Miyakogusa Predicted Gene

Lj1g3v0969950.4

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0969950.4 Non Characterized Hit- tr|C6TJR8|C6TJR8_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.25564
PE,83.5,0,Ribulose-phoshate binding barrel,Ribulose-phosphate binding
barrel; SUBFAMILY NOT NAMED,NULL; 1-(5-P,CUFF.26721.4
         (308 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g015010.1 | aldolase-type TIM barrel family protein | HC |...   498   e-141

>Medtr2g015010.1 | aldolase-type TIM barrel family protein | HC |
           chr2:4408457-4401664 | 20130731
          Length = 312

 Score =  498 bits (1281), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 253/311 (81%), Positives = 269/311 (86%), Gaps = 6/311 (1%)

Query: 1   MRNLASAPS-----SLNFPIFHPNKLRSATLNPXXXXXXXXXXX-IQCAVRFCPCIDIHK 54
           MR+ AS PS       + PI   N L    LNP            IQC+V+F PCIDIHK
Sbjct: 1   MRSPASTPSIRGGAFASSPILRHNHLPFLRLNPPSSSPTRSSPPSIQCSVQFRPCIDIHK 60

Query: 55  GKVKQIVGSTLEDLKGDGGSEPVTNFESDKSAAEYATLYKQDGLTGGHVIMLGADPLSKA 114
           GKVKQIVGSTL+DLK D GS+P+TNFESDKSAAEYATLYKQDGL GGHVIMLGADP SKA
Sbjct: 61  GKVKQIVGSTLKDLKDDDGSDPITNFESDKSAAEYATLYKQDGLKGGHVIMLGADPFSKA 120

Query: 115 AAFEALHAYPGGLQVGGGINSDNCLSYIEEGASHVIVTSYVFNNGQMDLGRLKDLVRIVG 174
           A+ EALHAYPGGLQVGGGINSDNCLSYIEEGASHVIVTSYVFNNGQMDL RLKDLVRIVG
Sbjct: 121 ASLEALHAYPGGLQVGGGINSDNCLSYIEEGASHVIVTSYVFNNGQMDLERLKDLVRIVG 180

Query: 175 KERLVLDLSCRKKDGKYAIVTDRWQKFSDVSLDAEVMEFLASFADEFLVHGVDVEGKKLG 234
           KERLVLDLSCRKK+GKYAIVTDRWQKFSDVSLDA+VMEFLA+FADEFLVHGVDVEGKKLG
Sbjct: 181 KERLVLDLSCRKKEGKYAIVTDRWQKFSDVSLDAKVMEFLANFADEFLVHGVDVEGKKLG 240

Query: 235 IDEELVALLGKHSPIPVTYAGGVTVLADLERIKTAGMGRVDVTVGSALDIFGGSLAYQEV 294
           IDEELVALLGKHSPIPVTYAGGVTV+ DLERI+TAGM  VDVTVGSALDIFGG+LAY++V
Sbjct: 241 IDEELVALLGKHSPIPVTYAGGVTVMDDLERIRTAGMDNVDVTVGSALDIFGGNLAYKDV 300

Query: 295 VAWHNHQKASV 305
           VAWHN QK SV
Sbjct: 301 VAWHNQQKVSV 311