Miyakogusa Predicted Gene
- Lj1g3v0984480.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v0984480.1 tr|P93557|P93557_SESRO Mitotic cyclin OS=Sesbania
rostrata PE=2 SV=1,70.71,0,Cyclin_C,Cyclin, C-terminal;
Cyclin_N,Cyclin, N-terminal; CYCLIN-B,NULL; CYCLINE,NULL; no
descriptio,CUFF.26626.1
(240 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr7g089080.1 | cyclin | HC | chr7:34806771-34800306 | 20130731 318 2e-87
Medtr5g088980.1 | carboxy-terminal domain cyclin | HC | chr5:386... 264 5e-71
Medtr8g074000.1 | carboxy-terminal domain cyclin | HC | chr8:312... 191 8e-49
Medtr5g023790.1 | carboxy-terminal domain cyclin | HC | chr5:947... 190 8e-49
Medtr5g023790.3 | carboxy-terminal domain cyclin | HC | chr5:947... 170 1e-42
Medtr1g011470.1 | carboxy-terminal domain cyclin | HC | chr1:203... 152 3e-37
Medtr3g061680.1 | carboxy-terminal domain cyclin | LC | chr3:246... 152 4e-37
Medtr3g107970.1 | carboxy-terminal domain cyclin | HC | chr3:498... 151 6e-37
Medtr3g060410.1 | carboxy-terminal domain cyclin | LC | chr3:236... 149 2e-36
Medtr3g060770.1 | carboxy-terminal domain cyclin | LC | chr3:241... 148 4e-36
Medtr3g460990.1 | carboxy-terminal domain cyclin | LC | chr3:240... 147 1e-35
Medtr3g060400.1 | carboxy-terminal domain cyclin | LC | chr3:236... 147 1e-35
Medtr3g060820.1 | carboxy-terminal domain cyclin | LC | chr3:241... 145 4e-35
Medtr2g102550.1 | carboxy-terminal domain cyclin | HC | chr2:441... 145 5e-35
Medtr2g102520.1 | carboxy-terminal domain cyclin | HC | chr2:441... 144 7e-35
Medtr6g045270.1 | carboxy-terminal domain cyclin | LC | chr6:113... 140 1e-33
Medtr3g088405.1 | carboxy-terminal domain cyclin | HC | chr3:401... 138 4e-33
Medtr3g088415.1 | carboxy-terminal domain cyclin | HC | chr3:401... 137 6e-33
Medtr1g018680.1 | carboxy-terminal domain cyclin | HC | chr1:543... 133 1e-31
Medtr3g102520.1 | carboxy-terminal domain cyclin | HC | chr3:472... 124 7e-29
Medtr3g088415.2 | carboxy-terminal domain cyclin | HC | chr3:401... 124 9e-29
Medtr3g102560.1 | carboxy-terminal domain cyclin | HC | chr3:472... 119 3e-27
Medtr5g023790.2 | carboxy-terminal domain cyclin | HC | chr5:947... 117 7e-27
Medtr3g102510.1 | carboxy-terminal domain cyclin | HC | chr3:472... 114 1e-25
Medtr3g102530.1 | carboxy-terminal domain cyclin | HC | chr3:472... 106 2e-23
Medtr3g102540.1 | carboxy-terminal domain cyclin | LC | chr3:472... 100 2e-21
Medtr3g088415.3 | carboxy-terminal domain cyclin | HC | chr3:401... 97 2e-20
Medtr5g044040.1 | amine-terminal domain cyclin | LC | chr5:19364... 89 4e-18
Medtr5g011900.1 | amine-terminal domain cyclin | LC | chr5:35020... 85 5e-17
Medtr1g032850.1 | carboxy-terminal domain cyclin | HC | chr1:117... 77 2e-14
Medtr5g015670.1 | carboxy-terminal domain cyclin | HC | chr5:546... 69 3e-12
Medtr3g103080.1 | carboxy-terminal domain cyclin | HC | chr3:474... 64 1e-10
Medtr3g100710.1 | carboxy-terminal domain cyclin | HC | chr3:463... 63 2e-10
Medtr2g005960.1 | amine-terminal domain cyclin | LC | chr2:40294... 63 2e-10
Medtr4g080990.1 | carboxy-terminal domain cyclin | HC | chr4:312... 58 8e-09
Medtr2g011500.1 | carboxy-terminal domain cyclin | HC | chr2:280... 54 1e-07
Medtr8g063120.1 | carboxy-terminal domain cyclin | HC | chr8:264... 54 1e-07
Medtr8g063120.2 | carboxy-terminal domain cyclin | HC | chr8:264... 53 2e-07
Medtr5g032550.1 | carboxy-terminal domain cyclin | HC | chr5:139... 52 5e-07
Medtr5g032550.2 | carboxy-terminal domain cyclin | HC | chr5:139... 51 1e-06
Medtr5g035360.1 | carboxy-terminal domain cyclin | HC | chr5:153... 48 7e-06
>Medtr7g089080.1 | cyclin | HC | chr7:34806771-34800306 | 20130731
Length = 1318
Score = 318 bits (816), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 161/243 (66%), Positives = 196/243 (80%), Gaps = 8/243 (3%)
Query: 1 MESQPEIDQTMRAILVDWVIEVHVHLTRFHFSIETLYLTINIIDRFLSLITVPMRELQLV 60
M+SQPEI++ MR IL+DW+++VH ++F S ETLYLTINI+DRFL++ V RELQLV
Sbjct: 220 MDSQPEINERMRGILIDWLVDVH---SKFELSPETLYLTINIVDRFLAVNLVSRRELQLV 276
Query: 61 GVTAMLMASKYENNSKAPDVNFFVELSDETCSHEQILSMEKIILKKLEWNLSVPTPFVFL 120
G++AMLMASKYE P+VN FV LSD SHEQIL MEK IL KLEW L+VPTPFVFL
Sbjct: 277 GISAMLMASKYEE-IWPPEVNDFVCLSDRAYSHEQILIMEKTILGKLEWTLTVPTPFVFL 335
Query: 121 VRFIKASSIR--DPDEA-VENMAHFLCELGMMHYATLQYCPSMIASSAVFAARCTLNKSP 177
VRFIKA+S+ D+ +E MAHFL ELGMMHYATL+YCPSM+A+SAV+AAR TL+K+P
Sbjct: 336 VRFIKAASVSAVPSDQGDLEMMAHFLSELGMMHYATLRYCPSMLAASAVYAARSTLSKTP 395
Query: 178 SWNHTLEMHTGYSQQQLMDCATLLVSFHCRARNGKHKAVLYNKYSNPERGAVVMLPPAQN 237
WN TL+MHTGYS++QLMDCA LLVSFH A NGK K V+Y KYS+P++GAV LPPA+N
Sbjct: 396 VWNETLKMHTGYSEEQLMDCARLLVSFHSGAENGKLK-VVYKKYSDPQKGAVAALPPAKN 454
Query: 238 LVL 240
L+L
Sbjct: 455 LLL 457
>Medtr5g088980.1 | carboxy-terminal domain cyclin | HC |
chr5:38636983-38633820 | 20130731
Length = 421
Score = 264 bits (675), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 134/239 (56%), Positives = 176/239 (73%), Gaps = 8/239 (3%)
