Miyakogusa Predicted Gene

Lj1g3v0984610.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0984610.1 Non Characterized Hit- tr|I1JYR4|I1JYR4_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.17100 PE,65.62,0.004,
,CUFF.26647.1
         (41 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g091550.1 | ATP-dependent Clp protease regulatory subunit ...    51   2e-07

>Medtr3g091550.1 | ATP-dependent Clp protease regulatory subunit
          ClpX | HC | chr3:41648807-41642783 | 20130731
          Length = 581

 Score = 50.8 bits (120), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 27/36 (75%), Positives = 28/36 (77%), Gaps = 2/36 (5%)

Query: 2  AAAAFRSNPRSYKETATLALSQLRYFAFNCTRAANS 37
          AAAAFRS P   KE ATLALSQLRYFAFN T A +S
Sbjct: 3  AAAAFRSKPS--KEKATLALSQLRYFAFNYTHAGHS 36