Miyakogusa Predicted Gene

Lj1g3v0984590.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0984590.2 Non Characterized Hit- tr|I1JYR3|I1JYR3_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.34749
PE,55,0.00003,seg,NULL,CUFF.26640.2
         (413 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g491560.1 | defective in meristem silencing protein | HC |...   579   e-165
Medtr7g117665.1 | defective in meristem silencing protein | HC |...   341   8e-94
Medtr7g117665.2 | defective in meristem silencing protein | HC |...   329   4e-90
Medtr1g007990.1 | gamma-irradiation and mitomycin C induced prot...   179   6e-45
Medtr1g008050.1 | gamma-irradiation and mitomycin C induced prot...   172   4e-43

>Medtr3g491560.1 | defective in meristem silencing protein | HC |
           chr3:41658103-41651940 | 20130731
          Length = 417

 Score =  579 bits (1493), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 291/416 (69%), Positives = 331/416 (79%), Gaps = 16/416 (3%)

Query: 1   MF-QPPXXXXXXXXQHPAS-QGSSALVPVDLNENCAEAKGNVQNGEWTQAESNLRHSQIL 58
           MF QP           P S QGSSALVPV             +NGE+T+A+  +R SQ L
Sbjct: 1   MFPQPSNSNQHLVYTKPLSVQGSSALVPV-------------ENGEFTKADMIIRESQKL 47

Query: 59  QGDLDTLGMKIKQHEDXXXXXXXEKSKLDDVILHLQATVGRPESSSTTKAGNSGDPHLTT 118
           Q DL +LGMKIKQHED       EKS+LDD ILHLQ  +G+ +SSST K GN+ D H+TT
Sbjct: 48  QDDLRSLGMKIKQHEDKLSLLTTEKSQLDDAILHLQVAIGKSKSSSTAKIGNADDLHITT 107

Query: 119 EG-VNKQILQHEKSAAGILYELKTIHGAQVSQLSLTKDVVGIVAMLGKVEDDNLSRLFSE 177
           E  VNKQILQHEKSAAGIL ++KT HGAQ S L LT+DVVG+VAMLGKVEDDNLSRLFSE
Sbjct: 108 EEEVNKQILQHEKSAAGILCQVKTHHGAQASLLGLTQDVVGVVAMLGKVEDDNLSRLFSE 167

Query: 178 YLGADTMRAVVCRTYEGVKALEMYDNVGCINKSSGLHSLGAAIGRPLDGRFLVICLESLR 237
           YLG +T+ A+VCRTYEGVKALE+YD  G INKS GLH LGA+IGRPLDGRFLVICLESLR
Sbjct: 168 YLGVETVLAIVCRTYEGVKALELYDKEGYINKSCGLHGLGASIGRPLDGRFLVICLESLR 227

Query: 238 PYTGKYFLDDSERKLAILKPRFPNGECPPGFLGFAVNMINIDSCNLFCVTPSGYGLRETL 297
           PY GKY +DDS+RKL IL PR PNGECP GF+GFAVNMINID+  LFC+TPSGYGLRETL
Sbjct: 228 PYAGKYVVDDSQRKLDILNPRLPNGECPAGFIGFAVNMINIDNRYLFCLTPSGYGLRETL 287

Query: 298 FYNLFSRLQVYKTRAEMIQALPLISDGALSLDGGMVRSCGVFTLGNREDVDVKFPRPDKS 357
           FYNLFSRLQVYKTRAEMIQALP ISDGALSLDGGM+RSCGVF+LGNRE VDV+FPRP++ 
Sbjct: 288 FYNLFSRLQVYKTRAEMIQALPCISDGALSLDGGMIRSCGVFSLGNREAVDVRFPRPERP 347

Query: 358 TELDGEIETERQMKDIKWKKEKVLEDLKRERTLLDMAKFNFSKKKNDLLKLLEQSS 413
             LD  IE ERQM + +WKK+KV +DLKRE+T+LDMAKF+F+KKK+D LK L  SS
Sbjct: 348 LGLDQHIEMERQMMNTQWKKDKVFDDLKREKTMLDMAKFSFNKKKSDFLKYLATSS 403


>Medtr7g117665.1 | defective in meristem silencing protein | HC |
           chr7:48828885-48823621 | 20130731
          Length = 383

 Score =  341 bits (874), Expect = 8e-94,   Method: Compositional matrix adjust.
 Identities = 166/329 (50%), Positives = 231/329 (70%), Gaps = 3/329 (0%)

Query: 68  KIKQHEDXXXXXXXEKSKLDDVILHLQATVGRPESSSTTKAGNSGDPHLTTEGVNKQILQ 127
           +IK+HED       + ++L + ++ LQ ++G+  S++ TK+ N      T E   +QIL+
Sbjct: 43  QIKKHEDNIEFLNSQSNRLTESVVDLQMSLGKYHSTNVTKSENGNGAFHTEEETVEQILK 102