Query: 1 MESQPEIDQTMRAILVDWVIEVHVHLTRFHFSIETLYLTINIIDRFLSLITVPMRELQLV 60
M SQP+I+ MRAIL+DW+IEVH +F ET YLT+NI+DRFLS VP +ELQLV
Sbjct: 186 MASQPDINVKMRAILIDWLIEVH---RKFELMPETFYLTLNIVDRFLSTKAVPRKELQLV 242
Query: 61 GVTAMLMASKYENNSKAPDVNFFVELSDETCSHEQILSMEKIILKKLEWNLSVPTPFVFL 120
G+++ML+ASKYE AP+VN FV +SD EQ+L MEK IL+ LEW L+VPTP+VFL
Sbjct: 243 GISSMLIASKYEE-IWAPEVNDFVCISDNAYVREQVLVMEKTILRNLEWYLTVPTPYVFL 301
Query: 121 VRFIKASSIRDPDEAVENMAHFLCELGMMHYATLQ-YCPSMIASSAVFAARCTLNKSPSW 179
VR+IKAS+ D+ +E+M +FL EL MMHYAT+ YCPSMIA+SAV+AAR TL +SP W
Sbjct: 302 VRYIKAST--PSDKEMESMVNFLAELSMMHYATVSSYCPSMIAASAVYAARSTLERSPFW 359
Query: 180 NHTLEMHTGYSQQQLMDCATLLVSFHCRARNGKHKAVLYNKYSNPERGAVVMLPPAQNL 238
TL+ +TGYS++QL DCA L+ SFH A + +A+ Y K+ + +R AV ++ PA+NL
Sbjct: 360 TDTLKHYTGYSEEQLRDCAKLMASFHSAAPESRLRAI-YKKFCSSDRCAVALMTPAKNL 417
>Medtr8g074000.1 | carboxy-terminal domain cyclin | HC |
chr8:31292669-31296642 | 20130731
Length = 434
Score = 191 bits (484), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 100/235 (42%), Positives = 154/235 (65%), Gaps = 8/235 (3%)
Query: 1 MESQPEIDQTMRAILVDWVIEVHVHLTRFHFSIETLYLTINIIDRFLSLITVPMRELQLV 60
M+ Q ++++ MRAILVDW+IEVH +F ETL+LT+N+IDRFL+ V ++LQLV
Sbjct: 198 MDEQLDLNERMRAILVDWLIEVH---DKFDLMQETLFLTVNLIDRFLAKQNVVRKKLQLV 254
Query: 61 GVTAMLMASKYENNSKAPDVNFFVELSDETCSHEQILSMEKIILKKLEWNLSVPTPFVFL 120
G+ AML+A KYE S P V+ + ++D + + IL MEK +L L++N+S+PT +VF+
Sbjct: 255 GLVAMLLACKYEEVS-VPVVSDLIHIADRAYTRKDILEMEKSMLNTLQYNMSLPTAYVFM 313
Query: 121 VRFIKASSIRDPDEAVENMAHFLCELGMMHYATLQYCPSMIASSAVFAARCTLNKSPSWN 180
RF+KA+ D+ +E +A FL EL ++ Y L++ PS++A++AV+ A+CT++ WN
Sbjct: 314 RRFLKAAQ---ADKKLELVAFFLVELSLVEYEMLKFPPSLVAAAAVYTAQCTVSGFKHWN 370
Query: 181 HTLEMHTGYSQQQLMDCATLLVSFHCRARNGKHKAVLYNKYSNPERGAVVMLPPA 235
T E HT YS+ QL++C+ L+V FH +A GK V + KY + + PA
Sbjct: 371 KTCEWHTNYSEDQLLECSMLMVGFHQKAGAGKLTGV-HRKYGSAKFSFTAKCEPA 424
>Medtr5g023790.1 | carboxy-terminal domain cyclin | HC |
chr5:9472333-9468437 | 20130731
Length = 428
Score = 190 bits (483), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 99/226 (43%), Positives = 151/226 (66%), Gaps = 11/226 (4%)
Query: 1 MESQPEIDQTMRAILVDWVIEVHVHLTRFHFSIETLYLTINIIDRFLSLITVPMRELQLV 60
M Q +I++ MRAILVDW+IEVH +F ETL+LT+N+IDRFL +V ++LQLV
Sbjct: 194 MAQQFDINERMRAILVDWLIEVH---DKFDLMHETLFLTVNLIDRFLEKQSVVRKKLQLV 250
Query: 61 GVTAMLMASKYENNSKAPDVNFFVELSDETCSHEQILSMEKIILKKLEWNLSVPTPFVFL 120
G+ AML+A KYE S P V + +SD + +++L MEK+++ L++N+SVPT +VF+
Sbjct: 251 GLVAMLLACKYEEVS-VPVVGDLILISDRAYTRKEVLEMEKVMVNALKFNISVPTAYVFM 309
Query: 121 VRFIKASSIRDPDEAVENMAHFLCELGMMHYATLQYCPSMIASSAVFAARCTLNKSPSWN 180
RF+KA+ D +E +A FL EL ++ YA L++ PS +A++AV+ A+CT+ W+
Sbjct: 310 RRFLKAAQA---DRKLELLAFFLIELSLVEYAMLKFPPSQLAAAAVYTAQCTMYGVKQWS 366
Query: 181 HTLEMHTGYSQQQLMDCATLLVSFHCRARNGK----HKAVLYNKYS 222
T E HT YS+ QL++C++L+V FH +A GK H+ +K+S
Sbjct: 367 KTCEWHTNYSEDQLLECSSLMVDFHKKAGTGKLTGAHRKYGTSKFS 412
>Medtr5g023790.3 | carboxy-terminal domain cyclin | HC |
chr5:9472324-9468202 | 20130731
Length = 381
Score = 170 bits (430), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 88/195 (45%), Positives = 132/195 (67%), Gaps = 7/195 (3%)
Query: 1 MESQPEIDQTMRAILVDWVIEVHVHLTRFHFSIETLYLTINIIDRFLSLITVPMRELQLV 60
M Q +I++ MRAILVDW+IEVH +F ETL+LT+N+IDRFL +V ++LQLV
Sbjct: 194 MAQQFDINERMRAILVDWLIEVH---DKFDLMHETLFLTVNLIDRFLEKQSVVRKKLQLV 250
Query: 61 GVTAMLMASKYENNSKAPDVNFFVELSDETCSHEQILSMEKIILKKLEWNLSVPTPFVFL 120
G+ AML+A KYE S P V + +SD + +++L MEK+++ L++N+SVPT +VF+
Sbjct: 251 GLVAMLLACKYEEVS-VPVVGDLILISDRAYTRKEVLEMEKVMVNALKFNISVPTAYVFM 309
Query: 121 VRFIKASSIRDPDEAVENMAHFLCELGMMHYATLQYCPSMIASSAVFAARCTLNKSPSWN 180
RF+KA+ D +E +A FL EL ++ YA L++ PS +A++AV+ A+CT+ W+
Sbjct: 310 RRFLKAAQA---DRKLELLAFFLIELSLVEYAMLKFPPSQLAAAAVYTAQCTMYGVKQWS 366
Query: 181 HTLEMHTGYSQQQLM 195
T E HT YS+ QL+
Sbjct: 367 KTCEWHTNYSEDQLL 381
>Medtr1g011470.1 | carboxy-terminal domain cyclin | HC |
chr1:2038488-2033308 | 20130731
Length = 422
Score = 152 bits (384), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 94/234 (40%), Positives = 135/234 (57%), Gaps = 8/234 (3%)
Query: 4 QPEIDQTMRAILVDWVIEVHVHLTRFHFSIETLYLTINIIDRFLSLITVPMRELQLVGVT 63
Q +I MR ILVDW++EV F +TLYL +N+IDRFLS + R LQL+G+T
Sbjct: 187 QQDITPGMRGILVDWLVEVA---DEFKLVPDTLYLAVNLIDRFLSQRLITKRRLQLLGIT 243
Query: 64 AMLMASKYENNSKAPDVNFFVELSDETCSHEQILSMEKIILKKLEWNLSVPTPFVFLVRF 123
ML++SKYE AP V F ++D T S +++L MEK +L L + L+VPT FL RF
Sbjct: 244 CMLISSKYEEIC-APGVEDFCVITDNTYSRQEVLKMEKEVLNLLHFQLAVPTIKTFLRRF 302
Query: 124 IKA--SSIRDPDEAVENMAHFLCELGMMHYATLQYCPSMIASSAVFAARCTLNKSP-SWN 180
I+ +S + +E +A++L EL ++ Y+ LQ+ PS IA+S+V AR TLN+S WN
Sbjct: 303 IQVAQTSSKVAQADLEFLANYLAELALVEYSFLQFQPSKIAASSVLLARWTLNQSEHPWN 362
Query: 181 HTLEMHTGYSQQQLMDCATLLVSFHCRARNGKHKAVLYNKYSNPERGAVVMLPP 234
TLE +T Y +L L+ + + AV KY + + +V L P
Sbjct: 363 PTLEHYTNYKASELKTTVLELIDLQLNTKRCRLNAV-REKYQHQKFNSVANLSP 415
