLLQPRCSEKV-ERDSGILSFTSRLLVSSSRIGCLIGKGGSIITEMRRLTK 412
Query: 336 ANIQILPREELPSCVAKTDELVQIVGEIKAARDAVVEVTSRLRSYLY 382
ANI+IL +E+LP + DE+VQI GE+ A+DA+++V +RLR+ L+
Sbjct: 413 ANIRILSKEDLPKIATEDDEMVQISGELDIAKDALLQVLTRLRANLF 459
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 73/224 (32%), Positives = 116/224 (51%), Gaps = 28/224 (12%)
Query: 183 GSRIATTNTRNNSHSSL--GYAMEQGAPPVADDAQP-----LYGEDIVFRILCPVEKVDR 235
G R + N R++SH+S+ + P D+ P + +D V+R LCPV K+
Sbjct: 3 GQRTSYGNKRSHSHNSVDDNRTNNKRRNPNTDETTPRDTFHITQDDTVYRYLCPVRKIGS 62
Query: 236 IIGESDGIVEFLQNEVGVDVRVINPVGGSNEQIVIV--TSEEGPD-----DVLFPAQEAL 288
IIG IV+ L+ + +R+ V G +E++V V S+E D + + PA +AL
Sbjct: 63 IIGRGGEIVKQLRLDTKAKIRIGETVPGCDERVVTVYSVSDESNDFEDSGEFMCPAMDAL 122
Query: 289 LHIQTRIV--DL-----------VLDKDNFITTRLVVPSSYIECLDGKDASLSE-IRRLT 334
+ I +++ DL +D + +T +L+V S I C+ GK + + IR T
Sbjct: 123 VRIHQKVIAEDLRGVEDEDVDMEKVDGGDLVTAKLLVASDQIGCVIGKGGQIVQNIRSET 182
Query: 335 GANIQILPREELPSCVAKTDELVQIVGEIKAARDAVVEVTSRLR 378
GA I+IL + LP C +DELVQI GEI + A+++V +RL
Sbjct: 183 GAQIRILKDDRLPLCALNSDELVQISGEIAVVKKALIQVAARLH 226
>Medtr6g012630.3 | RNA-binding KH domain protein | HC |
chr6:3864952-3867231 | 20130731
Length = 451
Score = 116 bits (290), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 106/371 (28%), Positives = 177/371 (47%), Gaps = 42/371 (11%)
Query: 1 MPGDEERIIEI----SDTRRQDPDRRMPSFSPAQEALLMIHERILXXXXXXXXXXXXXXX 56
+PG +ER++ + +T D ++ SPA++AL IH+R++
Sbjct: 86 VPGCDERVVTVYSSSDETNTVDDGDKL--VSPAEDALFKIHDRVVAEDLHSDQEEEGGPQ 143
Query: 57 XXXXXXXXXXXXXXXXXXXXXMHVGCLMGKGGKIIEQMRMETKTQIRILPRDHNLPRCVS 116
+GC++GKGG+I++ +R ET QIRIL DH +P C
Sbjct: 144 VNAKLLVPSD------------QIGCVLGKGGQIVQNLRSETGAQIRILKDDH-VPACAL 190
Query: 117 MSEEIVQVTGDVNAVKNALEVISSRLRESQXXXXXXXXXXXXSPERFFSPDDDYIPRRSS 176
S+E+VQ++GD VK AL I+SRL + S P S
Sbjct: 191 RSDELVQISGDAAVVKKALHQIASRLHHNPSRTQHLLGSAVPS----------VYPSGGS 240
Query: 177 MDRPGFGSRIATTNTRNNSHSSLGYAMEQG-APPVADDAQPL----YGEDIVFRILCPVE 231
+ P G I + GY + G PP + + P ++ R++CP
Sbjct: 241 LMGPTAGPPIVGMAPLVGPYG--GYKSDTGDWPPRSMYSAPRDEISSSKEFSVRLVCPTG 298
Query: 232 KVDRIIGESDGIVEFLQNEVGVDVRVINPVGGSNEQIVIVTSEEGPDDVLFPAQEALLHI 291
+ +IG+ GI+ ++ + G ++V + G ++ ++ ++++E ++ P EA + +
Sbjct: 299 NLGGVIGKGGGIINQIRQDSGATIKVDSSAKG-DDCLITISTKEFFEETFSPTVEAAVLL 357
Query: 292 QTRIVDLVLDKDNFI---TTRLVVPSSYIECLDGKDASL-SEIRRLTGANIQILPREELP 347
