Miyakogusa Predicted Gene

Lj1g3v0969940.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0969940.1 Non Characterized Hit- tr|C6TJR8|C6TJR8_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.25564
PE,81.03,5e-19,SUBFAMILY NOT NAMED,NULL;
1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO]
IMIDAZOLE,CUFF.26720.1
         (67 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g015010.1 | aldolase-type TIM barrel family protein | HC |...   100   3e-22

>Medtr2g015010.1 | aldolase-type TIM barrel family protein | HC |
           chr2:4408457-4401664 | 20130731
          Length = 312

 Score =  100 bits (249), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 47/57 (82%), Positives = 52/57 (91%)

Query: 8   IPVTYAGGVTVLADLERIKTAGMGRVDVTVGSALDIFGGSLAYQEVVAWHNHQKASV 64
           IPVTYAGGVTV+ DLERI+TAGM  VDVTVGSALDIFGG+LAY++VVAWHN QK SV
Sbjct: 255 IPVTYAGGVTVMDDLERIRTAGMDNVDVTVGSALDIFGGNLAYKDVVAWHNQQKVSV 311