>Medtr3g061680.1 | carboxy-terminal domain cyclin | LC |
chr3:24614151-24614996 | 20130731
Length = 281
Score = 152 bits (383), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 86/224 (38%), Positives = 138/224 (61%), Gaps = 13/224 (5%)
Query: 6 EIDQTMRAILVDWVIEVHVHLTRFHFSIETLYLTINIIDRFLSLI---TVPMRELQLVGV 62
++D MR +VDW+I+ H ETLYL +NI+DR LS I M +L+L+G+
Sbjct: 45 KVDFQMRMNVVDWLIQTHYEQ---KLMPETLYLCVNILDRVLSKIKFEVTTMDKLKLIGL 101
Query: 63 TAMLMASKYENNSKAP--DVNFFVELSDETCSHEQILSMEKIILKKLEWNLSVPTPFVFL 120
+++L+ASKYE S DV + ++D E+I MEK+IL++L W L+VPTP+VFL
Sbjct: 102 SSLLLASKYEQRSAVGVYDVEY---MADYIYMPEEICQMEKLILQELGWILTVPTPYVFL 158
Query: 121 VRFIKASSIRDPDEAVENMAHFLCELGMMHYATL-QYCPSMIASSAVFAARCTLNKSPSW 179
VR ++A + D D+ +ENM F EL + + + + Y PSMIA+ +V+ AR + + P W
Sbjct: 159 VRNMRACLLSDQDKIMENMVFFFSELSLTNQSIVCDYKPSMIAACSVYCARFVVGRYPFW 218
Query: 180 NHTLEMHTGYSQQQLMDCATLLVSFHCRARNGKHKAVLYNKYSN 223
++ L+M TGYS+++L+ CA +++ C G ++ K+S+
Sbjct: 219 SNDLKMCTGYSEEKLLSCANVMIK-SCSQICGDGIMEVFKKFSS 261
>Medtr3g107970.1 | carboxy-terminal domain cyclin | HC |
chr3:49887211-49892757 | 20130731
Length = 478
Score = 151 bits (381), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 94/234 (40%), Positives = 132/234 (56%), Gaps = 8/234 (3%)
Query: 4 QPEIDQTMRAILVDWVIEVHVHLTRFHFSIETLYLTINIIDRFLSLITVPMRELQLVGVT 63
Q +I +MR IL+DW++EV + +TLYLT+N+IDRFLS + LQL+GVT
Sbjct: 239 QQDISPSMRGILIDWLVEVS---EEYKLVPDTLYLTVNLIDRFLSTSLIQKHRLQLLGVT 295
Query: 64 AMLMASKYENNSKAPDVNFFVELSDETCSHEQILSMEKIILKKLEWNLSVPTPFVFLVRF 123
M +ASKYE AP V F ++D T + E+++ MEK +L L + LSVPT F+ RF
Sbjct: 296 CMFIASKYEEMC-APRVEEFCFITDNTYTKEEVVKMEKEVLNLLRFQLSVPTTKTFIRRF 354
Query: 124 IKA--SSIRDPDEAVENMAHFLCELGMMHYATLQYCPSMIASSAVFAARCTLNKSP-SWN 180
I+A SS + P +E +A++L EL ++ Y+ LQ+ PS +A+SAVF AR TLN S W
Sbjct: 355 IQAAQSSYKVPLAELEFLANYLAELTLVEYSFLQFLPSRVAASAVFLARWTLNHSEHPWT 414
Query: 181 HTLEMHTGYSQQQLMDCATLLVSFHCRARNGKHKAVLYNKYSNPERGAVVMLPP 234
TLE T Y +L L + A+ KY + + V L P
Sbjct: 415 TTLEHFTNYKASELKPVVLALEDLQLNTKGCSLHAI-REKYKHEKFNGVAKLSP 467
>Medtr3g060410.1 | carboxy-terminal domain cyclin | LC |
chr3:23691060-23693543 | 20130731
Length = 362
Score = 149 bits (376), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 83/201 (41%), Positives = 127/201 (63%), Gaps = 8/201 (3%)
Query: 6 EIDQTMRAILVDWVIEVHVHLTRFHFSIETLYLTINIIDRFLSLITV---PMRELQLVGV 62
++D +R +VDW+I+ H ETLYL +NI+DR LS I M +L+L+G+
Sbjct: 130 KVDSQLRKNVVDWLIQTHYQQK---LMPETLYLCVNILDRVLSKINFEVKTMEKLKLIGL 186
Query: 63 TAMLMASKYENNSKAPDVNFFVELSDETCSHEQILSMEKIILKKLEWNLSVPTPFVFLVR 122
+++L+ASKYE +A V L+D E+I MEK+IL++L W L+VPTP+VFLVR
Sbjct: 187 SSLLLASKYEQR-RAVGVYDVEYLADYIYMPEEICQMEKLILQELGWILTVPTPYVFLVR 245
Query: 123 FIKASSIRDPDEAVENMAHFLCELGMM-HYATLQYCPSMIASSAVFAARCTLNKSPSWNH 181
I+A ++ D D+ +E+M F EL + H Y PSMIA+ AV+ AR + + P W++
Sbjct: 246 NIRACNLSDEDKIMEHMVFFFSELSLTNHSIVCDYKPSMIAACAVYLARFIVGRYPFWSN 305
Query: 182 TLEMHTGYSQQQLMDCATLLV 202
L+M TGYS+ +L+ CA +++
Sbjct: 306 DLKMCTGYSEDKLLSCAHVMM 326
>Medtr3g060770.1 | carboxy-terminal domain cyclin | LC |
chr3:24109546-24108680 | 20130731
Length = 288
Score = 148 bits (374), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 81/202 (40%), Positives = 127/202 (62%), Gaps = 8/202 (3%)
Query: 6 EIDQTMRAILVDWVIEVHVHLTRFHFSIETLYLTINIIDRFLSLI---TVPMRELQLVGV 62
++D MR I+VDW+I+ H + ETLYL +NI+DRFLS I M +L+L+G+
Sbjct: 55 KVDFLMRKIVVDWLIQTHY---KQKLMPETLYLCVNILDRFLSKIEFEVTTMDKLKLMGL 111
Query: 63 TAMLMASKYENNSKAPDVNFFVELSDETCSHEQILSMEKIILKKLEWNLSVPTPFVFLVR 122
+++L+ASKYE S V ++D ++I MEK+IL++L W L+VPTP+VFL+R
Sbjct: 112 SSLLLASKYEQRS-VVGVYDIEGMADYIYMPKEICQMEKLILQELGWILTVPTPYVFLIR 170
Query: 123 FIKASSIRDPDEAVENMAHFLCELGMM-HYATLQYCPSMIASSAVFAARCTLNKSPSWNH 181
I+ + D D+ +E M F EL + H Y PSMIA+ +V+ AR + + P W++
Sbjct: 171 NIRTCLLSDEDKIMEKMVFFFSELSLTNHSIVCDYKPSMIAACSVYCARFVVERYPFWSN 230
Query: 182 TLEMHTGYSQQQLMDCATLLVS 203
L+M TGYS+ +L+ CA++++
Sbjct: 231 DLKMCTGYSEDKLLSCASVMMD 252
>Medtr3g460990.1 | carboxy-terminal domain cyclin | LC |
chr3:24061471-24062322 | 20130731
Length = 283
Score = 147 bits (370), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 85/222 (38%), Positives = 133/222 (59%), Gaps = 9/222 (4%)
Query: 6 EIDQTMRAILVDWVIEVHVHLTRFHFSIETLYLTINIIDRFLSLITVP---MRELQLVGV 62
++D +R +VDW+I+ H ET YL +NI+DR LS I M +L+L+G+
Sbjct: 51 KVDSQIRKNVVDWLIQTHYEQK---LMPETFYLCVNILDRVLSKINFEVKTMEKLKLIGL 107
Query: 63 TAMLMASKYENNSKAPDVNFFVELSDETCSHEQILSMEKIILKKLEWNLSVPTPFVFLVR 122
+++L+ASKYE KA V ++D E+I MEK+IL++L W L+VPTP+VFLVR
Sbjct: 108 SSLLLASKYEQR-KAVGVYHVEYMADYIYMPEEICQMEKLILQELGWILTVPTPYVFLVR 166
Query: 123 FIKASSIRDPDEAVENMAHFLCELGMM-HYATLQYCPSMIASSAVFAARCTLNKSPSWNH 181
+KA D D+ +ENM F EL + H Y PS+IA+ +V+ AR + + P W++
Sbjct: 167 NVKACVSSDEDKIMENMVFFFSELSLTNHSIVCDYKPSLIAACSVYCARFVVERYPFWSN 226
Query: 182 TLEMHTGYSQQQLMDCATLLVSFHCRARNGKHKAVLYNKYSN 223
L+M TGYS++ L+ CA +++ C G+ ++ K+S+
Sbjct: 227 DLKMCTGYSEENLLSCAHVMMK-SCIQICGEGIMEVFKKFSS 267