Q R + ++D+ I TTRL+V SS I CL GK S+ +E+RRLT +NI+IL +E LP
Sbjct: 358 QPRCSEKS-ERDSGIISFTTRLLVSSSRIGCLIGKGGSIITEMRRLTKSNIRILSKENLP 416
Query: 348 SCVAKTDELVQ 358
+ DE+VQ
Sbjct: 417 KIASDDDEMVQ 427
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/173 (35%), Positives = 96/173 (55%), Gaps = 14/173 (8%)
Query: 220 EDIVFRILCPVEKVDRIIGESDGIVEFLQNEVGVDVRVINPVGGSNEQIVIVTSE----- 274
ED VFR LCP K+ IIG IV+ L+ E +R+ V G +E++V V S
Sbjct: 45 EDTVFRYLCPGRKIGSIIGRGGEIVKQLRVETKAKIRIGETVPGCDERVVTVYSSSDETN 104
Query: 275 --EGPDDVLFPAQEALLHIQTRIV--DLVLDKDN----FITTRLVVPSSYIECLDGKDAS 326
+ D ++ PA++AL I R+V DL D++ + +L+VPS I C+ GK
Sbjct: 105 TVDDGDKLVSPAEDALFKIHDRVVAEDLHSDQEEEGGPQVNAKLLVPSDQIGCVLGKGGQ 164
Query: 327 LSE-IRRLTGANIQILPREELPSCVAKTDELVQIVGEIKAARDAVVEVTSRLR 378
+ + +R TGA I+IL + +P+C ++DELVQI G+ + A+ ++ SRL
Sbjct: 165 IVQNLRSETGAQIRILKDDHVPACALRSDELVQISGDAAVVKKALHQIASRLH 217
>Medtr7g115340.1 | poly(rC)-binding-like protein | HC |
chr7:47649189-47656173 | 20130731
Length = 510
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 90/363 (24%), Positives = 159/363 (43%), Gaps = 51/363 (14%)
Query: 212 DDAQPLYGEDIVFRILCPVEKVDRIIGESDGIVEFLQNEVGVDVRVINPVGGSNEQIVIV 271
+ P + + VFR+L P +KV IIG ++ + E V++++ G++E+ V+V
Sbjct: 105 EKKWPGWPGESVFRMLVPAQKVGGIIGRKGEFIKKIVEETRARVKILDGPPGTSERAVMV 164
Query: 272 TSEEGPDDVLFPAQEALLHIQTRIVDLVLDKDNF---ITTRLVVPSSYIECLDGKD-ASL 327
++++ P L PA + LL R++D + ++T+ +VP+S L GK ++
Sbjct: 165 SAKDEPGSSLPPAVDGLLKAHKRLIDGLDAPSGLAGKVSTKFLVPASQAGSLIGKQGGTV 224
Query: 328 SEIRRLTGANIQILPREELPSCVAKTDELVQIVGEIKAARDAVVEVTSRLRSYLYRDFFQ 387
I+ + +++L E+LP + D +V++VG+ AV + S L+ +L
Sbjct: 225 KSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDPIGVHKAVEMIASHLKKFL----VD 280
Query: 388 RDIVPPSASLPGFEAS--SSNN--ISLVAETSSIYQNVQSMAAALPSKESGGSSFEAGKQ 443
R I+ P FE S +NN + + +Q+ LP GG F Q
Sbjct: 281 RSII------PIFEMSMQMANNHPVEHMPVPPPPHQS-WGPPQGLPPNAGGGPGFGLAPQ 333
Query: 444 ----------------------KESDRGDDVLG---------SLNRLAVP-LVTRSTLEV 471
K+ G G S N + P +VT+ T ++
Sbjct: 334 FMPPRRQVDNYYPPAEMPPPLDKQPHHGISAYGRDASIGVHASSNTQSAPSMVTQITQQM 393
Query: 472 VIPEYAVPKLTAKSRSKLAQISELSGANVTLVEDRPDVTQKIIQISGTPEQAERAQSLLQ 531
IP + + + ++ I SGA VT+ E R + ++ISGT Q + AQ L+Q
Sbjct: 394 QIPLSYADAVIGTAGTNISYIRRASGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQ 453
Query: 532 GFI 534
F+
Sbjct: 454 NFM 456