Query: 128 HEKSAAGILYELKTIHGAQVSQLSLTKDVVGIVAMLGKVEDDNLSRLFSEYLGADTMRAV 187
            E SAA I   +K     Q S L+  KD VG+VA L KVE D+LSR+ SEY+G +TM A+
Sbjct: 103 KENSAASIFCWIKA--NTQTSNLAFVKDAVGVVATLAKVESDDLSRILSEYVGLETMLAI 160

Query: 188 VCRTYEGVKALEMYDNVGCINKSSGLHSLGAAIGRPLDGRFLVICLESLRPYTGKYFLDD 247
           VC T EGVKALE YD  G +N + GLH +G++ G+ ++GRF+VICLE LRP+ G +  +D
Sbjct: 161 VCSTNEGVKALEKYDPEGTVNSTGGLHGIGSSTGKKINGRFVVICLEDLRPFVGGFVEND 220

Query: 248 SERKLAILKPRFPNGECPPGFLGFAVNMINIDSCNLFCVTPSGYGLRETLFYNLFSRLQV 307
            ++KLAI KPR PNGECPPGFL +AVNMI++DS  L  +T SG+GLRETLFY+LFSRLQ+
Sbjct: 221 PQKKLAIPKPRLPNGECPPGFLDYAVNMIHLDSNRLSFLTASGHGLRETLFYSLFSRLQI 280

Query: 308 YKTRAEMIQALPLISDGALSLDGGMVRSCGVFTLGNREDVDVKFPRPDKSTELDGE-IET 366
           YKTR EM+ ALP I+DGALSLDGGM+R CG+F LG+R+DV+VKFP     +++  +  E 
Sbjct: 281 YKTRNEMMLALPCITDGALSLDGGMIRKCGIFALGSRKDVEVKFPLIAGESDVPPDYTEA 340

Query: 367 ERQMKDIKWKKEKVLEDLKRERTLLDMAK 395
           E  ++ ++W+  K+  D++RE+ LLD  K
Sbjct: 341 EDVVRKLQWETSKLAADIQREQQLLDFRK 369


>Medtr7g117665.2 | defective in meristem silencing protein | HC |
           chr7:48828878-48823621 | 20130731
          Length = 397

 Score =  329 bits (843), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 165/343 (48%), Positives = 230/343 (67%), Gaps = 17/343 (4%)

Query: 68  KIKQHEDXXXXXXXEKSKLDDVILHLQATVGRPESSSTTKAGNSGDPHLTTEGVNKQILQ 127
           +IK+HED       + ++L + ++ LQ ++G+  S++ TK+ N      T E   +QIL+
Sbjct: 43  QIKKHEDNIEFLNSQSNRLTESVVDLQMSLGKYHSTNVTKSENGNGAFHTEEETVEQILK 102

Query: 128 HEKSAAGILYELKTIHGAQVSQLSLTKDVVGIVAMLGKVEDDNLSR-------------- 173
            E SAA I   +K     Q S L+  KD VG+VA L KVE D+LS               
Sbjct: 103 KENSAASIFCWIKA--NTQTSNLAFVKDAVGVVATLAKVESDDLSSWKYLLWSHLSSRFW 160

Query: 174 LFSEYLGADTMRAVVCRTYEGVKALEMYDNVGCINKSSGLHSLGAAIGRPLDGRFLVICL 233
           + SEY+G +TM A+VC T EGVKALE YD  G +N + GLH +G++ G+ ++GRF+VICL
Sbjct: 161 ILSEYVGLETMLAIVCSTNEGVKALEKYDPEGTVNSTGGLHGIGSSTGKKINGRFVVICL 220

Query: 234 ESLRPYTGKYFLDDSERKLAILKPRFPNGECPPGFLGFAVNMINIDSCNLFCVTPSGYGL 293
           E LRP+ G +  +D ++KLAI KPR PNGECPPGFL +AVNMI++DS  L  +T SG+GL
Sbjct: 221 EDLRPFVGGFVENDPQKKLAIPKPRLPNGECPPGFLDYAVNMIHLDSNRLSFLTASGHGL 280

Query: 294 RETLFYNLFSRLQVYKTRAEMIQALPLISDGALSLDGGMVRSCGVFTLGNREDVDVKFPR 353
           RETLFY+LFSRLQ+YKTR EM+ ALP I+DGALSLDGGM+R CG+F LG+R+DV+VKFP 
Sbjct: 281 RETLFYSLFSRLQIYKTRNEMMLALPCITDGALSLDGGMIRKCGIFALGSRKDVEVKFPL 340

Query: 354 PDKSTELDGE-IETERQMKDIKWKKEKVLEDLKRERTLLDMAK 395
               +++  +  E E  ++ ++W+  K+  D++RE+ LLD  K
Sbjct: 341 IAGESDVPPDYTEAEDVVRKLQWETSKLAADIQREQQLLDFRK 383