>Medtr3g060400.1 | carboxy-terminal domain cyclin | LC |
chr3:23689234-23690085 | 20130731
Length = 283
Score = 147 bits (370), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 85/222 (38%), Positives = 133/222 (59%), Gaps = 9/222 (4%)
Query: 6 EIDQTMRAILVDWVIEVHVHLTRFHFSIETLYLTINIIDRFLSLITVP---MRELQLVGV 62
++D +R +VDW+I+ H ET YL +NI+DR LS I M +L+L+G+
Sbjct: 51 KVDSQIRKNVVDWLIQTHYEQK---LMPETFYLCVNILDRVLSKINFEVKTMEKLKLIGL 107
Query: 63 TAMLMASKYENNSKAPDVNFFVELSDETCSHEQILSMEKIILKKLEWNLSVPTPFVFLVR 122
+++L+ASKYE KA V ++D E+I MEK+IL++L W L+VPTP+VFLVR
Sbjct: 108 SSLLLASKYEQR-KAVGVYHVEYMADYIYMPEEICQMEKLILQELGWILTVPTPYVFLVR 166
Query: 123 FIKASSIRDPDEAVENMAHFLCELGMM-HYATLQYCPSMIASSAVFAARCTLNKSPSWNH 181
+KA D D+ +ENM F EL + H Y PS+IA+ +V+ AR + + P W++
Sbjct: 167 NVKACVSSDEDKIMENMVFFFSELSLTNHSIVCDYKPSLIAACSVYCARFVVERYPFWSN 226
Query: 182 TLEMHTGYSQQQLMDCATLLVSFHCRARNGKHKAVLYNKYSN 223
L+M TGYS++ L+ CA +++ C G+ ++ K+S+
Sbjct: 227 DLKMCTGYSEENLLSCAHVMMK-SCIQICGEGIMEVFKKFSS 267
>Medtr3g060820.1 | carboxy-terminal domain cyclin | LC |
chr3:24117223-24116390 | 20130731
Length = 277
Score = 145 bits (365), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 84/224 (37%), Positives = 134/224 (59%), Gaps = 13/224 (5%)
Query: 6 EIDQTMRAILVDWVIEVHVHLTRFHFSIETLYLTINIIDRFLSLI---TVPMRELQLVGV 62
++D MR +VDW+I+ H ETLYL +N++DR LS I + +L+L+G+
Sbjct: 45 KVDFQMRKNVVDWLIQTHYEQKLMP---ETLYLCVNVLDRVLSKIKFEVTTVDKLKLIGL 101
Query: 63 TAMLMASKYENNS--KAPDVNFFVELSDETCSHEQILSMEKIILKKLEWNLSVPTPFVFL 120
+++L+ASKYE S DV + ++D E+I MEK+IL+KL W L+VPTP+VFL
Sbjct: 102 SSLLLASKYEQRSVVGVYDVEY---MADYIYMPEEICQMEKLILQKLGWILTVPTPYVFL 158
Query: 121 VRFIKASSIRDPDEAVENMAHFLCELGMM-HYATLQYCPSMIASSAVFAARCTLNKSPSW 179
VR I+A + D D+ +ENM F E+ + H Y PS+IA+ +V+ AR + + P W
Sbjct: 159 VRNIRACLLSDEDKIMENMVFFFSEVSLTNHSIVCDYKPSLIAACSVYCARFVVERYPFW 218
Query: 180 NHTLEMHTGYSQQQLMDCATLLVSFHCRARNGKHKAVLYNKYSN 223
++ L++ TGYS++ L CA +++ C G ++ K+S+
Sbjct: 219 SNDLKICTGYSEENLWSCANVMMK-SCIQICGDGHMEVFKKFSS 261
>Medtr2g102550.1 | carboxy-terminal domain cyclin | HC |
chr2:44178430-44174949 | 20130731
Length = 429
Score = 145 bits (365), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 89/234 (38%), Positives = 135/234 (57%), Gaps = 7/234 (2%)
Query: 4 QPEIDQTMRAILVDWVIEVHVHLTRFHFSIETLYLTINIIDRFLSLITVPMRELQLVGVT 63
Q +I MRAIL+DW++EV +F+ TLYLT+ +ID FLS ++ ++ LQL+G+T
Sbjct: 193 QRDITPGMRAILIDWLVEVS---EQFNLQANTLYLTVYLIDWFLSKNSIEIKRLQLLGIT 249
Query: 64 AMLMASKYENNSKAPDVNFFVELSDETCSHEQILSMEKIILKKLEWNLSVPTPFVFLVRF 123
ML+ASKYE A + F ++D T + E++L+ME +LK + LS PT FL RF
Sbjct: 250 CMLIASKYE-EINANHIEDFCVMTDNTYTREEVLNMEIQVLKSSAYQLSAPTTKHFLRRF 308
Query: 124 IKA--SSIRDPDEAVENMAHFLCELGMMHYATLQYCPSMIASSAVFAARCTLNKSP-SWN 180
++A +S + P +E +A++L EL +M+Y L + PSMIA+SAVF AR TL++S WN
Sbjct: 309 LRAAQASYQRPSVELEYLANYLAELTLMNYGFLNFFPSMIAASAVFLARWTLDQSRHPWN 368
Query: 181 HTLEMHTGYSQQQLMDCATLLVSFHCRARNGKHKAVLYNKYSNPERGAVVMLPP 234
TLE + Y L L + + + + A+ + G V+ P
Sbjct: 369 PTLEHYASYKASDLKATVLALQNLQLNSDDCPYPAIRTKYRQSKFHGVAVLSSP 422
>Medtr2g102520.1 | carboxy-terminal domain cyclin | HC |
chr2:44171841-44168809 | 20130731
Length = 479
Score = 144 bits (363), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 85/202 (42%), Positives = 123/202 (60%), Gaps = 9/202 (4%)
Query: 4 QPEIDQTMRAILVDWVIEVHVHLTRFHFSIETLYLTINIIDRFLSLITVPMRELQLVGVT 63
Q +I +MRAILVDW++EV + TLYLT+ +ID FLS + LQL+G+T
Sbjct: 241 QQDITPSMRAILVDWLVEVSEG---YKLQANTLYLTVYLIDWFLSKNCIERERLQLLGIT 297
Query: 64 AMLMASKYENNSKAPDVNFFVELSDETCSHEQILSMEKIILKKLEWNLSVPTPFVFLVRF 123
ML+ASKYE AP + F ++D T + E+++ +E ++LK + L PT FL RF
Sbjct: 298 CMLIASKYEE-VNAPRIEDFCFITDNTYTKEEVVKLESLVLKSSSYQLFAPTTKTFLRRF 356
Query: 124 IKAS--SIRDPDEAVENMAHFLCELGMMHYATLQYCPSMIASSAVFAARCTLNKSP-SWN 180
++A+ S + P +E +A++L EL +M+Y L + PSMIA+SAVF AR TL++S WN
Sbjct: 357 LRAAQASYKRPSIELEYLANYLAELTLMNYGFLNFLPSMIAASAVFLARWTLDQSSHPWN 416
Query: 181 HTLEMHTGYSQQQLMDCATLLV 202
TLE + Y L AT+L
Sbjct: 417 PTLEHYASYKASDLK--ATVLA 436
>Medtr6g045270.1 | carboxy-terminal domain cyclin | LC |
chr6:11390216-11391181 | 20130731
Length = 321
Score = 140 bits (352), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 83/202 (41%), Positives = 126/202 (62%), Gaps = 20/202 (9%)
Query: 7 IDQTMRAILVDWVIEVHVHLTRFHFSIETLYLTINIIDRFLSLI---TVPMRELQLVGVT 63
I+ R +L+D +I+ H L + + ETLYL +NIIDRFLS + + PM +++ V
Sbjct: 70 INCDERKLLIDSIIDAHYAL---NLAPETLYLCVNIIDRFLSKLNPPSTPMEKIKFVPHI 126
Query: 64 AMLMASKYENNSKAPDVNFFVELSDETCSHEQILSMEKIILKKLEWNLSVPTPFVFLVRF 123
++L+ASKYE K V V + E + EK+IL+KL+WNL+V TP+VFLVR
Sbjct: 127 SLLLASKYEQRHKL-HVRDLVHIPPEV-----VCETEKLILQKLDWNLTVTTPYVFLVR- 179
Query: 124 IKASSIRDPDEAVENMAHFLCELGMMHYATL-QYCPSMIASSAVFAARCTLNKSPSWNHT 182
+I+D D+ +ENM F EL + HY+ + Y PSMIA+SAV+ AR + + P WN+
Sbjct: 180 ----NIKDEDKMMENMVFFFSELSLTHYSIVCDYKPSMIAASAVYCARIVIGRYPLWNND 235
Query: 183 LEM--HTGYSQQQLMDCATLLV 202