>Medtr7g115340.2 | poly(rC)-binding-like protein | HC |
chr7:47649475-47656173 | 20130731
Length = 442
Score = 92.8 bits (229), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 90/359 (25%), Positives = 158/359 (44%), Gaps = 51/359 (14%)
Query: 216 PLYGEDIVFRILCPVEKVDRIIGESDGIVEFLQNEVGVDVRVINPVGGSNEQIVIVTSEE 275
P + + VFR+L P +KV IIG ++ + E V++++ G++E+ V+V++++
Sbjct: 41 PGWPGESVFRMLVPAQKVGGIIGRKGEFIKKIVEETRARVKILDGPPGTSERAVMVSAKD 100
Query: 276 GPDDVLFPAQEALLHIQTRIVDLVLDKDNF---ITTRLVVPSSYIECLDGKD-ASLSEIR 331
P L PA + LL R++D + ++T+ +VP+S L GK ++ I+
Sbjct: 101 EPGSSLPPAVDGLLKAHKRLIDGLDAPSGLAGKVSTKFLVPASQAGSLIGKQGGTVKSIQ 160
Query: 332 RLTGANIQILPREELPSCVAKTDELVQIVGEIKAARDAVVEVTSRLRSYLYRDFFQRDIV 391
+ +++L E+LP + D +V++VG+ AV + S L+ +L R I+
Sbjct: 161 EASNCIVRVLGAEDLPVFALQDDRVVEVVGDPIGVHKAVEMIASHLKKFL----VDRSII 216
Query: 392 PPSASLPGFEAS--SSNN--ISLVAETSSIYQNVQSMAAALPSKESGGSSFEAGKQ---- 443
P FE S +NN + + +Q+ LP GG F Q
Sbjct: 217 PI------FEMSMQMANNHPVEHMPVPPPPHQS-WGPPQGLPPNAGGGPGFGLAPQFMPP 269
Query: 444 ------------------KESDRGDDVLG---------SLNRLAVP-LVTRSTLEVVIPE 475
K+ G G S N + P +VT+ T ++ IP
Sbjct: 270 RRQVDNYYPPAEMPPPLDKQPHHGISAYGRDASIGVHASSNTQSAPSMVTQITQQMQIPL 329
Query: 476 YAVPKLTAKSRSKLAQISELSGANVTLVEDRPDVTQKIIQISGTPEQAERAQSLLQGFI 534
+ + + ++ I SGA VT+ E R + ++ISGT Q + AQ L+Q F+
Sbjct: 330 SYADAVIGTAGTNISYIRRASGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFM 388
>Medtr4g127380.1 | poly(rC)-binding-like protein | HC |
chr4:52864244-52858917 | 20130731
Length = 431
Score = 87.4 bits (215), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 103/386 (26%), Positives = 170/386 (44%), Gaps = 54/386 (13%)
Query: 193 NNSHSSLGYAMEQGAPPVADDAQ-----PLYGEDIVFRILCPVEKVDRIIGESDGIVEFL 247
N + S Y + A D+++ P + VFR++ PV KV IIG +++
Sbjct: 10 NGTLQSESYTIFDAAANPTDESESEKRWPGWPGHCVFRLIVPVVKVGIIIGRKGELIKKT 69
Query: 248 QNEVGVDVRVINPVGGSNEQIVIVTSEEGPDDVLFPAQEALLHIQTRIVDLVLDKDN--- 304
E +RV++ G+ ++IV+++ +E + L PA +A+L I R+ L +N
Sbjct: 70 CEETHARIRVLDAPVGTPDRIVLISGKEDLEAPLSPAMDAILRIFKRVSGLSETDNNNTA 129
Query: 305 -----FITTRLVVPSSYIECLDGKD-ASLSEIRRLTGANIQILPREELPSCVAKTDELVQ 358
+ RL+V S+ L GK +S+ I+ TGA I++L +ELPS + ++
Sbjct: 130 AAGVALCSIRLLVASTQAINLIGKQGSSIKAIQENTGAVIRVLSGDELPSYAGADERIID 189
Query: 359 IVGEIKAARDAVVEVTSRLRSYLYRDFFQRDIVPPSASLPGFEASSSNNIS------LVA 412
+ GE A+ V LR +L S+ +P FE + + IS A