>Medtr1g007990.1 | gamma-irradiation and mitomycin C induced protein
           | LC | chr1:656620-665586 | 20130731
          Length = 1009

 Score =  179 bits (453), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 118/332 (35%), Positives = 183/332 (55%), Gaps = 17/332 (5%)

Query: 61  DLDTLGMKIKQHEDXXXXXXXEKSKLDDVILHLQATVGRPESSSTTKAGNSGDPHLTT-E 119
           D+  LG KI ++ED       ++ +    +L LQ  V         + GN+     TT E
Sbjct: 645 DICQLGQKINEYEDYLKKFNDQEDETHKELLMLQDNVQH------YQLGNADLLFATTKE 698

Query: 120 GVNKQILQHEKSAAGILYELKTIHGAQVSQLSLTKDVVGIVAMLGKVEDDNLSRLFSEYL 179
            +  +I   E SAA +L  L      +  Q    +D++G+VA+LG V+   LSR+ +EYL
Sbjct: 699 EMTTKIKNMENSAASVLCSLS---AREKQQNHFLEDIIGVVALLGSVQSPELSRMLAEYL 755

Query: 180 GADTMRAVVCRTYEGVKALEMYDNVGCINKSSGLHSLGAA-IGRPLDGRFLVICLESLRP 238
           G D M  V+CR+ +   +LE Y   G I+    L++  AA +G+ +  RF V+  E +RP
Sbjct: 756 GEDQMLGVICRSLDTAISLEKYKQNGEIDYVHALNAAEAASLGKAISRRFHVMGFEDIRP 815

Query: 239 YTGKYFLDDSERKLAILKPRFPNGECPPGFLGFAVNMINIDSCNLFCVTPSGYGLRETLF 298
           Y G    +DS+RKLA+  P+  N   P GF+G+AVNMI +++ +L   T SG+GLRET+ 
Sbjct: 816 YRGN-LQNDSQRKLALPDPKLSN-RTPEGFMGYAVNMIELNTHHLQARTASGHGLRETVL 873

Query: 299 YNLFSRLQVYKTRAEMIQALPLISDGALSLDGGMVRSCGVFTLGNREDVDVKFPRPDKST 358
           ++LF +L VYKT   M+ A+  I +GA+SLDGG++R  G  +LG      + FP  +K  
Sbjct: 874 FSLFKKLHVYKTSESMMAAIECIENGAVSLDGGIIRENGTLSLGFGNPY-IYFPCGNK-- 930

Query: 359 ELDGEIETERQMKDIKWKKEKVLEDLKRERTL 390
            +D   E  + +  I+ KK  +L+  K  +T+
Sbjct: 931 -MDIPPEATQMLNQIEKKKALLLKIEKGRKTV 961


>Medtr1g008050.1 | gamma-irradiation and mitomycin C induced protein,
            putative | HC | chr1:683455-698554 | 20130731
          Length = 1462

 Score =  172 bits (437), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 96/227 (42%), Positives = 138/227 (60%), Gaps = 9/227 (3%)

Query: 117  TTEGVNKQILQHEKSAAGILYELKTIHGAQVSQLSLTKDVVGIVAMLGKVEDDNLSRLFS 176
            T E V  +I   E SA  +L  L + H  Q  Q    +D++G+VA+LG V+   LSR+ +
Sbjct: 1157 TKEEVITKIKSMENSATSVLCSL-SAHEKQ--QNHFLEDIIGVVALLGSVKSPKLSRMLA 1213

Query: 177  EYLGADTMRAVVCRTYEGVKALEMYDNVGCINKSSGLHSLGAAIGRPL-DGRFLVICLES 235
            EYLG D M  V+CR+++   A+ +Y   G I+    LH+  A +G  +   RFLV+  E 
Sbjct: 1214 EYLGEDQMLGVICRSFD--TAVSLYKQNGEID---CLHAEAAGLGEAIISKRFLVMSFED 1268

Query: 236  LRPYTGKYFLDDSERKLAILKPRFPNGECPPGFLGFAVNMINIDSCNLFCVTPSGYGLRE 295
            LRPY G     D + KLA+  P+  NG  P GF+G+AVNMI++DS +L   T  G+GLRE
Sbjct: 1269 LRPYKGYLQEHDPQMKLALPNPKLHNGRTPAGFIGYAVNMIDLDSHHLQTRTALGHGLRE 1328

Query: 296  TLFYNLFSRLQVYKTRAEMIQALPLISDGALSLDGGMVRSCGVFTLG 342
            T+ ++LF +L VY+TR  M+ AL  I DGA+SLDGG++R     ++G
Sbjct: 1329 TVLFSLFKKLHVYETRENMVDALDCIEDGAVSLDGGIIRENRALSIG 1375