L++ TGYS+++L CA +++
Sbjct: 236 LKICTGTGYSEKELRSCAMVMI 257
>Medtr3g088405.1 | carboxy-terminal domain cyclin | HC |
chr3:40170176-40175369 | 20130731
Length = 510
Score = 138 bits (348), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 85/227 (37%), Positives = 132/227 (58%), Gaps = 16/227 (7%)
Query: 4 QPEIDQTMRAILVDWVIEVHVHLTRFHFSIETLYLTINIIDRFLSLITVPMRELQLVGVT 63
Q +I+ +MRA+L+DW++EV + +TL+L +N +DR+LS + ++LQL+GVT
Sbjct: 269 QKKINASMRAMLIDWLVEV---ADEYRLLPDTLFLAVNYLDRYLSGKAMNTQQLQLLGVT 325
Query: 64 AMLMASKYENNSKAPDVNFFVELSDETCSHEQILSMEKIILKKLEWNLSVPTPFVFLVRF 123
M++A+KYE AP V F ++D T S EQ+L ME +L L++ ++ PT FL RF
Sbjct: 326 CMMIAAKYEEIC-APKVEEFCYVTDNTYSKEQVLEMESSVLNFLKFEMTAPTIRCFLRRF 384
Query: 124 IKAS--SIRDPDEAVENMAHFLCELGMMHYATLQYCPSMIASSAVFAARCTL--NKSPSW 179
I + + P +E +A ++ +L ++ Y L+Y PS+IA+SA F A+ L K+P W
Sbjct: 385 ITVAQQTCEIPLMQLEYLADYVADLSLLEYDMLKYTPSLIAASATFLAKYILLSTKNP-W 443
Query: 180 NHTLEMHTGYSQQQLMDCATLLVSFHCRARNGKHKA----VLYNKYS 222
N L +TGY +L +C L H RNG H + + KYS
Sbjct: 444 NSMLRHYTGYQASELRECVEGL---HLLYRNGYHSSPSITAIREKYS 487
>Medtr3g088415.1 | carboxy-terminal domain cyclin | HC |
chr3:40179537-40182656 | 20130731
Length = 505
Score = 137 bits (346), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 80/216 (37%), Positives = 127/216 (58%), Gaps = 7/216 (3%)
Query: 4 QPEIDQTMRAILVDWVIEVHVHLTRFHFSIETLYLTINIIDRFLSLITVPMRELQLVGVT 63
Q +I+ +MRAIL+DW++EV + +TLYLT+N IDR+LS + ++LQL+GV
Sbjct: 266 QKDINPSMRAILIDWLVEV---AEEYRLVPDTLYLTVNYIDRYLSGNPMNRQQLQLLGVA 322
Query: 64 AMLMASKYENNSKAPDVNFFVELSDETCSHEQILSMEKIILKKLEWNLSVPTPFVFLVRF 123
+M++ASKYE AP V F ++D T +++L ME +L L++ ++ PT FL RF
Sbjct: 323 SMMIASKYEEIC-APQVEEFCYITDNTYFKDEVLQMESTVLNFLKFEMTAPTIKCFLRRF 381
Query: 124 IKASSIRD--PDEAVENMAHFLCELGMMHYATLQYCPSMIASSAVFAARCTLNKS-PSWN 180
++A+ D P +E + +F+ EL ++ Y+ L Y PS+IA+S++F A+ L + WN
Sbjct: 382 VRAAQGIDEVPSLQLECLTNFIAELSLLEYSMLCYAPSLIAASSIFLAKYMLFPAMKPWN 441
Query: 181 HTLEMHTGYSQQQLMDCATLLVSFHCRARNGKHKAV 216
TL+ +T Y L C L C + N A+
Sbjct: 442 PTLQHYTQYQPSDLCACVKDLHRLCCNSPNSNLPAI 477
>Medtr1g018680.1 | carboxy-terminal domain cyclin | HC |
chr1:5434143-5436837 | 20130731
Length = 363
Score = 133 bits (335), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 84/233 (36%), Positives = 131/233 (56%), Gaps = 8/233 (3%)
Query: 4 QPEIDQTMRAILVDWVIEVHVHLTRFHFSIETLYLTINIIDRFLSLITVPMRELQLVGVT 63
Q +++ +MR +LVDW++EV + +TLY +++ IDRFLSL + ++LQL+GV
Sbjct: 119 QRDVNASMRGVLVDWLVEVA---EEYKLVSDTLYFSVSYIDRFLSLNDLTRQKLQLLGVA 175
Query: 64 AMLMASKYENNSKAPDVNFFVELSDETCSHEQILSMEKIILKKLEWNLSVPTPFVFL--V 121
+ML+ASKYE K P+V F ++D T S E++L+ME ILK L++ L PT FL V
Sbjct: 176 SMLVASKYE-EIKPPEVEDFCYITDNTYSKEEVLTMEADILKSLKFELGGPTIKTFLRHV 234
Query: 122 RFIKASSIRDPDEAVENMAHFLCELGMMHYATLQYCPSMIASSAVFAARCTLN-KSPSWN 180
FI S+ + E + +L EL ++ Y +++ PSM+A+S VF AR L+ K+ WN
Sbjct: 235 CFIDYVSLYASELQFEFLCSYLAELSLLDYNCVKFLPSMVAASVVFLARFMLSPKTHPWN 294
Query: 181 HTLEMHTGYSQQQLMDCATLLVSFHCRARNGKHKAVLYNKYSNPERGAVVMLP 233
+ T Y L +C + + + G +AV +KY + V P
Sbjct: 295 SAIYEFTRYKPADLKECVLNIHDLYLGRKGGSLQAVR-DKYKQHKFKCVATTP 346
>Medtr3g102520.1 | carboxy-terminal domain cyclin | HC |
chr3:47250517-47247642 | 20130731
Length = 372
Score = 124 bits (311), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 79/233 (33%), Positives = 125/233 (53%), Gaps = 8/233 (3%)
Query: 4 QPEIDQTMRAILVDWVIEVHVHLTRFHFSIETLYLTINIIDRFLSLITVPMRELQLVGVT 63
Q I MR LVDW++EV + ETL+L+++ IDRFLS+ V +LQL+GV+
Sbjct: 119 QRGISSNMRGTLVDWLVEVA---DEYKLLPETLHLSVSYIDRFLSIEPVSRSKLQLLGVS 175
Query: 64 AMLMASKYENNSKAPDVNFFVELSDETCSHEQILSMEKIILKKLEWNLSVPTPFVFLVRF 123
+ML+ASKYE + V+ F +++D T E++L ME ILK L + + P FL RF
Sbjct: 176 SMLIASKYEEITPPKAVD-FCQITDNTYDLEEVLKMEADILKSLNFEMGNPNVITFLKRF 234
Query: 124 IKAS--SIRDPDEAVENMAHFLCELGMMHYATLQYCPSMIASSAVFAARCTLNKSP-SWN 180
I + + ++ + E + +L +L ++ Y ++ PS++A+S +F AR + W
Sbjct: 235 IGIACENRKNSNLQFEFLCSYLADLSLLDYECTRFLPSVVAASVIFLARFIIRPGAHPWT 294
Query: 181 HTLEMHTGYSQQQLMDCATLLVSFHCRARNGKHKAVLYNKYSNPERGAVVMLP 233
+L GY+ L DC +L + + G KAV +KY + V LP
Sbjct: 295 PSLCECLGYTSANLEDCVIILHDLYMSRKAGSFKAV-RDKYKQNKLKCVANLP 346
>Medtr3g088415.2 | carboxy-terminal domain cyclin | HC |
chr3:40179537-40182268 | 20130731
Length = 443
Score = 124 bits (311), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 67/169 (39%), Positives = 109/169 (64%), Gaps = 6/169 (3%)
Query: 4 QPEIDQTMRAILVDWVIEVHVHLTRFHFSIETLYLTINIIDRFLSLITVPMRELQLVGVT 63
Q +I+ +MRAIL+DW++EV + +TLYLT+N IDR+LS + ++LQL+GV
Sbjct: 266 QKDINPSMRAILIDWLVEVA---EEYRLVPDTLYLTVNYIDRYLSGNPMNRQQLQLLGVA 322
Query: 64 AMLMASKYENNSKAPDVNFFVELSDETCSHEQILSMEKIILKKLEWNLSVPTPFVFLVRF 123
+M++ASKYE AP V F ++D T +++L ME +L L++ ++ PT FL RF
Sbjct: 323 SMMIASKYEEIC-APQVEEFCYITDNTYFKDEVLQMESTVLNFLKFEMTAPTIKCFLRRF 381
Query: 124 IKASSIRD--PDEAVENMAHFLCELGMMHYATLQYCPSMIASSAVFAAR 170
++A+ D P +E + +F+ EL ++ Y+ L Y PS+IA+S++F A+
Sbjct: 382 VRAAQGIDEVPSLQLECLTNFIAELSLLEYSMLCYAPSLIAASSIFLAK 430