Sbjct: 190 LQGETLKVLKALEAVVGHLRKFLV----------DSSVIPLFEKTCNATISQDRQTDAWA 239
Query: 413 ETSSIYQNVQ-SMAAALPSKESGGSSFEAGKQ----------KESDRGDD-------VLG 454
+ S+Y Q S+ A +P+K SF A ++ S G D
Sbjct: 240 DKPSLYSASQPSIVADIPTKR---DSFFADRESQLDSLLSSSTMSLYGQDSSSISGLRSS 296
Query: 455 SLNRLAVPLVTRSTLEVVIPEYAVPKLTAKSRSKLAQISELSGANVTLVEDR-PDVTQKI 513
+ NR + +VT + IP + + + I SGA +T+ E R PD + I
Sbjct: 297 AFNRASASIVTTVIQTMQIPLSYAEDIIGIQGTNIDYIRRTSGAILTVQESRVPD--EII 354
Query: 514 IQISGTPEQAERAQSLLQGFILSTQE 539
++I GT Q + AQ L+Q I + E
Sbjct: 355 VEIKGTSTQVQTAQQLIQEVITNHNE 380
>Medtr1g070380.1 | poly(rC)-binding-like protein | HC |
chr1:31149691-31143604 | 20130731
Length = 567
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 86/167 (51%), Gaps = 8/167 (4%)
Query: 223 VFRILCPVEKVDRIIGESDGIVEFLQNEVGVDVRVINPVGGSNEQIVIVTSEEGPDDVLF 282
VFR+L P +KV IIG ++ + E V++++ G+ E+ V+V+++E PD +
Sbjct: 166 VFRMLVPAQKVGSIIGRKGEFIKKITEETRARVKILDGPQGTAERAVMVSAKEEPDRPIP 225
Query: 283 PAQEALLHIQTRIVDLVLDKDNFIT-------TRLVVPSSYIECLDGKDASLSEI-RRLT 334
PA E LL + ++ ++V + + TRL+V + L GK S +I + T
Sbjct: 226 PAVEGLLRVHKQVANVVSEPADTAQGAGRPSITRLLVADTQAGSLIGKQGSTIKIFQDST 285
Query: 335 GANIQILPREELPSCVAKTDELVQIVGEIKAARDAVVEVTSRLRSYL 381
G NI+IL E LP + D +V+I GE AV + LR +L
Sbjct: 286 GCNIRILGSEHLPIFALRDDSIVEIQGEPAGVHKAVELIALHLRKFL 332
>Medtr1g070380.3 | poly(rC)-binding-like protein | HC |
chr1:31149687-31143883 | 20130731
Length = 568
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 86/168 (51%), Gaps = 9/168 (5%)
Query: 223 VFRILCPVEKVDRIIGESDGIVEFLQNEVGVDVRVINPVGGSNEQIVIVTSEEGPDDVLF 282
VFR+L P +KV IIG ++ + E V++++ G+ E+ V+V+++E PD +
Sbjct: 166 VFRMLVPAQKVGSIIGRKGEFIKKITEETRARVKILDGPQGTAERAVMVSAKEEPDRPIP 225
Query: 283 PAQEALLHIQTRIVDLVLDKDNFIT-------TRLVVPSSYIECLDGKDASLSEI-RRLT 334
PA E LL + ++ ++V + + TRL+V + L GK S +I + T
Sbjct: 226 PAVEGLLRVHKQVANVVSEPADTAQGAGRPSITRLLVADTQAGSLIGKQGSTIKIFQDST 285
Query: 335 GANIQIL-PREELPSCVAKTDELVQIVGEIKAARDAVVEVTSRLRSYL 381
G NI+IL E LP + D +V+I GE AV + LR +L
Sbjct: 286 GCNIRILGSAEHLPIFALRDDSIVEIQGEPAGVHKAVELIALHLRKFL 333
>Medtr1g070380.2 | poly(rC)-binding-like protein | HC |
chr1:31149683-31143883 | 20130731
Length = 568
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 86/168 (51%), Gaps = 9/168 (5%)
Query: 223 VFRILCPVEKVDRIIGESDGIVEFLQNEVGVDVRVINPVGGSNEQIVIVTSEEGPDDVLF 282
VFR+L P +KV IIG ++ + E V++++ G+ E+ V+V+++E PD +
Sbjct: 166 VFRMLVPAQKVGSIIGRKGEFIKKITEETRARVKILDGPQGTAERAVMVSAKEEPDRPIP 225
Query: 283 PAQEALLHIQTRIVDLVLDKDNFIT-------TRLVVPSSYIECLDGKDASLSEI-RRLT 334
PA E LL + ++ ++V + + TRL+V + L GK S +I + T
Sbjct: 226 PAVEGLLRVHKQVANVVSEPADTAQGAGRPSITRLLVADTQAGSLIGKQGSTIKIFQDST 285
Query: 335 GANIQIL-PREELPSCVAKTDELVQIVGEIKAARDAVVEVTSRLRSYL 381
G NI+IL E LP + D +V+I GE AV + LR +L
Sbjct: 286 GCNIRILGSAEHLPIFALRDDSIVEIQGEPAGVHKAVELIALHLRKFL 333
>Medtr2g038020.1 | poly(rC)-binding-like protein | HC |
chr2:16509240-16516412 | 20130731
Length = 470
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 102/392 (26%), Positives = 170/392 (43%), Gaps = 49/392 (12%)
Query: 186 IATTNTRNNSHSSLGYAMEQGAPPVA------DDAQPLYGEDIVFRILCPVEKVDRIIGE 239
I T T N S + E G A + P + D VFR++ PV KV IIG
Sbjct: 28 IDTEATTNESTQEIETVTETGTDTAATAVTPPEQRWPGWPGDCVFRLIVPVGKVGGIIGR 87
Query: 240 SDGIVEFLQNEVGVDVRVINPVGGSNEQIVIVTSEEGPDDVLFPAQEALLHIQTRIVDLV 299
+++ L +E VRV++ G ++I++++ +E + + PA +A++ I R+ L
Sbjct: 88 KGDLIKKLCDETKARVRVLDADLGIPDRIILISGKEELEAAISPAMDAVIRIFKRVSGLS 147
Query: 300 -LDKDN-------FITTRLVVPSSYIECLDGKDAS-LSEIRRLTGANIQILPREELPSCV 350
D +N + RL+V S+ L GK + + I+ +GA++++L +E+
Sbjct: 148 ETDSENKGPAGVTLCSIRLLVASTQAISLIGKQGTIIRSIQESSGASVRVLSGDEVQYFA 207
Query: 351 AKTDELVQIVGEIKAARDAVVEVTSRLRSYLYRDFFQRDIVP-----PSASLP--GFEAS 403
+ +V + GE A+ V LR +L I+P +ASLP +A
Sbjct: 208 TAEERIVDLQGEALMVLKALEAVIGHLRKFL----VDHSILPVYEKTYNASLPQQDRQAE 263
Query: 404 SSNNISLVAETSSIYQNVQSMAAALPSKESGGSSF---------EAGKQKESDRGDD--- 451
+ ++ L+ TS SM + +P S F S G D
Sbjct: 264 TWSDKPLLHTTSQT-----SMFSDIPFPTKRDSVFADRESHLDSLLSSSTMSLYGQDSSL 318
Query: 452 ---VLGSLNRLAVPLVTRSTLEVVIPEYAVPKLTAKSRSKLAQISELSGANVTLVEDR-P 507
SL+R+ P+VT + IP + + + I SGA +T+ E R P
Sbjct: 319 SGVRSSSLSRVGAPIVTTVIQTMQIPLSYAEDIIGIQGTNIDYIRRTSGAILTVQESRVP 378
Query: 508 DVTQKIIQISGTPEQAERAQSLLQGFILSTQE 539
D + +++I GT Q + AQ L+Q I S +E
Sbjct: 379 D--EIVVEIKGTTSQVQTAQQLIQEVISSHRE 408
>Medtr7g080630.5 | poly(rC)-binding-like protein | HC |
chr7:30700621-30706773 | 20130731
Length = 306
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 97/177 (54%), Gaps = 22/177 (12%)
Query: 219 GEDIVFRILCPVEKVDRIIGESDGIVEFLQNEVGVDVRVINPVGGSNEQIVIVTSEEGPD 278
G+D++FRI+ P +++ ++IG+ ++ ++ ++++ + + E+++I++S++ D
Sbjct: 97 GQDVIFRIVVPSKQIGKVIGKEGCRIQKIREMTRANIKIADAIARHEERVIIISSKDN-D 155
Query: 279 DVLFPAQEALLHIQTRIVDLVLDKDN--------------FITTRLVVPSSYIECLDGKD 324