>Medtr3g102560.1 | carboxy-terminal domain cyclin | HC |
chr3:47265371-47267354 | 20130731
Length = 324
Score = 119 bits (297), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 71/214 (33%), Positives = 121/214 (56%), Gaps = 8/214 (3%)
Query: 4 QPEIDQTMRAILVDWVIEVHVHLTRFHFSIETLYLTINIIDRFLSLITVPMRELQLVGVT 63
Q +ID MR IL+DW++EV + + +TL+ ++ IDRFLS + +LQL+GV+
Sbjct: 92 QRDIDPKMRGILIDWLVEV---VEEYKLQNDTLHRAVSYIDRFLSYYPICRVKLQLLGVS 148
Query: 64 AMLMASKYENNSKAPDVNFFVELSDETCSHEQILSMEKIILKKLEWNLSVPTPFVFLVRF 123
+M +ASKYE + P V ++D T + +++L ME ILK L+ +L PT FL +
Sbjct: 149 SMYIASKYE-DINPPHVEELCFITDNTYNRDEVLEMETDILKTLDNDLGSPTVKTFLRQE 207
Query: 124 IKASSIRDPDEAVENMAHFLCELGMMHYATLQYCPSMIASSAVFAARCTL-NKSPSWNHT 182
I S+ + E ++++L EL ++ YA +++ PS++A+S AR + K+ W
Sbjct: 208 IAKSA---SNLQFEFLSNYLAELSLLDYACVRFLPSLVAASITLLARFIVWPKTYPWPSA 264
Query: 183 LEMHTGYSQQQLMDCATLLVSFHCRARNGKHKAV 216
L+ ++GY +L +C +L + R G +A
Sbjct: 265 LQEYSGYKPVELKECVLILHDLYMSRREGSFEAT 298
>Medtr5g023790.2 | carboxy-terminal domain cyclin | HC |
chr5:9472324-9468437 | 20130731
Length = 357
Score = 117 bits (294), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 61/127 (48%), Positives = 90/127 (70%), Gaps = 4/127 (3%)
Query: 1 MESQPEIDQTMRAILVDWVIEVHVHLTRFHFSIETLYLTINIIDRFLSLITVPMRELQLV 60
M Q +I++ MRAILVDW+IEVH +F ETL+LT+N+IDRFL +V ++LQLV
Sbjct: 194 MAQQFDINERMRAILVDWLIEVH---DKFDLMHETLFLTVNLIDRFLEKQSVVRKKLQLV 250
Query: 61 GVTAMLMASKYENNSKAPDVNFFVELSDETCSHEQILSMEKIILKKLEWNLSVPTPFVFL 120
G+ AML+A KYE S P V + +SD + +++L MEK+++ L++N+SVPT +VF+
Sbjct: 251 GLVAMLLACKYEEVS-VPVVGDLILISDRAYTRKEVLEMEKVMVNALKFNISVPTAYVFM 309
Query: 121 VRFIKAS 127
RF+KA+
Sbjct: 310 RRFLKAA 316
>Medtr3g102510.1 | carboxy-terminal domain cyclin | HC |
chr3:47243553-47241418 | 20130731
Length = 340
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/233 (32%), Positives = 122/233 (52%), Gaps = 8/233 (3%)
Query: 4 QPEIDQTMRAILVDWVIEVHVHLTRFHFSIETLYLTINIIDRFLSLITVPMRELQLVGVT 63
Q I MR LVDW++EV T ETL+L+++ IDRFLS + +LQL+GV+
Sbjct: 100 QRGITSNMRGTLVDWLVEVADEYTLLP---ETLHLSVSYIDRFLSNQPIIRSKLQLLGVS 156
Query: 64 AMLMASKYENNSKAPDVNFFVELSDETCSHEQILSMEKIILKKLEWNLSVPTPFVFLVRF 123
+ML+ASKYE + ++ F +++D T +++L ME ILK L + + P FL F
Sbjct: 157 SMLIASKYEEITPPKAID-FCQITDNTYDLDEVLKMEADILKTLNFEMGNPNVITFLKSF 215
Query: 124 IKASS--IRDPDEAVENMAHFLCELGMMHYATLQYCPSMIASSAVFAARCTLNKSP-SWN 180
+ +S + + E + ++L ++ ++ Y +++ PS++A+S +F AR L W
Sbjct: 216 VGIASENQKTSNLQFEYLCNYLADISLLDYECIRFMPSIVAASVIFLARFILRPGVHPWT 275
Query: 181 HTLEMHTGYSQQQLMDCATLLVSFHCRARNGKHKAVLYNKYSNPERGAVVMLP 233
+L GY +L +C +L + R KAV KY + V LP
Sbjct: 276 SSLCECLGYKSAELEECVMILHDLYLSRRAASFKAV-REKYKQQKFKYVANLP 327
>Medtr3g102530.1 | carboxy-terminal domain cyclin | HC |
chr3:47254814-47252673 | 20130731
Length = 352
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/235 (32%), Positives = 123/235 (52%), Gaps = 12/235 (5%)
Query: 4 QPEIDQTMRAILVDWVIEVHVHLTRFHFSIETLYLTINIIDRFLSLITVPMRELQLVGVT 63
Q + MR ILVDW++EV + +TL+L ++ IDRFLS +V +LQL+GV+
Sbjct: 112 QRGVTANMRGILVDWLVEVA---EEYKLLPQTLHLAVSYIDRFLSNESVNRSKLQLLGVS 168
Query: 64 AMLMASKYENNSKAPDVNFFVELSDETCSHEQILSMEKIILKKLEWNLSVPTPFVFLVRF 123
+ML+ASKYE S V+ F +++D T +Q++ ME ILK L + + P FL +
Sbjct: 169 SMLIASKYEEISPPKAVD-FCQITDNTYELKQVIKMEADILKSLNFEMGNPHVNTFLKEY 227
Query: 124 IKASS--IRDPDEAVENMAHFLCELGMMHYATLQYCPSMIASSAVFAARCTLNKSPS--- 178
I ++ ++ +E + ++L EL ++ Y +++ PSM+A+S +F AR + P
Sbjct: 228 IGPATEDLKTSKLQMEFLCNYLAELSLIDYECIRFLPSMVAASVIFLARFII--CPGVHP 285
Query: 179 WNHTLEMHTGYSQQQLMDCATLLVSFHCRARNGKHKAVLYNKYSNPERGAVVMLP 233
+L Y +L +C +L + R KAV KY + V LP
Sbjct: 286 LTSSLSECLFYKSAELEECVLILHDLYLVRRAASLKAV-REKYKQHKFKNVANLP 339
>Medtr3g102540.1 | carboxy-terminal domain cyclin | LC |
chr3:47258291-47259784 | 20130731
Length = 277
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/234 (32%), Positives = 119/234 (50%), Gaps = 12/234 (5%)
Query: 4 QPEIDQTMRAILVDWVIEVHVHLTRFHFSIETLYLTINIIDRFLSLITVPMRELQLVGVT 63
Q I +R LVDW++EV + +TL+L ++ ID FLS + L+L+GV+
Sbjct: 37 QRYITPELRGKLVDWLVEVA---EEYKLHNDTLHLAVSYIDIFLSSHPIRRINLELLGVS 93
Query: 64 AMLMASKYENNSKAPDVNFFVELSDETCSHEQILSMEKIILKKLEWNLSVPTPFVFLVRF 123
+ +ASKYE+ + P V + + + E++ ME ILK L+++LS PT FL
Sbjct: 94 SFYIASKYEDIT-PPQVQDLCFTTRDKFNKEEVQEMENKILKTLDFDLSNPTVMTFLR-- 150
Query: 124 IKASSIRDPDEAVENMAHFLCELGMMHYATLQYCPSMIASSAVFAARCTL-NKSPSWNHT 182
+ S+ D E + ++L EL ++ Y L + PS++A+S VF AR KS W T
Sbjct: 151 -QESAKSDSYLQFEFLTNYLAELSLLDYDCLSFLPSLVAASVVFLARIIFWPKSLPWA-T 208
Query: 183 LEMHTGYSQQQLMDCATLLVSFHCRARNGKHKAVLYNKYSNPERGAVVML--PP 234
L+ ++ Y +L +C +L H + KA+ KY E V L PP
Sbjct: 209 LQEYSEYKPVELRECVLVLHDLHTSEKGASFKAI-RTKYKQHEFEYVADLSSPP 261
>Medtr3g088415.3 | carboxy-terminal domain cyclin | HC |
chr3:40179537-40181795 | 20130731
Length = 397
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 51/124 (41%), Positives = 81/124 (65%), Gaps = 4/124 (3%)