+++ A++AL +I +L+L +DN T RL++ S L G
Sbjct: 156 EMVTDAEKAL----EQIANLILKEDNSSFDASKLTAGHVAANTIRLLIAGSQAGGLIGMS 211
Query: 325 A-SLSEIRRLTGANIQILPREELPSCVA--KTDELVQIVGEIKAARDAVVEVTSRLR 378
++ ++R +GA I +L +LP C + ++D +VQ+ G++ A+ E+ +LR
Sbjct: 212 GQNIEKLRNSSGAMITVLAPSQLPLCASAHESDRVVQLSGDVSTVMKALEEIGCQLR 268
>Medtr7g080630.3 | poly(rC)-binding-like protein | HC |
chr7:30700618-30706480 | 20130731
Length = 312
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 97/177 (54%), Gaps = 22/177 (12%)
Query: 219 GEDIVFRILCPVEKVDRIIGESDGIVEFLQNEVGVDVRVINPVGGSNEQIVIVTSEEGPD 278
G+D++FRI+ P +++ ++IG+ ++ ++ ++++ + + E+++I++S++ D
Sbjct: 97 GQDVIFRIVVPSKQIGKVIGKEGCRIQKIREMTRANIKIADAIARHEERVIIISSKDN-D 155
Query: 279 DVLFPAQEALLHIQTRIVDLVLDKDN--------------FITTRLVVPSSYIECLDGKD 324
+++ A++AL +I +L+L +DN T RL++ S L G
Sbjct: 156 EMVTDAEKAL----EQIANLILKEDNSSFDASKLTAGHVAANTIRLLIAGSQAGGLIGMS 211
Query: 325 A-SLSEIRRLTGANIQILPREELPSCVA--KTDELVQIVGEIKAARDAVVEVTSRLR 378
++ ++R +GA I +L +LP C + ++D +VQ+ G++ A+ E+ +LR
Sbjct: 212 GQNIEKLRNSSGAMITVLAPSQLPLCASAHESDRVVQLSGDVSTVMKALEEIGCQLR 268
>Medtr7g080630.4 | poly(rC)-binding-like protein | HC |
chr7:30700618-30707328 | 20130731
Length = 379
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 97/177 (54%), Gaps = 22/177 (12%)
Query: 219 GEDIVFRILCPVEKVDRIIGESDGIVEFLQNEVGVDVRVINPVGGSNEQIVIVTSEEGPD 278
G+D++FRI+ P +++ ++IG+ ++ ++ ++++ + + E+++I++S++ D
Sbjct: 97 GQDVIFRIVVPSKQIGKVIGKEGCRIQKIREMTRANIKIADAIARHEERVIIISSKDN-D 155
Query: 279 DVLFPAQEALLHIQTRIVDLVLDKDN--------------FITTRLVVPSSYIECLDGKD 324
+++ A++AL +I +L+L +DN T RL++ S L G
Sbjct: 156 EMVTDAEKAL----EQIANLILKEDNSSFDASKLTAGHVAANTIRLLIAGSQAGGLIGMS 211
Query: 325 A-SLSEIRRLTGANIQILPREELPSCVA--KTDELVQIVGEIKAARDAVVEVTSRLR 378
++ ++R +GA I +L +LP C + ++D +VQ+ G++ A+ E+ +LR
Sbjct: 212 GQNIEKLRNSSGAMITVLAPSQLPLCASAHESDRVVQLSGDVSTVMKALEEIGCQLR 268
>Medtr7g080630.1 | poly(rC)-binding-like protein | HC |
chr7:30700618-30706480 | 20130731
Length = 379
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 97/177 (54%), Gaps = 22/177 (12%)
Query: 219 GEDIVFRILCPVEKVDRIIGESDGIVEFLQNEVGVDVRVINPVGGSNEQIVIVTSEEGPD 278
G+D++FRI+ P +++ ++IG+ ++ ++ ++++ + + E+++I++S++ D
Sbjct: 97 GQDVIFRIVVPSKQIGKVIGKEGCRIQKIREMTRANIKIADAIARHEERVIIISSKDN-D 155
Query: 279 DVLFPAQEALLHIQTRIVDLVLDKDN--------------FITTRLVVPSSYIECLDGKD 324