Query: 4 QPEIDQTMRAILVDWVIEVHVHLTRFHFSIETLYLTINIIDRFLSLITVPMRELQLVGVT 63
Q +I+ +MRAIL+DW++EV + +TLYLT+N IDR+LS + ++LQL+GV
Sbjct: 266 QKDINPSMRAILIDWLVEV---AEEYRLVPDTLYLTVNYIDRYLSGNPMNRQQLQLLGVA 322
Query: 64 AMLMASKYENNSKAPDVNFFVELSDETCSHEQILSMEKIILKKLEWNLSVPTPFVFLVRF 123
+M++ASKYE AP V F ++D T +++L ME +L L++ ++ PT FL RF
Sbjct: 323 SMMIASKYEEIC-APQVEEFCYITDNTYFKDEVLQMESTVLNFLKFEMTAPTIKCFLRRF 381
Query: 124 IKAS 127
++A+
Sbjct: 382 VRAA 385
>Medtr5g044040.1 | amine-terminal domain cyclin | LC |
chr5:19364442-19364868 | 20130731
Length = 128
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 49/78 (62%), Positives = 57/78 (73%), Gaps = 1/78 (1%)
Query: 36 LYLTINIIDRFLSLITVPMRELQLVGVTAMLMASKYENNSKAPDVNFFVELSDETCSHEQ 95
L LTINI+DRFL++ V RELQLVG++AMLM SKYE P+VN FV LSD SHEQ
Sbjct: 7 LCLTINIVDRFLAINLVSRRELQLVGISAMLMTSKYE-EIWPPEVNDFVCLSDRAYSHEQ 65
Query: 96 ILSMEKIILKKLEWNLSV 113
IL MEK I+ LEW L+V
Sbjct: 66 ILIMEKTIMGMLEWTLTV 83
>Medtr5g011900.1 | amine-terminal domain cyclin | LC |
chr5:3502095-3501016 | 20130731
Length = 241
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 61/155 (39%), Positives = 86/155 (55%), Gaps = 13/155 (8%)
Query: 3 SQPEIDQTMRAILVDWVIEVHVHLTRFHFSIETLYLTINIIDRFLSLITVPMRELQLVGV 62
SQ I + R L+D VI +H T++ S E+L+L +NI+DRFL +V +L+LVG+
Sbjct: 94 SQSNIYISRRPKLLDRVIGIH---TKYAISQESLFLAMNIVDRFLVARSVREEKLRLVGM 150
Query: 63 TAMLMASKYENNSKAPDVNFFVELSDETCSHEQILSMEKIILKKLEWNLSVPTPFVFLVR 122
A L+A KY V+ FV L D + QIL +E+ L L+V TPF FL
Sbjct: 151 GAWLIAYKY-GGIWHLKVDTFVTLPDNPYTRAQILWIEEETSGALNRKLTVSTPFHFLSL 209
Query: 123 FIKASSIRDPDEA-----VENMAHFLCELGMMHYA 152
F KA PD+ +ENM +FL ELGM+++
Sbjct: 210 FFKAP----PDDTYNNFLLENMTYFLSELGMINFT 240
>Medtr1g032850.1 | carboxy-terminal domain cyclin | HC |
chr1:11757673-11761366 | 20130731
Length = 555
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 99/191 (51%), Gaps = 13/191 (6%)
Query: 11 MRAILVDWVIEVHVHLTRFHFSIETLYLTINIIDRFLSLITVPM-RELQLVGVTAMLMAS 69
R+ +V W++E H R ET++L IN++DRFLS R LQ+VG+ + +A+
Sbjct: 371 QRSRMVHWIVE---HSYRKQLRPETMFLAINLLDRFLSKGYFKAERNLQIVGIACLTLAT 427
Query: 70 KYENNSKAPDV---NFFVELSDETCSHEQILSMEKIILKKLEWNLSVPTPFVFLVRFIKA 126
+ E N + V NF++E S S ++++ME ++ + LE+ PT + FL ++KA
Sbjct: 428 RIEENQQYNRVNQKNFYIEKS--VYSRCEVVAMEWMVQEVLEFECFHPTIYNFLCFYLKA 485
Query: 127 SSIRDPDEAVENMAHFLCELGMMHYATLQYCPSMIASSAVFAARCTLNKSPSWNHTLEMH 186
+ + D VE L L + L Y PS IA++ V A LN+ S + + +H
Sbjct: 486 A---NADAVVEKRVTCLALLALSGPDQLCYWPSTIAAAIVILASLELNQKAS-HKVIGIH 541
Query: 187 TGYSQQQLMDC 197
++ L +C
Sbjct: 542 IRSKEENLHEC 552
>Medtr5g015670.1 | carboxy-terminal domain cyclin | HC |
chr5:5464504-5462357 | 20130731
Length = 353
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 78/157 (49%), Gaps = 9/157 (5%)
Query: 16 VDWVIEVHVHLTRFHFSIETLYLTINIIDRFLSLITVPMRE---LQLVGVTAMLMASKYE 72
+DW+ +F F+++T YL+IN DRFLS ++ + +QL+ V + +A+K E
Sbjct: 107 IDWIFNTQA---KFGFTVQTAYLSINYFDRFLSKRSIDESKPWAIQLLSVACLSIAAKME 163
Query: 73 NNSKAPDVNFFVELSDETCSHEQILSMEKIILKKLEWNLSVPTPFVFLVRFIKASSIRDP 132
S P + +E E ++ I +ME +IL LEW + +PTPF +L F
Sbjct: 164 EQSVPPLSEYPIEYRFE---NKVIKNMELLILSTLEWKMGLPTPFAYLHYFFTKFCNGSR 220
Query: 133 DEAVENMAHFLCELGMMHYATLQYCPSMIASSAVFAA 169
E + A + + + PS IAS+++ AA
Sbjct: 221 SETIITKATQHIVTMVKDFNLMNQRPSTIASASILAA 257
>Medtr3g103080.1 | carboxy-terminal domain cyclin | HC |
chr3:47495355-47493059 | 20130731
Length = 320
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 78/157 (49%), Gaps = 9/157 (5%)
Query: 8 DQTMRAIL--VDWVIEVHVHLTRFHFSIETLYLTINIIDRFLSLITVPMRE---LQLVGV 62
D RA L ++W+++ L FHF ET YL++ +DRFLS + + ++L+ +
Sbjct: 61 DSFKRARLNAINWILKKREALD-FHF--ETAYLSVTYLDRFLSKHFIDGEKDWAMRLLSI 117
Query: 63 TAMLMASKYENNSKAPDVNFFVELSDETCSHEQILSMEKIILKKLEWNLSVPTPFVFLVR 122
+ +A+K E P+++ F D + I ME +L L+WN+ + TPF FL
Sbjct: 118 ACLSLAAKMEE-CNVPELSQFQLEDDYVFEGKVIQKMELFVLSSLDWNMGIITPFSFLSY 176
Query: 123 FIKASSIRDPDEAVENMAHFLCELGMMHYATLQYCPS 159
FIK S P + N H + + M + + + PS
Sbjct: 177 FIKKFSNESPSPIISNTMHPIFTVVMEEFNLMDHKPS 213
>Medtr3g100710.1 | carboxy-terminal domain cyclin | HC |
chr3:46343463-46340451 | 20130731
Length = 362
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 67/132 (50%), Gaps = 8/132 (6%)
Query: 6 EIDQTMRAILVDWVIEVHVHLTRFHFSIETLYLTINIIDRFLSLITVPMRE---LQLVGV 62
++D R ++DW+ +V H F F YL+IN +DRFLS+ P +QL+ V
Sbjct: 91 DLDFEARNEVIDWIQKVRAH---FGFGPLCAYLSINYMDRFLSVYEFPKGRAWTMQLLAV 147
Query: 63 TAMLMASKYENNSKAPDVNFFVELSDETCSHEQILSMEKIILKKLEWNLSVPTPFVFLVR 122
+ +A+K E + ++ + S + I ME ++L L+W + TPF F+
Sbjct: 148 ACLSLAAKVEETAVPQPLDLQIGESKFVFEAKTIQRMELLVLSTLKWRMQAITPFSFIEC 207
Query: 123 FIKASSIRDPDE 134
F+ S I+D D+
Sbjct: 208 FL--SKIKDDDK 217
>Medtr2g005960.1 | amine-terminal domain cyclin | LC |
chr2:402942-401842 | 20130731
Length = 234
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 44/67 (65%), Gaps = 3/67 (4%)
Query: 6 EIDQTMRAILVDWVIEVHVHLTRFHFSIETLYLTINIIDRFLSLITVPMRELQLVGVTAM 65