+++ A++AL +I +L+L +DN T RL++ S L G
Sbjct: 156 EMVTDAEKAL----EQIANLILKEDNSSFDASKLTAGHVAANTIRLLIAGSQAGGLIGMS 211
Query: 325 A-SLSEIRRLTGANIQILPREELPSCVA--KTDELVQIVGEIKAARDAVVEVTSRLR 378
++ ++R +GA I +L +LP C + ++D +VQ+ G++ A+ E+ +LR
Sbjct: 212 GQNIEKLRNSSGAMITVLAPSQLPLCASAHESDRVVQLSGDVSTVMKALEEIGCQLR 268
>Medtr7g080630.2 | poly(rC)-binding-like protein | HC |
chr7:30700618-30707393 | 20130731
Length = 379
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 97/177 (54%), Gaps = 22/177 (12%)
Query: 219 GEDIVFRILCPVEKVDRIIGESDGIVEFLQNEVGVDVRVINPVGGSNEQIVIVTSEEGPD 278
G+D++FRI+ P +++ ++IG+ ++ ++ ++++ + + E+++I++S++ D
Sbjct: 97 GQDVIFRIVVPSKQIGKVIGKEGCRIQKIREMTRANIKIADAIARHEERVIIISSKDN-D 155
Query: 279 DVLFPAQEALLHIQTRIVDLVLDKDN--------------FITTRLVVPSSYIECLDGKD 324
+++ A++AL +I +L+L +DN T RL++ S L G
Sbjct: 156 EMVTDAEKAL----EQIANLILKEDNSSFDASKLTAGHVAANTIRLLIAGSQAGGLIGMS 211
Query: 325 A-SLSEIRRLTGANIQILPREELPSCVA--KTDELVQIVGEIKAARDAVVEVTSRLR 378
++ ++R +GA I +L +LP C + ++D +VQ+ G++ A+ E+ +LR
Sbjct: 212 GQNIEKLRNSSGAMITVLAPSQLPLCASAHESDRVVQLSGDVSTVMKALEEIGCQLR 268
>Medtr5g049770.1 | RNA-binding KH domain protein | HC |
chr5:21769759-21766560 | 20130731
Length = 241
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 108/231 (46%), Gaps = 33/231 (14%)
Query: 314 SSYIECLDGKDA-SLSEIRRLTGANIQILPREELPSCVAKTDELVQIVGEIKAARDAVVE 372
SS + + GK ++S IR +G+NI++ P P C AK +EL+ I G + +A+ +
Sbjct: 28 SSQVGAIVGKGGKNISNIRNNSGSNIRVCP---APHCAAKDEELILITGGYRCIENALRK 84
Query: 373 VTSRLRSY-LYRDFFQRDIVPPSASL------PGFEASSSNNISLV---AETSSIYQNVQ 422
+TS +R+ L + + PS L F ++ + + +YQ
Sbjct: 85 ITSIIRNNPLTNEVLAEARIKPSFPLNKDTVRSKFITRKKSSFPFARVPPQNAGVYQ--- 141
Query: 423 SMAAALPSKESGGSSFEAGKQKESDRGDDVLGSLNRLAVPLVTRSTLEVVIPEYAVPKLT 482
A E+G S + E RG+ V VT +T+E+++ E+ +
Sbjct: 142 ----AKKVTENGESHTNLIENVEPGRGN---------IVATVTNTTVEIIVSEHVFGSVY 188
Query: 483 AKSRSKLAQISELSGANVTLVEDRPDVTQ--KIIQISGTPEQAERAQSLLQ 531
+ L +I ++SGA+VT+ + T K++ ISGTP+Q AQSLLQ
Sbjct: 189 GEDGGNLDRIRQISGADVTVFDPSSTGTSGGKVV-ISGTPDQTFAAQSLLQ 238
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 39/66 (59%), Gaps = 4/66 (6%)
Query: 80 VGCLMGKGGKIIEQMRMETKTQIRILPRDHNLPRCVSMSEEIVQVTGDVNAVKNALEVIS 139
VG ++GKGGK I +R + + IR+ P P C + EE++ +TG ++NAL I+
Sbjct: 31 VGAIVGKGGKNISNIRNNSGSNIRVCP----APHCAAKDEELILITGGYRCIENALRKIT 86
Query: 140 SRLRES 145
S +R +
Sbjct: 87 SIIRNN 92