E + + + VDW+++VH R E L+LTINIIDR+LSL ++P R+L LV + +M
Sbjct: 163 ETEDAINNLNVDWLVKVHY---RLELQTEALFLTINIIDRYLSLTSIPKRDLMLVAICSM 219
Query: 66 LMASKYE 72
+A KY+
Sbjct: 220 SLADKYK 226
>Medtr4g080990.1 | carboxy-terminal domain cyclin | HC |
chr4:31294716-31295744 | 20130731
Length = 342
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 66/142 (46%), Gaps = 8/142 (5%)
Query: 6 EIDQTMRAILVDWVIEVHVHLTRFHFSIETLYLTINIIDRFLSLITVPMRE---LQLVGV 62
++D R +DW+ +V H F F +YL+IN +DRFLS P R +QL+ V
Sbjct: 86 DLDFGARNEAIDWIQKVQSH---FGFGPLCVYLSINYMDRFLSAYQFPERRDWSMQLLAV 142
Query: 63 TAMLMASKYENNSKAPDVNFFVELSDETCSHEQILSMEKIILKKLEWNLSVPTPFVFLVR 122
+ +A+K + + + S + I +E ++L L+W + TPF F+
Sbjct: 143 ACLSLAAKVDETDVPRILELQIGESKFVFEAKTIQKIELLVLTTLKWRMQAITPFSFIEY 202
Query: 123 FIKASSIRDPDEAVENMAHFLC 144
F+ S I D ++ N C
Sbjct: 203 FL--SKINDDKSSLNNSIILQC 222
>Medtr2g011500.1 | carboxy-terminal domain cyclin | HC |
chr2:2803180-2800861 | 20130731
Length = 306
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 73/141 (51%), Gaps = 18/141 (12%)
Query: 37 YLTINIIDRFLSLITVPMRE---LQLVGVTAMLMASKYENNSKAPDVNFFVELSDETCS- 92
YL IN + RF+S P + ++L+ ++ + +ASK +N + P F +L E C+
Sbjct: 106 YLAINYLHRFMSKQEFPQGKPWLIRLIVISCLSLASKMKN-THLP----FSKLQKEGCNF 160
Query: 93 -HEQILSMEKIILKKLEWNLSVPTPFVFLVRFIKASSIRD---PDEAVENMAHFLCELGM 148
E I ME +IL L+W + TPF FL FI + I+D D A E + + ++
Sbjct: 161 NGETIQKMELVILGALDWRMRSITPFPFLNFFISLAQIKDRSLKDRAAEIIFNVHNDIKF 220
Query: 149 MHYATLQYCPSMIASSAVFAA 169
L+Y PS +A++++ A
Sbjct: 221 -----LEYKPSTVAAASLIYA 236
>Medtr8g063120.1 | carboxy-terminal domain cyclin | HC |
chr8:26438234-26434719 | 20130731
Length = 355
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 97/204 (47%), Gaps = 15/204 (7%)
Query: 7 IDQTMRAILVDWVIEVHVHLTRFHFSIETLYLTINIIDRFLSLITVPMRE---LQLVGVT 63
++ + R + W+++VH + + F T YL++N +DRFL +P LQL+ V
Sbjct: 89 LESSTREEAIAWILKVHEY---YGFQPLTAYLSVNYMDRFLDSRPLPESNGWPLQLLSVA 145
Query: 64 AMLMASKYENNSKAPDVNFFVELSDETCSHEQILSMEKIILKKLEWNLSVPTPFVFLVRF 123
+ +A+K E ++F +E + IL ME ++L L+W L TP FL F
Sbjct: 146 CLSLAAKMEEPLVPSLLDFQIEGAKYIFQPRTILRMELLVLTILDWRLRSITPLSFLSFF 205
Query: 124 -IKASSIRDPDEAVENMAHFLCELGMMHYATLQYCPSMIASSAVFAARCTLNKSPSWN-- 180
K S + + A + + + L Y PS IA++A+ +A N+ P+W+
Sbjct: 206 ACKLDSTGTFTHFIISRATEIILSNIQDASFLTYRPSCIAAAAILSA---ANEIPNWSFV 262
Query: 181 ---HTLEMHTGYSQQQLMDCATLL 201
H G S+++++ C L+
Sbjct: 263 NPEHAESWCEGLSKEKIIGCYELI 286
>Medtr8g063120.2 | carboxy-terminal domain cyclin | HC |
chr8:26438234-26434719 | 20130731
Length = 283
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 60/120 (50%), Gaps = 6/120 (5%)
Query: 7 IDQTMRAILVDWVIEVHVHLTRFHFSIETLYLTINIIDRFLSLITVPMRE---LQLVGVT 63
++ + R + W+++VH + + F T YL++N +DRFL +P LQL+ V
Sbjct: 89 LESSTREEAIAWILKVHEY---YGFQPLTAYLSVNYMDRFLDSRPLPESNGWPLQLLSVA 145
Query: 64 AMLMASKYENNSKAPDVNFFVELSDETCSHEQILSMEKIILKKLEWNLSVPTPFVFLVRF 123
+ +A+K E ++F +E + IL ME ++L L+W L TP FL F
Sbjct: 146 CLSLAAKMEEPLVPSLLDFQIEGAKYIFQPRTILRMELLVLTILDWRLRSITPLSFLSFF 205
>Medtr5g032550.1 | carboxy-terminal domain cyclin | HC |
chr5:13982616-13985265 | 20130731
Length = 346
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 66/135 (48%), Gaps = 7/135 (5%)
Query: 6 EIDQTMRAILVDWVIEVHVHLTRFHFSIETLYLTINIIDRFLSLITVPMR---ELQLVGV 62
++D ++R +DW+ + H + + F +L L++N +DRFLS+ P +QL+ V
Sbjct: 86 DLDLSVRREALDWIWKAHAY---YGFGPLSLCLSVNYLDRFLSVFQFPRGVTWTVQLLAV 142
Query: 63 TAMLMASKYENNSKAPDVNFFVELSDETCSHEQILSMEKIILKKLEWNLSVPTPFVFLVR 122
+A+K E V+ V + I ME +IL L W + TP F+
Sbjct: 143 ACFSLAAKMEEVKVPQSVDLQVGEPKFVFQAKTIQRMELMILSSLGWKMRALTPCSFIDY 202
Query: 123 FI-KASSIRDPDEAV 136
F+ K S + PD+++
Sbjct: 203 FLAKISCEKYPDKSL 217
>Medtr5g032550.2 | carboxy-terminal domain cyclin | HC |
chr5:13982619-13985265 | 20130731
Length = 272
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 66/135 (48%), Gaps = 7/135 (5%)
Query: 6 EIDQTMRAILVDWVIEVHVHLTRFHFSIETLYLTINIIDRFLSLITVPMR---ELQLVGV 62
++D ++R +DW+ + H + + F +L L++N +DRFLS+ P +QL+ V
Sbjct: 86 DLDLSVRREALDWIWKAHAY---YGFGPLSLCLSVNYLDRFLSVFQFPRGVTWTVQLLAV 142
Query: 63 TAMLMASKYENNSKAPDVNFFVELSDETCSHEQILSMEKIILKKLEWNLSVPTPFVFLVR 122
+A+K E V+ V + I ME +IL L W + TP F+
Sbjct: 143 ACFSLAAKMEEVKVPQSVDLQVGEPKFVFQAKTIQRMELMILSSLGWKMRALTPCSFIDY 202
Query: 123 FI-KASSIRDPDEAV 136
F+ K S + PD+++
Sbjct: 203 FLAKISCEKYPDKSL 217
>Medtr5g035360.1 | carboxy-terminal domain cyclin | HC |
chr5:15376779-15381259 | 20130731
Length = 334
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 55/120 (45%), Gaps = 6/120 (5%)
Query: 7 IDQTMRAILVDWVIEVHVHLTRFHFSIETLYLTINIIDRFLSLITVPMRE---LQLVGVT 63
D R + W+++V + + F T YL +N +DRFL+ +P LQL+ V
Sbjct: 72 FDSDARDESIRWILKVQGY---YGFQPVTAYLAVNYMDRFLNSRRLPQTNGWPLQLLSVA 128
Query: 64 AMLMASKYENNSKAPDVNFFVELSDETCSHEQILSMEKIILKKLEWNLSVPTPFVFLVRF 123
+ +A+K E ++ VE I ME ++L L+W L TPF FL F
Sbjct: 129 CLSLAAKMEETLVPSLLDLQVEGVKYMFEPITIRRMELLVLSVLDWRLRSVTPFSFLSFF 188